RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 HOXA5P20719 270 aa10.3□□□□□ -0.76
VRK3-205ENST00000593919 PPIFP30405 207 aaKnown RBP10.3□□□□□ -0.76
VRK3-205ENST00000593919 TMEM86BQ8N661 226 aa10.3□□□□□ -0.76
VRK3-205ENST00000593919 OCC1Q8TAD7 63 aa10.3□□□□□ -0.76
VRK3-205ENST00000593919 C11orf52Q96A22 123 aa10.3□□□□□ -0.76
VRK3-205ENST00000593919 SFRP2Q96HF1 295 aa10.3□□□□□ -0.76
VRK3-205ENST00000593919 MS4A10Q96PG2 267 aa10.3□□□□□ -0.76
VRK3-205ENST00000593919 SLC25A2Q9BXI2 301 aa10.3□□□□□ -0.76
VRK3-205ENST00000593919 NPFFR1Q9GZQ6 430 aa10.3□□□□□ -0.76
VRK3-205ENST00000593919 DNAJC4Q9NNZ3 241 aa10.3□□□□□ -0.76
VRK3-205ENST00000593919 C21orf62Q9NYP8 219 aa10.3□□□□□ -0.76
VRK3-205ENST00000593919 PPP5D1E7EU14 171 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 F8W735 103 aaPredicted RBP10.29□□□□□ -0.76
VRK3-205ENST00000593919 IGHV3-23P01764 117 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 S100A9P06702 114 aaKnown RBP10.29□□□□□ -0.76
VRK3-205ENST00000593919 CD99P14209 185 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 SRD5A1P18405 259 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 CRYBB3P26998 211 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 C10orf113Q5VZT2 155 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 KCNIP4Q6PIL6 250 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 OR5AU1Q8NGC0 362 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 RNF2Q99496 336 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 PRSS22Q9GZN4 317 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 ZNF702PQ9H963 129 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 ESM1Q9NQ30 184 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 ARL2-SNX15V9GYD0 113 aa10.29□□□□□ -0.76
VRK3-205ENST00000593919 PPP1R2P9O14990 202 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 IGKV1-17P01599 117 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 MFAP4P55083 255 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 FAM3BP58499 235 aaPredicted RBP10.28□□□□□ -0.76
VRK3-205ENST00000593919 SELENOTP62341 195 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 UBE2L3P68036 154 aaKnown RBP10.28□□□□□ -0.76
VRK3-205ENST00000593919 SCGB2A2Q13296 93 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 Q71RC1 249 aaPredicted RBP10.28□□□□□ -0.76
VRK3-205ENST00000593919 OR1L4Q8NGR5 311 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 FAM167A-AS1Q96KT0 104 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 PFDN5Q99471 154 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 ZNF580Q9UK33 172 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 CDC42EP3Q9UKI2 254 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 FN1P02751 2386 aaKnown RBP10.28□□□□□ -0.76
VRK3-205ENST00000593919 SETD2Q9BYW2 2564 aaPredicted RBP10.28□□□□□ -0.76
VRK3-205ENST00000593919 GGTLC3B5MD39 225 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 PHOX2AO14813 284 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 GNG7O60262 68 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 GGCTO75223 188 aaKnown RBP10.28□□□□□ -0.76
VRK3-205ENST00000593919 CFHR3Q02985 330 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 TIGITQ495A1 244 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 PATE2Q6UY27 113 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 VN1R17PQ8TDU5 208 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 TCEAL7Q9BRU2 100 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 OR51M1Q9H341 326 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 NIT2Q9NQR4 276 aa10.28□□□□□ -0.76
VRK3-205ENST00000593919 K7EN84 100 aa10.27□□□□□ -0.77
VRK3-205ENST00000593919 TRGV3P03979 118 aa10.27□□□□□ -0.77
VRK3-205ENST00000593919 PYYP10082 97 aa10.27□□□□□ -0.77
VRK3-205ENST00000593919 CDX1P47902 265 aaPredicted RBP10.27□□□□□ -0.77
VRK3-205ENST00000593919 Q56UQ5 140 aa10.27□□□□□ -0.77
VRK3-205ENST00000593919 PDZD11Q5EBL8 140 aa10.27□□□□□ -0.77
VRK3-205ENST00000593919 GFI1BQ5VTD9 330 aa10.27□□□□□ -0.77
VRK3-205ENST00000593919 OR2T8A6NH00 312 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 IFITM10A6NMD0 228 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 H3BUA1 57 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 IGLV1-40P01703 118 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 TPPP2P59282 170 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 TEX38Q6PEX7 206 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 ZNF329Q86UD4 541 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 OR10G8Q8NGN5 311 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 ZNF502Q8TBZ5 544 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 FAM181BA6NEQ2 426 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 HELTA6NFD8 242 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 FAM223BA6NKX1 122 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 C9JCJ5 164 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 GATCO43716 136 aaKnown RBP10.26□□□□□ -0.77
VRK3-205ENST00000593919 PSG1P11464 419 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 ORM2P19652 201 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 FCGR2BP31994 310 aaPredicted RBP10.26□□□□□ -0.77
VRK3-205ENST00000593919 CENPWQ5EE01 88 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 FAM223AQ8IWN6 122 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 OR1B1Q8NGR6 318 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 CCDC140Q96MF4 163 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 PAXXQ9BUH6 204 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 KLK15Q9H2R5 256 aa10.26□□□□□ -0.77
VRK3-205ENST00000593919 TRAV30A0A087WSZ9 112 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 A0A1W2PRE2 83 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 BRI3O95415 125 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 SNRPCP09234 159 aaKnown RBP10.25□□□□□ -0.77
VRK3-205ENST00000593919 GNG4P50150 75 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 OR5I1Q13606 314 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 LCNL1Q6ZST4 164 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 LINC00305Q7Z4B0 112 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 Q8N2B8 174 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 TXN2Q99757 166 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 ZNF320A2RRD8 509 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 INAFM1C9JVW0 142 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 SLC17A3O00476 420 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 CTSGP08311 255 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 RD3LP0DJH9 198 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 GPR183P32249 361 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 ATP5G2Q06055 141 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 ANKRD39Q53RE8 183 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms