RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 SELENOTP62341 195 aa9.48□□□□□ -0.89
APOC1-209ENST00000592885 RRN3P1Q2M238 152 aa9.48□□□□□ -0.89
APOC1-209ENST00000592885 FAM222AQ5U5X8 452 aa9.48□□□□□ -0.89
APOC1-209ENST00000592885 C1orf158Q8N1D5 194 aa9.48□□□□□ -0.89
APOC1-209ENST00000592885 C20orf173Q96LM9 149 aa9.48□□□□□ -0.89
APOC1-209ENST00000592885 IGF2BP2-AS1Q96M15 143 aa9.48□□□□□ -0.89
APOC1-209ENST00000592885 RSG1Q9BU20 258 aa9.48□□□□□ -0.89
APOC1-209ENST00000592885 NDUFA13Q9P0J0 144 aa9.48□□□□□ -0.89
APOC1-209ENST00000592885 LOC102723971A0A1B0GUV8 181 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 ADAP1O75689 374 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 RPL7P18124 248 aaKnown RBP9.47□□□□□ -0.89
APOC1-209ENST00000592885 PLP1P60201 277 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 RAP2BP61225 183 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 B2MP61769 119 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 DLK1P80370 383 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 CNPY1Q3B7I2 92 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 AMTNQ6UX39 209 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 CYP2G1PQ6ZSU1 146 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 SMIM8Q96KF7 97 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 C17orf77Q96MU5 243 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 SHANK2-AS3Q9BTD1 123 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 SLC25A39Q9BZJ4 359 aaPredicted RBP9.47□□□□□ -0.89
APOC1-209ENST00000592885 PSENENQ9NZ42 101 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 HIGD1AQ9Y241 93 aa9.47□□□□□ -0.89
APOC1-209ENST00000592885 SMCO3A2RU48 225 aa9.46□□□□□ -0.9
APOC1-209ENST00000592885 CENPXA8MT69 81 aa9.46□□□□□ -0.9
APOC1-209ENST00000592885 K7EPK0 472 aa9.46□□□□□ -0.9
APOC1-209ENST00000592885 INSP01308 110 aa9.46□□□□□ -0.9
APOC1-209ENST00000592885 IL5P05113 134 aa9.46□□□□□ -0.9
APOC1-209ENST00000592885 OR4E1P0C645 316 aa9.46□□□□□ -0.9
APOC1-209ENST00000592885 GATA2P23769 480 aaPredicted RBP9.46□□□□□ -0.9
APOC1-209ENST00000592885 TAS2R30P59541 319 aa9.46□□□□□ -0.9
APOC1-209ENST00000592885 POLR2GP62487 172 aaKnown RBP eCLIP9.46□□□□□ -0.9
APOC1-209ENST00000592885 TMEM182Q6ZP80 229 aaPredicted RBP9.46□□□□□ -0.9
APOC1-209ENST00000592885 SCRT1Q9BWW7 348 aa9.46□□□□□ -0.9
APOC1-209ENST00000592885 YTHDF2Q9Y5A9 579 aaKnown RBP9.46□□□□□ -0.9
APOC1-209ENST00000592885 A0A087X0K7 114 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 PMS2P5A8MQ11 134 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 SSSCA1O60232 199 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 TSC22D2O75157 780 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 HYPMO75409 117 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 LINC00869P0C866 280 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 CNN1P51911 297 aaKnown RBP9.45□□□□□ -0.9
APOC1-209ENST00000592885 BAK1Q16611 211 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 LGALS9BQ3B8N2 356 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 PXDC1Q5TGL8 231 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 TMEM14EPQ6UXP3 125 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 OR11H7Q8NGC8 314 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 TMEM208Q9BTX3 173 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 NPVFQ9HCQ7 196 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 MGAT4CQ9UBM8 478 aa9.45□□□□□ -0.9
APOC1-209ENST00000592885 CXCL2P19875 107 aa9.44□□□□□ -0.9
APOC1-209ENST00000592885 TSPOP30536 169 aa9.44□□□□□ -0.9
APOC1-209ENST00000592885 RNF212Q495C1 297 aa9.44□□□□□ -0.9
APOC1-209ENST00000592885 C4orf46Q504U0 113 aa9.44□□□□□ -0.9
APOC1-209ENST00000592885 UBE2DNLQ8IWF7 75 aa9.44□□□□□ -0.9
APOC1-209ENST00000592885 OR10P1Q8NGE3 313 aa9.44□□□□□ -0.9
APOC1-209ENST00000592885 LYRM9A8MSI8 78 aa9.43□□□□□ -0.9
APOC1-209ENST00000592885 BOLA2-SMG1P6H3BVE0 249 aa9.43□□□□□ -0.9
APOC1-209ENST00000592885 BTCP35070 178 aa9.43□□□□□ -0.9
APOC1-209ENST00000592885 DAD1P61803 113 aa9.43□□□□□ -0.9
APOC1-209ENST00000592885 IAH1Q2TAA2 248 aaPredicted RBP9.43□□□□□ -0.9
APOC1-209ENST00000592885 TEPPQ6URK8 271 aa9.43□□□□□ -0.9
APOC1-209ENST00000592885 ZNF546Q86UE3 836 aa9.43□□□□□ -0.9
APOC1-209ENST00000592885 TMEM256Q8N2U0 113 aa9.43□□□□□ -0.9
APOC1-209ENST00000592885 C15orf53Q8NAA6 179 aa9.43□□□□□ -0.9
APOC1-209ENST00000592885 ZNF738Q8NE65 137 aa9.43□□□□□ -0.9
APOC1-209ENST00000592885 GGACTQ9BVM4 153 aa9.43□□□□□ -0.9
APOC1-209ENST00000592885 FLVCR2Q9UPI3 526 aa9.43□□□□□ -0.9
APOC1-209ENST00000592885 HERC2O95714 4834 aa9.42□□□□□ -0.9
APOC1-209ENST00000592885 CRXO43186 299 aaPredicted RBP9.42□□□□□ -0.9
APOC1-209ENST00000592885 OR5G3P0C626 314 aa9.42□□□□□ -0.9
APOC1-209ENST00000592885 METTL15P1P0C7V9 234 aa9.42□□□□□ -0.9
APOC1-209ENST00000592885 ANXA7P20073 488 aaKnown RBP9.42□□□□□ -0.9
APOC1-209ENST00000592885 FAM3BP58499 235 aaPredicted RBP9.42□□□□□ -0.9
APOC1-209ENST00000592885 FGL1Q08830 312 aa9.42□□□□□ -0.9
APOC1-209ENST00000592885 SPINK13Q1W4C9 94 aa9.42□□□□□ -0.9
APOC1-209ENST00000592885 GSG1LQ6UXU4 331 aa9.42□□□□□ -0.9
APOC1-209ENST00000592885 RNF182Q8N6D2 247 aa9.42□□□□□ -0.9
APOC1-209ENST00000592885 ZBTB8BQ8NAP8 495 aaPredicted RBP9.42□□□□□ -0.9
APOC1-209ENST00000592885 MITD1Q8WV92 249 aa9.42□□□□□ -0.9
APOC1-209ENST00000592885 RCL1Q9Y2P8 373 aaKnown RBP9.42□□□□□ -0.9
APOC1-209ENST00000592885 A0A1B0GVY2 172 aa9.41□□□□□ -0.9
APOC1-209ENST00000592885 M0R2Z0 102 aa9.41□□□□□ -0.9
APOC1-209ENST00000592885 CCNKO75909 580 aa9.41□□□□□ -0.9
APOC1-209ENST00000592885 SCGB1D2O95969 90 aa9.41□□□□□ -0.9
APOC1-209ENST00000592885 IL7P13232 177 aa9.41□□□□□ -0.9
APOC1-209ENST00000592885 CXCL3P19876 107 aa9.41□□□□□ -0.9
APOC1-209ENST00000592885 RRAS2P62070 204 aaPredicted RBP9.41□□□□□ -0.9
APOC1-209ENST00000592885 LCN15Q6UWW0 184 aa9.41□□□□□ -0.9
APOC1-209ENST00000592885 OR8A1Q8NGG7 326 aa9.41□□□□□ -0.9
APOC1-209ENST00000592885 UHRF2Q96PU4 802 aa9.41□□□□□ -0.9
APOC1-209ENST00000592885 SDHCQ99643 169 aaPredicted RBP9.41□□□□□ -0.9
APOC1-209ENST00000592885 SLC50A1Q9BRV3 221 aa9.41□□□□□ -0.9
APOC1-209ENST00000592885 ARL6Q9H0F7 186 aa9.41□□□□□ -0.9
APOC1-209ENST00000592885 ARV1Q9H2C2 271 aa9.41□□□□□ -0.9
APOC1-209ENST00000592885 HTN3P15516 51 aa9.4□□□□□ -0.9
APOC1-209ENST00000592885 HIST1H1AQ02539 215 aaPredicted RBP9.4□□□□□ -0.9
APOC1-209ENST00000592885 PSG3Q16557 428 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms