RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 OR4D5Q8NGN0 318 aa7.94□□□□□ -1.14
LIG3-216ENST00000593099 C14orf144Q96I85 54 aa7.94□□□□□ -1.14
LIG3-216ENST00000593099 VPREB3Q9UKI3 123 aa7.94□□□□□ -1.14
LIG3-216ENST00000593099 PKD1L2Q7Z442 2459 aa7.94□□□□□ -1.14
LIG3-216ENST00000593099 TFF3Q07654 80 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 OR1N2Q8NGR9 330 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 AP5S1Q9NUS5 200 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 ATP6V0E1O15342 81 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 IGKV3-20P01619 116 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 CD5P06127 495 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 GATA2P23769 480 aaPredicted RBP7.93□□□□□ -1.14
LIG3-216ENST00000593099 OR10G8Q8NGN5 311 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 RNF166Q96A37 237 aaPredicted RBP7.93□□□□□ -1.14
LIG3-216ENST00000593099 FAM120AOSQ5T036 256 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 PGPEP1Q9NXJ5 209 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 DSCAMO60469 2012 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 EML6Q6ZMW3 1958 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 IGHV4-59P01825 116 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 GPX1P07203 203 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 CD33P20138 364 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 ANOS1P23352 680 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 ZNF585BQ52M93 769 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 C5orf47Q569G3 176 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 HIST1H2BAQ96A08 127 aa7.93□□□□□ -1.14
LIG3-216ENST00000593099 GCHFRP30047 84 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 ICAM4Q14773 271 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 FAM53AQ6NSI3 398 aaPredicted RBP7.92□□□□□ -1.14
LIG3-216ENST00000593099 OR2K2Q8NGT1 345 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 PMCHL2Q9BQD1 86 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 ANAPC10Q9UM13 185 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 TMSB15BA0A087X1C1 80 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 HLA-DRB1P01911 266 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 PRSS1P07477 247 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 NMBP08949 121 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 IGHV4-38-2P0DP08 117 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 NMUP48645 174 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 CMC4P56277 68 aaPredicted RBP7.92□□□□□ -1.14
LIG3-216ENST00000593099 FAM110DQ8TAY7 271 aaPredicted RBP7.92□□□□□ -1.14
LIG3-216ENST00000593099 RPRMQ9NS64 109 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 NAV3Q8IVL0 2385 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 CENPVL3A0A0U1RRI6 287 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 B5MCH6 92 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 PAX1P15863 534 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 LY6G6FQ5SQ64 297 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 BIVMQ86UB2 503 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 BBC3Q96PG8 261 aaPredicted RBP7.92□□□□□ -1.14
LIG3-216ENST00000593099 SSBP4Q9BWG4 385 aaPredicted RBP7.92□□□□□ -1.14
LIG3-216ENST00000593099 SH3BGRL3Q9H299 93 aa7.92□□□□□ -1.14
LIG3-216ENST00000593099 AREGP15514 252 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 CDKN1BP46527 198 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 ZNF134P52741 427 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 MEF2BQ02080 365 aaPredicted RBP7.91□□□□□ -1.14
LIG3-216ENST00000593099 GTSCR1Q86UQ5 136 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 H3BUT2 72 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 HOXA5P20719 270 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 OR11H4Q8NGC9 324 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 RCC1LQ96I51 464 aaKnown RBP7.91□□□□□ -1.14
LIG3-216ENST00000593099 SMDT1Q9H4I9 107 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 WDR83OSQ9Y284 106 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 HTTP42858 3142 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 CNTFRP26992 372 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 GOLT1AQ6ZVE7 132 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 WFDC11Q8NEX6 87 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 MAP1LC3AQ9H492 121 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 H3BQ15 152 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 SPINK4O60575 86 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 ZFP36P26651 326 aaKnown RBP7.91□□□□□ -1.14
LIG3-216ENST00000593099 HERVK_113P61574 105 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 RIGQ13278 110 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 SLC50A1Q9BRV3 221 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 LRRK2Q5S007 2527 aa7.91□□□□□ -1.14
LIG3-216ENST00000593099 SPANXN1Q5VSR9 72 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 ORAOV1Q8WV07 137 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 CST9LQ9H4G1 147 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 EDA2RQ9HAV5 297 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 A0A1W2PPI3 338 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 GAGE12JA6NER3 117 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 GAGE7O76087 117 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 NDUFB4O95168 129 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 HSPB1P04792 205 aaKnown RBP7.9□□□□□ -1.14
LIG3-216ENST00000593099 GAGE12FP0CL80 117 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 GAGE12GP0CL81 117 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 GAGE12IP0CL82 117 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 LMO4P61968 165 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 GAGE4Q13068 117 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 CDSNQ15517 529 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 RASL11AQ6T310 242 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 FNDC4Q9H6D8 234 aaPredicted RBP7.9□□□□□ -1.14
LIG3-216ENST00000593099 SPANXCQ9NY87 97 aa7.9□□□□□ -1.14
LIG3-216ENST00000593099 APOMO95445 188 aa7.9□□□□□ -1.15
LIG3-216ENST00000593099 DIAPH2-AS1Q14236 149 aa7.9□□□□□ -1.15
LIG3-216ENST00000593099 TMEM116Q8NCL8 245 aa7.9□□□□□ -1.15
LIG3-216ENST00000593099 RNF126Q9BV68 326 aa7.9□□□□□ -1.15
LIG3-216ENST00000593099 G3V318 75 aa7.9□□□□□ -1.15
LIG3-216ENST00000593099 TRGC1P0CF51 173 aa7.9□□□□□ -1.15
LIG3-216ENST00000593099 DNLZQ5SXM8 178 aa7.9□□□□□ -1.15
LIG3-216ENST00000593099 FOXI3A8MTJ6 420 aaPredicted RBP7.89□□□□□ -1.15
LIG3-216ENST00000593099 ELANEP08246 267 aa7.89□□□□□ -1.15
LIG3-216ENST00000593099 CAMPP49913 170 aa7.89□□□□□ -1.15
LIG3-216ENST00000593099 AMMECR1LQ6DCA0 310 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms