RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 F5H768 121 aa12.26□□□□□ -0.45
RETREG3-212ENST00000593251 DUSP14O95147 198 aaKnown RBP12.26□□□□□ -0.45
RETREG3-212ENST00000593251 ALDH3B2P48448 385 aa12.26□□□□□ -0.45
RETREG3-212ENST00000593251 GGNBP1Q5YKI7 109 aa12.26□□□□□ -0.45
RETREG3-212ENST00000593251 GPR141Q7Z602 305 aa12.26□□□□□ -0.45
RETREG3-212ENST00000593251 ZNRF2Q8NHG8 242 aa12.26□□□□□ -0.45
RETREG3-212ENST00000593251 SLC25A39Q9BZJ4 359 aaPredicted RBP12.26□□□□□ -0.45
RETREG3-212ENST00000593251 PLAC8L1A1L4L8 177 aa12.25□□□□□ -0.45
RETREG3-212ENST00000593251 PRSS46E5RG02 174 aa12.25□□□□□ -0.45
RETREG3-212ENST00000593251 PRB4P10163 310 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-212ENST00000593251 TMED4Q7Z7H5 227 aa12.25□□□□□ -0.45
RETREG3-212ENST00000593251 C6orf223Q8N319 242 aa12.25□□□□□ -0.45
RETREG3-212ENST00000593251 MAPKAPK5-AS1Q8N8E1 139 aa12.25□□□□□ -0.45
RETREG3-212ENST00000593251 BPIFCQ8NFQ6 507 aa12.25□□□□□ -0.45
RETREG3-212ENST00000593251 OR1B1Q8NGR6 318 aa12.25□□□□□ -0.45
RETREG3-212ENST00000593251 RSL24D1Q9UHA3 163 aaKnown RBP12.25□□□□□ -0.45
RETREG3-212ENST00000593251 SLC45A2Q9UMX9 530 aa12.25□□□□□ -0.45
RETREG3-212ENST00000593251 WRBO00258 174 aa12.24□□□□□ -0.45
RETREG3-212ENST00000593251 CFDP00746 253 aaPredicted RBP12.24□□□□□ -0.45
RETREG3-212ENST00000593251 ZNF738Q8NE65 137 aa12.24□□□□□ -0.45
RETREG3-212ENST00000593251 TMEM147Q9BVK8 224 aa12.24□□□□□ -0.45
RETREG3-212ENST00000593251 APOBP04114 4563 aaKnown RBP12.23□□□□□ -0.45
RETREG3-212ENST00000593251 DUXBA0A1W2PPF3 345 aa12.23□□□□□ -0.45
RETREG3-212ENST00000593251 CDK2AP2O75956 126 aa12.23□□□□□ -0.45
RETREG3-212ENST00000593251 ATP5G1P05496 136 aa12.23□□□□□ -0.45
RETREG3-212ENST00000593251 ATP5G3P48201 142 aa12.23□□□□□ -0.45
RETREG3-212ENST00000593251 AKR1C1Q04828 323 aa12.23□□□□□ -0.45
RETREG3-212ENST00000593251 OR4D5Q8NGN0 318 aa12.23□□□□□ -0.45
RETREG3-212ENST00000593251 MRPS26Q9BYN8 205 aaKnown RBP12.23□□□□□ -0.45
RETREG3-212ENST00000593251 LINC00588Q9Y4M8 146 aa12.23□□□□□ -0.45
RETREG3-212ENST00000593251 H3BP45 60 aa12.22□□□□□ -0.45
RETREG3-212ENST00000593251 BOLA2-SMG1P6H3BVE0 249 aa12.22□□□□□ -0.45
RETREG3-212ENST00000593251 SYNGR2O43760 224 aa12.22□□□□□ -0.45
RETREG3-212ENST00000593251 MED6O75586 246 aa12.22□□□□□ -0.45
RETREG3-212ENST00000593251 HTN1P15515 57 aa12.22□□□□□ -0.45
RETREG3-212ENST00000593251 VAMP1P23763 118 aa12.22□□□□□ -0.45
RETREG3-212ENST00000593251 TSPOP30536 169 aa12.22□□□□□ -0.45
RETREG3-212ENST00000593251 S100A7P31151 101 aa12.22□□□□□ -0.45
RETREG3-212ENST00000593251 RPP30P78346 268 aaKnown RBP12.22□□□□□ -0.45
RETREG3-212ENST00000593251 HIST1H1AQ02539 215 aaPredicted RBP12.22□□□□□ -0.45
RETREG3-212ENST00000593251 SPANXN5Q5MJ07 72 aa12.22□□□□□ -0.45
RETREG3-212ENST00000593251 DYNC2LI1Q8TCX1 351 aa12.22□□□□□ -0.45
RETREG3-212ENST00000593251 GPR82Q96P67 336 aa12.22□□□□□ -0.45
RETREG3-212ENST00000593251 LINC01587Q99440 93 aa12.22□□□□□ -0.45
RETREG3-212ENST00000593251 H3BRN7 92 aa12.21□□□□□ -0.45
RETREG3-212ENST00000593251 CCL18P55774 89 aa12.21□□□□□ -0.45
RETREG3-212ENST00000593251 B2MP61769 119 aa12.21□□□□□ -0.45
RETREG3-212ENST00000593251 RHOBP62745 196 aa12.21□□□□□ -0.45
RETREG3-212ENST00000593251 TMEM128Q5BJH2 165 aa12.21□□□□□ -0.45
RETREG3-212ENST00000593251 ACOT7LQ6ZUV0 252 aa12.21□□□□□ -0.45
RETREG3-212ENST00000593251 RNF141Q8WVD5 230 aa12.21□□□□□ -0.45
RETREG3-212ENST00000593251 CIB3Q96Q77 187 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-212ENST00000593251 CCDC59Q9P031 241 aaKnown RBP12.21□□□□□ -0.45
RETREG3-212ENST00000593251 SMCO3A2RU48 225 aa12.2□□□□□ -0.46
RETREG3-212ENST00000593251 CBY3A6NI87 242 aa12.2□□□□□ -0.46
RETREG3-212ENST00000593251 HOXB5P09067 269 aa12.2□□□□□ -0.46
RETREG3-212ENST00000593251 SLC25A6P12236 298 aa12.2□□□□□ -0.46
RETREG3-212ENST00000593251 FAUP35544 74 aaKnown RBP12.2□□□□□ -0.46
RETREG3-212ENST00000593251 LRTM2Q8N967 370 aa12.2□□□□□ -0.46
RETREG3-212ENST00000593251 FABP12A6NFH5 140 aa12.19□□□□□ -0.46
RETREG3-212ENST00000593251 TNFSF8P32971 234 aa12.19□□□□□ -0.46
RETREG3-212ENST00000593251 OR8A1Q8NGG7 326 aa12.19□□□□□ -0.46
RETREG3-212ENST00000593251 RAB2BQ8WUD1 216 aa12.19□□□□□ -0.46
RETREG3-212ENST00000593251 UHRF2Q96PU4 802 aa12.19□□□□□ -0.46
RETREG3-212ENST00000593251 SOSTQ9BQB4 213 aa12.19□□□□□ -0.46
RETREG3-212ENST00000593251 SHANK2-AS3Q9BTD1 123 aa12.19□□□□□ -0.46
RETREG3-212ENST00000593251 PPP1R14DQ9NXH3 145 aa12.19□□□□□ -0.46
RETREG3-212ENST00000593251 HIGD1AQ9Y241 93 aa12.19□□□□□ -0.46
RETREG3-212ENST00000593251 IL5P05113 134 aa12.18□□□□□ -0.46
RETREG3-212ENST00000593251 CXCL3P19876 107 aa12.18□□□□□ -0.46
RETREG3-212ENST00000593251 PPP1R1AQ13522 171 aa12.18□□□□□ -0.46
RETREG3-212ENST00000593251 CLINT1Q14677 625 aa12.18□□□□□ -0.46
RETREG3-212ENST00000593251 CYP2G1PQ6ZSU1 146 aa12.18□□□□□ -0.46
RETREG3-212ENST00000593251 SSX7Q7RTT5 188 aa12.18□□□□□ -0.46
RETREG3-212ENST00000593251 SPATA12Q7Z6I5 190 aa12.18□□□□□ -0.46
RETREG3-212ENST00000593251 C16orf74Q96GX8 76 aa12.18□□□□□ -0.46
RETREG3-212ENST00000593251 STRAPQ9Y3F4 350 aaKnown RBP12.18□□□□□ -0.46
RETREG3-212ENST00000593251 DNAH5Q8TE73 4624 aa12.18□□□□□ -0.46
RETREG3-212ENST00000593251 SFT2D2O95562 160 aa12.17□□□□□ -0.46
RETREG3-212ENST00000593251 OR5G3P0C626 314 aa12.17□□□□□ -0.46
RETREG3-212ENST00000593251 RPL7P18124 248 aaKnown RBP12.17□□□□□ -0.46
RETREG3-212ENST00000593251 TMBIM6P55061 237 aa12.17□□□□□ -0.46
RETREG3-212ENST00000593251 TAS2R60P59551 318 aa12.17□□□□□ -0.46
RETREG3-212ENST00000593251 RAP2BP61225 183 aa12.17□□□□□ -0.46
RETREG3-212ENST00000593251 PSG3Q16557 428 aa12.17□□□□□ -0.46
RETREG3-212ENST00000593251 TMEM144Q7Z5S9 345 aa12.17□□□□□ -0.46
RETREG3-212ENST00000593251 TMEM256Q8N2U0 113 aa12.17□□□□□ -0.46
RETREG3-212ENST00000593251 BCL7BQ9BQE9 202 aa12.17□□□□□ -0.46
RETREG3-212ENST00000593251 NOP10Q9NPE3 64 aaKnown RBP12.17□□□□□ -0.46
RETREG3-212ENST00000593251 TIMM8BQ9Y5J9 83 aaPredicted RBP12.17□□□□□ -0.46
RETREG3-212ENST00000593251 HYPMO75409 117 aa12.16□□□□□ -0.46
RETREG3-212ENST00000593251 LINC00869P0C866 280 aa12.16□□□□□ -0.46
RETREG3-212ENST00000593251 AP3S2P59780 193 aa12.16□□□□□ -0.46
RETREG3-212ENST00000593251 TOMM5Q8N4H5 51 aa12.16□□□□□ -0.46
RETREG3-212ENST00000593251 LRRC20Q8TCA0 184 aa12.16□□□□□ -0.46
RETREG3-212ENST00000593251 TRIM63Q969Q1 353 aa12.16□□□□□ -0.46
RETREG3-212ENST00000593251 KRTAP1-5Q9BYS1 174 aa12.16□□□□□ -0.46
RETREG3-212ENST00000593251 SLIRPQ9GZT3 109 aaKnown RBP12.16□□□□□ -0.46
RETREG3-212ENST00000593251 Q9H8V8 135 aa12.16□□□□□ -0.46
RETREG3-212ENST00000593251 CCNKO75909 580 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms