RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 FAM78BQ5VT40 261 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 ZNF562Q6V9R5 426 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 C5orf56Q8N8D9 126 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 OR11H1Q8NG94 326 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 OR1L4Q8NGR5 311 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 IL17DQ8TAD2 202 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 YPEL4Q96NS1 127 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 PFDN5Q99471 154 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 TMEM167BQ9NRX6 74 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 TECRQ9NZ01 308 aaKnown RBP9.81□□□□□ -0.84
SCAF1-202ENST00000595242 NAT8Q9UHE5 227 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 KLK9Q9UKQ9 250 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 MUC4Q99102 2169 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 LINC01548A6NM66 108 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 C11orf94C9JXX5 98 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 IGHG2P01859 326 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 HLA-DRB1P01911 266 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 FOLR2P14207 255 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 TMEM11P17152 192 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 HES1Q14469 280 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 FXYD3Q14802 87 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 MIR17HGQ75NE6 70 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 Q8N9W7 124 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 C4orf3Q8WVX3 66 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 C11orf52Q96A22 123 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 MISP3Q96FF7 219 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 SPATA25Q9BR10 227 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 C20orf24Q9BUV8 137 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 PARLQ9H300 379 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 TMEM242Q9NWH2 141 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 DNAH10Q8IVF4 4471 aa9.8□□□□□ -0.84
SCAF1-202ENST00000595242 CXorf65A6NEN9 183 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 ZNF727A8MUV8 499 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 CNIH1O95406 144 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 C8orf88P0DMB2 117 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 IGHV4-30-4P0DP06 118 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 GATA2P23769 480 aaPredicted RBP9.79□□□□□ -0.84
SCAF1-202ENST00000595242 CEBPGP53567 150 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 CX3CL1P78423 397 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 ASPHD1Q5U4P2 390 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 IQCF2Q8IXL9 164 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 TTC9CQ8N5M4 171 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 OR4X1Q8NH49 305 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 TMEM37Q8WXS4 190 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 LINC00476Q8WZB0 136 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 ARPC1AQ92747 370 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 ZNF503Q96F45 646 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 SMIM7Q9BQ49 75 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 DOK5Q9P104 306 aa9.79□□□□□ -0.84
SCAF1-202ENST00000595242 ELOA3CA0A087WX78 387 aaPredicted RBP9.78□□□□□ -0.84
SCAF1-202ENST00000595242 LOC105371267A0A1B0GV96 52 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 K7EIM0 57 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 LY6G6CO95867 125 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 NPPCP23582 126 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 ATP5G3P48201 142 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 FOXE3Q13461 319 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 RNF212Q495C1 297 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 PATE2Q6UY27 113 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 C19orf35Q6ZS72 473 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 RNF152Q8N8N0 203 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 HIST1H2BAQ96A08 127 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 FAM167A-AS1Q96KT0 104 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 DNAJC4Q9NNZ3 241 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 PRELID1Q9Y255 219 aa9.78□□□□□ -0.84
SCAF1-202ENST00000595242 YTHDF2Q9Y5A9 579 aaKnown RBP9.78□□□□□ -0.84
SCAF1-202ENST00000595242 IGLV11-55A0A075B6I3 123 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 IGHV7-81A0A0B4J1V7 117 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 AP4M1O00189 453 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 COX7A2P2O60397 106 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 SAP30O75446 220 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 MT-ND4LP03901 98 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 ELANEP08246 267 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 IGLC1P0CG04 106 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 AKR1C3P42330 323 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 NDPQ00604 133 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 ZNF90Q03938 601 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 TMEM241Q24JQ0 296 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 C10orf113Q5VZT2 155 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 SLC25A2Q9BXI2 301 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 CTDSP1Q9GZU7 261 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 C19orf73Q9NVV2 129 aa9.77□□□□□ -0.85
SCAF1-202ENST00000595242 A0A1W2PRE2 83 aa9.76□□□□□ -0.85
SCAF1-202ENST00000595242 A8MZ25 164 aa9.76□□□□□ -0.85
SCAF1-202ENST00000595242 EGR2P11161 476 aaPredicted RBP9.76□□□□□ -0.85
SCAF1-202ENST00000595242 UBE2G2P60604 165 aa9.76□□□□□ -0.85
SCAF1-202ENST00000595242 RPL23P62829 140 aaKnown RBP9.76□□□□□ -0.85
SCAF1-202ENST00000595242 AKIRIN2Q53H80 203 aa9.76□□□□□ -0.85
SCAF1-202ENST00000595242 Q8N1Y9 231 aa9.76□□□□□ -0.85
SCAF1-202ENST00000595242 OR1N2Q8NGR9 330 aa9.76□□□□□ -0.85
SCAF1-202ENST00000595242 RPUSD4Q96CM3 377 aaKnown RBP9.76□□□□□ -0.85
SCAF1-202ENST00000595242 FANCD2OSQ96PS1 177 aa9.76□□□□□ -0.85
SCAF1-202ENST00000595242 OVOL1O14753 267 aa9.75□□□□□ -0.85
SCAF1-202ENST00000595242 OR2C1O95371 312 aa9.75□□□□□ -0.85
SCAF1-202ENST00000595242 FABP1P07148 127 aa9.75□□□□□ -0.85
SCAF1-202ENST00000595242 APELAP0DMC3 54 aa9.75□□□□□ -0.85
SCAF1-202ENST00000595242 ATF4P18848 351 aaPredicted RBP9.75□□□□□ -0.85
SCAF1-202ENST00000595242 CST9LP1Q5W188 147 aa9.75□□□□□ -0.85
SCAF1-202ENST00000595242 TMEM68Q96MH6 324 aa9.75□□□□□ -0.85
SCAF1-202ENST00000595242 UHRF2Q96PU4 802 aa9.75□□□□□ -0.85
SCAF1-202ENST00000595242 ZNF355PQ9NSJ1 428 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms