RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 RNASE6Q93091 150 aaKnown RBP10.51□□□□□ -0.73
VRK3-209ENST00000594948 RASL11BQ9BPW5 248 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 AP5S1Q9NUS5 200 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 SVILO95425 2214 aa10.5□□□□□ -0.73
VRK3-209ENST00000594948 IGHV1-3A0A0C4DH29 117 aa10.5□□□□□ -0.73
VRK3-209ENST00000594948 H3BTX0 84 aa10.5□□□□□ -0.73
VRK3-209ENST00000594948 TOX4O94842 621 aa10.5□□□□□ -0.73
VRK3-209ENST00000594948 THBDP07204 575 aa10.5□□□□□ -0.73
VRK3-209ENST00000594948 SAPCD1Q5SSQ6 148 aa10.5□□□□□ -0.73
VRK3-209ENST00000594948 OR10AG1Q8NH19 301 aa10.5□□□□□ -0.73
VRK3-209ENST00000594948 SRSF12Q8WXF0 261 aaKnown RBP10.5□□□□□ -0.73
VRK3-209ENST00000594948 ZC2HC1AQ96GY0 325 aa10.5□□□□□ -0.73
VRK3-209ENST00000594948 ZNF747Q9BV97 191 aa10.5□□□□□ -0.73
VRK3-209ENST00000594948 TRAV8-1A0A0A6YYK1 113 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 IGHV3-72A0A0B4J1Y9 119 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 CNTFRP26992 372 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 PSG3Q16557 428 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 ANKRD39Q53RE8 183 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 LHFPL4Q7Z7J7 247 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 S100A7AQ86SG5 101 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 EXOC3-AS1Q8N2X6 119 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 JKAMPQ9P055 326 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 PSG8Q9UQ74 426 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 INSIG2Q9Y5U4 225 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 PLXNB1O43157 2135 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 NCOR1O75376 2440 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 MALRD1Q5VYJ5 2156 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 A0A0G2JNJ9 132 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 SERTM2A0A1B0GWG4 89 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 BUB1B-PAK6H3BSN5 160 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 IGKV1-17P01599 117 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 PPBPP02775 128 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 ARMS2P0C7Q2 107 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 SIGLEC15Q6ZMC9 328 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 FA2HQ7L5A8 372 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 ARL6IP6Q8N6S5 226 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 Q9UFV3 132 aa10.49□□□□□ -0.73
VRK3-209ENST00000594948 IGHV3-21A0A0B4J1V1 117 aa10.48□□□□□ -0.73
VRK3-209ENST00000594948 MUC21A0A0G2JKD1 596 aa10.48□□□□□ -0.73
VRK3-209ENST00000594948 MUC21A0A140T8X8 626 aa10.48□□□□□ -0.73
VRK3-209ENST00000594948 GPR183P32249 361 aa10.48□□□□□ -0.73
VRK3-209ENST00000594948 ARF6P62330 175 aa10.48□□□□□ -0.73
VRK3-209ENST00000594948 MUC21Q5SSG8 566 aa10.48□□□□□ -0.73
VRK3-209ENST00000594948 OR1N2Q8NGR9 330 aa10.48□□□□□ -0.73
VRK3-209ENST00000594948 RALYQ9UKM9 306 aaKnown RBP10.48□□□□□ -0.73
VRK3-209ENST00000594948 U3KQK5 164 aa10.48□□□□□ -0.73
VRK3-209ENST00000594948 MRPS12O15235 138 aaKnown RBP10.47□□□□□ -0.73
VRK3-209ENST00000594948 ZNF138P52744 262 aa10.47□□□□□ -0.73
VRK3-209ENST00000594948 SEC11AP67812 179 aa10.47□□□□□ -0.73
VRK3-209ENST00000594948 PDE6HQ13956 83 aa10.47□□□□□ -0.73
VRK3-209ENST00000594948 PRR31Q5SQ13 230 aa10.47□□□□□ -0.73
VRK3-209ENST00000594948 COX8CQ7Z4L0 72 aa10.47□□□□□ -0.73
VRK3-209ENST00000594948 PRSS33Q8NF86 280 aa10.47□□□□□ -0.73
VRK3-209ENST00000594948 DYNLRB1Q9NP97 96 aa10.47□□□□□ -0.73
VRK3-209ENST00000594948 FBLL1A6NHQ2 334 aaKnown RBP10.47□□□□□ -0.73
VRK3-209ENST00000594948 PRRG2O14669 202 aa10.47□□□□□ -0.73
VRK3-209ENST00000594948 PRSS3P2Q8NHM4 247 aa10.47□□□□□ -0.73
VRK3-209ENST00000594948 PEF1Q9UBV8 284 aaKnown RBP10.47□□□□□ -0.73
VRK3-209ENST00000594948 WI2-2373I1.2A0A1W2PRP0 233 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 LY6LH3BQJ8 138 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 K7EIM0 57 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 C21orf62-AS1Q17RA5 79 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 LGALS9BQ3B8N2 356 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 LGALS9CQ6DKI2 356 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 C2orf91Q6ZV80 131 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 ZNF491Q8N8L2 437 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 ZNF414Q96IQ9 312 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 ZNF48Q96MX3 618 aaPredicted RBP10.46□□□□□ -0.74
VRK3-209ENST00000594948 NPFFR1Q9GZQ6 430 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 RAB1BQ9H0U4 201 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 FBXL15Q9H469 300 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 TP73-AS1Q9UF72 201 aa10.46□□□□□ -0.74
VRK3-209ENST00000594948 OR2T8A6NH00 312 aa10.45□□□□□ -0.74
VRK3-209ENST00000594948 CSN3P07498 182 aa10.45□□□□□ -0.74
VRK3-209ENST00000594948 CRIP1P50238 77 aa10.45□□□□□ -0.74
VRK3-209ENST00000594948 RPEQ96AT9 228 aa10.45□□□□□ -0.74
VRK3-209ENST00000594948 RNF125Q96EQ8 232 aa10.45□□□□□ -0.74
VRK3-209ENST00000594948 APELAP0DMC3 54 aa10.44□□□□□ -0.74
VRK3-209ENST00000594948 CT45A10P0DMU9 189 aa10.44□□□□□ -0.74
VRK3-209ENST00000594948 APOBEC3AP31941 199 aaPredicted RBP10.44□□□□□ -0.74
VRK3-209ENST00000594948 A0A087X0K7 114 aa10.44□□□□□ -0.74
VRK3-209ENST00000594948 SHISA9B4DS77 424 aa10.44□□□□□ -0.74
VRK3-209ENST00000594948 SIVA1O15304 175 aa10.44□□□□□ -0.74
VRK3-209ENST00000594948 PLGLAQ15195 96 aa10.44□□□□□ -0.74
VRK3-209ENST00000594948 TMEM97Q5BJF2 176 aa10.44□□□□□ -0.74
VRK3-209ENST00000594948 FAM104BQ5XKR9 115 aa10.44□□□□□ -0.74
VRK3-209ENST00000594948 CST9LQ9H4G1 147 aa10.44□□□□□ -0.74
VRK3-209ENST00000594948 CELSR3Q9NYQ7 3312 aa10.43□□□□□ -0.74
VRK3-209ENST00000594948 A0A096LNJ9 63 aa10.43□□□□□ -0.74
VRK3-209ENST00000594948 B9A039 149 aa10.43□□□□□ -0.74
VRK3-209ENST00000594948 E7EQL1 145 aa10.43□□□□□ -0.74
VRK3-209ENST00000594948 FGF6P10767 208 aa10.43□□□□□ -0.74
VRK3-209ENST00000594948 PSG9Q00887 426 aa10.43□□□□□ -0.74
VRK3-209ENST00000594948 PSMG4Q5JS54 123 aa10.43□□□□□ -0.74
VRK3-209ENST00000594948 AMMECR1LQ6DCA0 310 aa10.43□□□□□ -0.74
VRK3-209ENST00000594948 Q71RC1 249 aaPredicted RBP10.43□□□□□ -0.74
VRK3-209ENST00000594948 AAMDCQ9H7C9 122 aa10.43□□□□□ -0.74
VRK3-209ENST00000594948 ZGRF1Q86YA3 2104 aa10.43□□□□□ -0.74
VRK3-209ENST00000594948 TMEM189A5PLL7 270 aa10.42□□□□□ -0.74
VRK3-209ENST00000594948 CBY3A6NI87 242 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms