RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ATG101Q9BSB4 218 aa11.49□□□□□ -0.57
LIG1-205ENST00000593425 MRPS26Q9BYN8 205 aaKnown RBP11.49□□□□□ -0.57
LIG1-205ENST00000593425 RSL24D1Q9UHA3 163 aaKnown RBP11.49□□□□□ -0.57
LIG1-205ENST00000593425 LRP1BQ9NZR2 4599 aa11.48□□□□□ -0.57
LIG1-205ENST00000593425 WRBO00258 174 aa11.48□□□□□ -0.57
LIG1-205ENST00000593425 DUSP14O95147 198 aaKnown RBP11.48□□□□□ -0.57
LIG1-205ENST00000593425 DEFB130BP0DP73 79 aa11.48□□□□□ -0.57
LIG1-205ENST00000593425 DEFB130AP0DP74 79 aa11.48□□□□□ -0.57
LIG1-205ENST00000593425 AZU1P20160 251 aa11.48□□□□□ -0.57
LIG1-205ENST00000593425 FCN2Q15485 313 aa11.48□□□□□ -0.57
LIG1-205ENST00000593425 BPIFCQ8NFQ6 507 aa11.48□□□□□ -0.57
LIG1-205ENST00000593425 OR4D5Q8NGN0 318 aa11.48□□□□□ -0.57
LIG1-205ENST00000593425 ZNRF2Q8NHG8 242 aa11.48□□□□□ -0.57
LIG1-205ENST00000593425 SOSTQ9BQB4 213 aa11.48□□□□□ -0.57
LIG1-205ENST00000593425 TRAV12-2A0A075B6T6 113 aa11.47□□□□□ -0.57
LIG1-205ENST00000593425 NBDYA0A0U1RRE5 68 aa11.47□□□□□ -0.57
LIG1-205ENST00000593425 H3BP45 60 aa11.47□□□□□ -0.57
LIG1-205ENST00000593425 SYNGR2O43760 224 aa11.47□□□□□ -0.57
LIG1-205ENST00000593425 SLC25A6P12236 298 aa11.47□□□□□ -0.57
LIG1-205ENST00000593425 VAMP1P23763 118 aa11.47□□□□□ -0.57
LIG1-205ENST00000593425 FGL1Q08830 312 aa11.47□□□□□ -0.57
LIG1-205ENST00000593425 TMEM128Q5BJH2 165 aa11.47□□□□□ -0.57
LIG1-205ENST00000593425 LRTM2Q8N967 370 aa11.47□□□□□ -0.57
LIG1-205ENST00000593425 GPR82Q96P67 336 aa11.47□□□□□ -0.57
LIG1-205ENST00000593425 TMEM147Q9BVK8 224 aa11.47□□□□□ -0.57
LIG1-205ENST00000593425 SLC25A39Q9BZJ4 359 aaPredicted RBP11.47□□□□□ -0.57
LIG1-205ENST00000593425 PIGBOS1A0A0B4J2F0 54 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 C16orf90A8MZG2 172 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 F5H768 121 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 H3BRN7 92 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 BOLA2-SMG1P6H3BVE0 249 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 MED6O75586 246 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 NUDT3O95989 172 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 PRB4P10163 310 aaPredicted RBP11.46□□□□□ -0.57
LIG1-205ENST00000593425 TSPOP30536 169 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 TNFSF8P32971 234 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 AKR1C1Q04828 323 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 SPANXN5Q5MJ07 72 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 ACOT7LQ6ZUV0 252 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 RAB2BQ8WUD1 216 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 TRIM63Q969Q1 353 aa11.46□□□□□ -0.57
LIG1-205ENST00000593425 CIB3Q96Q77 187 aaPredicted RBP11.46□□□□□ -0.57
LIG1-205ENST00000593425 SLIRPQ9GZT3 109 aaKnown RBP11.46□□□□□ -0.57
LIG1-205ENST00000593425 FABP12A6NFH5 140 aa11.45□□□□□ -0.58
LIG1-205ENST00000593425 RPP30P78346 268 aaKnown RBP11.45□□□□□ -0.58
LIG1-205ENST00000593425 C6orf223Q8N319 242 aa11.45□□□□□ -0.58
LIG1-205ENST00000593425 ZNF738Q8NE65 137 aa11.45□□□□□ -0.58
LIG1-205ENST00000593425 HOXB5P09067 269 aa11.44□□□□□ -0.58
LIG1-205ENST00000593425 B2MP61769 119 aa11.44□□□□□ -0.58
LIG1-205ENST00000593425 HIST1H1AQ02539 215 aaPredicted RBP11.44□□□□□ -0.58
LIG1-205ENST00000593425 PPP1R1AQ13522 171 aa11.44□□□□□ -0.58
LIG1-205ENST00000593425 SHANK2-AS3Q9BTD1 123 aa11.44□□□□□ -0.58
LIG1-205ENST00000593425 LINC00588Q9Y4M8 146 aa11.44□□□□□ -0.58
LIG1-205ENST00000593425 CDK2AP2O75956 126 aa11.43□□□□□ -0.58
LIG1-205ENST00000593425 SFT2D2O95562 160 aa11.43□□□□□ -0.58
LIG1-205ENST00000593425 ATP5G1P05496 136 aa11.43□□□□□ -0.58
LIG1-205ENST00000593425 FAUP35544 74 aaKnown RBP11.43□□□□□ -0.58
LIG1-205ENST00000593425 ATP5G3P48201 142 aa11.43□□□□□ -0.58
LIG1-205ENST00000593425 CYP2G1PQ6ZSU1 146 aa11.43□□□□□ -0.58
LIG1-205ENST00000593425 TMEM144Q7Z5S9 345 aa11.43□□□□□ -0.58
LIG1-205ENST00000593425 OR8A1Q8NGG7 326 aa11.43□□□□□ -0.58
LIG1-205ENST00000593425 RNF141Q8WVD5 230 aa11.43□□□□□ -0.58
LIG1-205ENST00000593425 LINC01587Q99440 93 aa11.43□□□□□ -0.58
LIG1-205ENST00000593425 STRAPQ9Y3F4 350 aaKnown RBP11.43□□□□□ -0.58
LIG1-205ENST00000593425 APOBP04114 4563 aaKnown RBP11.43□□□□□ -0.58
LIG1-205ENST00000593425 SMCO3A2RU48 225 aa11.42□□□□□ -0.58
LIG1-205ENST00000593425 IL5P05113 134 aa11.42□□□□□ -0.58
LIG1-205ENST00000593425 CXCL3P19876 107 aa11.42□□□□□ -0.58
LIG1-205ENST00000593425 TMBIM6P55061 237 aa11.42□□□□□ -0.58
LIG1-205ENST00000593425 TOMM5Q8N4H5 51 aa11.42□□□□□ -0.58
LIG1-205ENST00000593425 MAPKAPK5-AS1Q8N8E1 139 aa11.42□□□□□ -0.58
LIG1-205ENST00000593425 UHRF2Q96PU4 802 aa11.42□□□□□ -0.58
LIG1-205ENST00000593425 HIGD1AQ9Y241 93 aa11.42□□□□□ -0.58
LIG1-205ENST00000593425 CBY3A6NI87 242 aa11.41□□□□□ -0.58
LIG1-205ENST00000593425 PMS2P5A8MQ11 134 aa11.41□□□□□ -0.58
LIG1-205ENST00000593425 RPL7P18124 248 aaKnown RBP11.41□□□□□ -0.58
LIG1-205ENST00000593425 S100A7P31151 101 aa11.41□□□□□ -0.58
LIG1-205ENST00000593425 CCL18P55774 89 aa11.41□□□□□ -0.58
LIG1-205ENST00000593425 TAS2R60P59551 318 aa11.41□□□□□ -0.58
LIG1-205ENST00000593425 RAP2BP61225 183 aa11.41□□□□□ -0.58
LIG1-205ENST00000593425 RHOBP62745 196 aa11.41□□□□□ -0.58
LIG1-205ENST00000593425 MCFD2Q8NI22 146 aa11.41□□□□□ -0.58
LIG1-205ENST00000593425 BCL7BQ9BQE9 202 aa11.41□□□□□ -0.58
LIG1-205ENST00000593425 A0A087X0K7 114 aa11.4□□□□□ -0.58
LIG1-205ENST00000593425 H3BMQ9 156 aa11.4□□□□□ -0.58
LIG1-205ENST00000593425 CCNKO75909 580 aa11.4□□□□□ -0.58
LIG1-205ENST00000593425 OR5G3P0C626 314 aa11.4□□□□□ -0.58
LIG1-205ENST00000593425 LINC00869P0C866 280 aa11.4□□□□□ -0.58
LIG1-205ENST00000593425 HTN1P15515 57 aa11.4□□□□□ -0.58
LIG1-205ENST00000593425 PLP1P60201 277 aa11.4□□□□□ -0.58
LIG1-205ENST00000593425 POLR2GP62487 172 aaKnown RBP eCLIP11.4□□□□□ -0.58
LIG1-205ENST00000593425 PSG3Q16557 428 aa11.4□□□□□ -0.58
LIG1-205ENST00000593425 TMEM256Q8N2U0 113 aa11.4□□□□□ -0.58
LIG1-205ENST00000593425 C16orf74Q96GX8 76 aa11.4□□□□□ -0.58
LIG1-205ENST00000593425 SLC25A21Q9BQT8 299 aaPredicted RBP11.4□□□□□ -0.58
LIG1-205ENST00000593425 V9GYH0 126 aa11.4□□□□□ -0.58
LIG1-205ENST00000593425 HYPMO75409 117 aa11.39□□□□□ -0.59
LIG1-205ENST00000593425 ADAP1O75689 374 aa11.39□□□□□ -0.59
LIG1-205ENST00000593425 AP3S2P59780 193 aa11.39□□□□□ -0.59
LIG1-205ENST00000593425 ID3Q02535 119 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms