RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 IGHV4-28A0A0C4DH34 117 aa7.52□□□□□ -1.21
VPS4B-207ENST00000591519 C7orf66A4D0T2 115 aa7.52□□□□□ -1.21
VPS4B-207ENST00000591519 KNCNA6PVL3 124 aa7.52□□□□□ -1.21
VPS4B-207ENST00000591519 SSNA1O43805 119 aa7.52□□□□□ -1.21
VPS4B-207ENST00000591519 PRAF2O60831 178 aa7.52□□□□□ -1.21
VPS4B-207ENST00000591519 TOMM40O96008 361 aa7.52□□□□□ -1.21
VPS4B-207ENST00000591519 HNRNPCP07910 306 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS4B-207ENST00000591519 ZNF688P0C7X2 276 aa7.52□□□□□ -1.21
VPS4B-207ENST00000591519 PSG1P11464 419 aa7.52□□□□□ -1.21
VPS4B-207ENST00000591519 LYZP61626 148 aa7.52□□□□□ -1.21
VPS4B-207ENST00000591519 RAB32Q13637 225 aa7.52□□□□□ -1.21
VPS4B-207ENST00000591519 USF2Q15853 346 aaPredicted RBP7.52□□□□□ -1.21
VPS4B-207ENST00000591519 ACTL10Q5JWF8 245 aa7.52□□□□□ -1.21
VPS4B-207ENST00000591519 MARVELD1Q9BSK0 173 aa7.52□□□□□ -1.21
VPS4B-207ENST00000591519 FAM24AA6NFZ4 105 aa7.51□□□□□ -1.21
VPS4B-207ENST00000591519 SNRPGP15A8MWD9 76 aa7.51□□□□□ -1.21
VPS4B-207ENST00000591519 IGLL5B9A064 214 aa7.51□□□□□ -1.21
VPS4B-207ENST00000591519 PRSS46E5RG02 174 aa7.51□□□□□ -1.21
VPS4B-207ENST00000591519 NPIPB6E9PJ23 425 aa7.51□□□□□ -1.21
VPS4B-207ENST00000591519 BUB3O43684 328 aa7.51□□□□□ -1.21
VPS4B-207ENST00000591519 C4BPBP20851 252 aa7.51□□□□□ -1.21
VPS4B-207ENST00000591519 GATA2P23769 480 aaPredicted RBP7.51□□□□□ -1.21
VPS4B-207ENST00000591519 HLA-DMBP28068 263 aa7.51□□□□□ -1.21
VPS4B-207ENST00000591519 CAV2P51636 162 aa7.51□□□□□ -1.21
VPS4B-207ENST00000591519 ARL16Q0P5N6 197 aa7.51□□□□□ -1.21
VPS4B-207ENST00000591519 LRRC37A5PQ49AS3 106 aa7.51□□□□□ -1.21
VPS4B-207ENST00000591519 KRTAP17-1Q9BYP8 105 aa7.51□□□□□ -1.21
VPS4B-207ENST00000591519 IGKV1OR2-108A0A075B7D4 117 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 TRAV10A0A0B4J240 114 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 PMS2P5A8MQ11 134 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 CST7O76096 145 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 PVALBP20472 110 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-207ENST00000591519 TMEM14EPQ6UXP3 125 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 OR10P1Q8NGE3 313 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 PPP1R14BQ96C90 147 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 RNF125Q96EQ8 232 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 TRGV9Q99603 122 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 NRN1Q9NPD7 142 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 MGAT4CQ9UBM8 478 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 ALG5Q9Y673 324 aa7.5□□□□□ -1.21
VPS4B-207ENST00000591519 H3BMM0 161 aa7.49□□□□□ -1.21
VPS4B-207ENST00000591519 TSC22D2O75157 780 aa7.49□□□□□ -1.21
VPS4B-207ENST00000591519 FABP1P07148 127 aa7.49□□□□□ -1.21
VPS4B-207ENST00000591519 TAS2R30P59541 319 aa7.49□□□□□ -1.21
VPS4B-207ENST00000591519 NUTF2P61970 127 aaKnown RBP7.49□□□□□ -1.21
VPS4B-207ENST00000591519 SNRPD3P62318 126 aaKnown RBP7.49□□□□□ -1.21
VPS4B-207ENST00000591519 DLK1P80370 383 aa7.49□□□□□ -1.21
VPS4B-207ENST00000591519 PSMG4Q5JS54 123 aa7.49□□□□□ -1.21
VPS4B-207ENST00000591519 TMEM182Q6ZP80 229 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-207ENST00000591519 Q6ZTC4 211 aa7.49□□□□□ -1.21
VPS4B-207ENST00000591519 THAP8Q8NA92 274 aa7.49□□□□□ -1.21
VPS4B-207ENST00000591519 RNF126Q9BV68 326 aa7.49□□□□□ -1.21
VPS4B-207ENST00000591519 C1QTNF4Q9BXJ3 329 aa7.49□□□□□ -1.21
VPS4B-207ENST00000591519 CLEC5AQ9NY25 188 aa7.49□□□□□ -1.21
VPS4B-207ENST00000591519 DOK5Q9P104 306 aa7.49□□□□□ -1.21
VPS4B-207ENST00000591519 DNAH10Q8IVF4 4471 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 IGHV4-4A0A075B6R2 117 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 IGSF23A1L1A6 192 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 PTTG1O95997 202 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 ORM2P19652 201 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 SLC38A11Q08AI6 406 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 IL15RAQ13261 267 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 C12orf74Q32Q52 190 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 CYP2G1PQ6ZSU1 146 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 TMEM144Q7Z5S9 345 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 BPIFCQ8NFQ6 507 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 OR1B1Q8NGR6 318 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 CLUHP3Q96NS8 147 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 NEU1Q99519 415 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 C11orf1Q9H5F2 150 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 VPS13DQ5THJ4 4388 aa7.48□□□□□ -1.21
VPS4B-207ENST00000591519 SMIM9A6NGZ8 99 aa7.47□□□□□ -1.21
VPS4B-207ENST00000591519 RLN2P04090 185 aa7.47□□□□□ -1.21
VPS4B-207ENST00000591519 HLA-DRB4P13762 266 aa7.47□□□□□ -1.21
VPS4B-207ENST00000591519 H2BFSP57053 126 aa7.47□□□□□ -1.21
VPS4B-207ENST00000591519 C1orf194Q5T5A4 169 aa7.47□□□□□ -1.21
VPS4B-207ENST00000591519 LCE5AQ5TCM9 118 aa7.47□□□□□ -1.21
VPS4B-207ENST00000591519 SIGLEC15Q6ZMC9 328 aa7.47□□□□□ -1.21
VPS4B-207ENST00000591519 ZNF705AQ6ZN79 300 aaPredicted RBP7.47□□□□□ -1.21
VPS4B-207ENST00000591519 NMES1Q9C002 83 aa7.47□□□□□ -1.21
VPS4B-207ENST00000591519 OR5AC2Q9NZP5 309 aa7.47□□□□□ -1.21
VPS4B-207ENST00000591519 PFDN2Q9UHV9 154 aa7.47□□□□□ -1.21
VPS4B-207ENST00000591519 HLA-DRB4X5D2U9 266 aa7.47□□□□□ -1.21
VPS4B-207ENST00000591519 DEFB131BA0A096LNP1 70 aa7.46□□□□□ -1.22
VPS4B-207ENST00000591519 UBE2L5PA0A1B0GUS4 154 aa7.46□□□□□ -1.22
VPS4B-207ENST00000591519 ZNF705FA8MVS1 300 aaPredicted RBP7.46□□□□□ -1.22
VPS4B-207ENST00000591519 H0YIZ8 118 aa7.46□□□□□ -1.22
VPS4B-207ENST00000591519 AMBPP02760 352 aa7.46□□□□□ -1.22
VPS4B-207ENST00000591519 OR5G3P0C626 314 aa7.46□□□□□ -1.22
VPS4B-207ENST00000591519 LINC00869P0C866 280 aa7.46□□□□□ -1.22
VPS4B-207ENST00000591519 ZNF705DP0CH99 300 aaPredicted RBP7.46□□□□□ -1.22
VPS4B-207ENST00000591519 ZNF705BP0CI00 300 aaPredicted RBP7.46□□□□□ -1.22
VPS4B-207ENST00000591519 NUP62P37198 522 aaPredicted RBP7.46□□□□□ -1.22
VPS4B-207ENST00000591519 LINC00336Q6ZUF6 198 aa7.46□□□□□ -1.22
VPS4B-207ENST00000591519 STX12Q86Y82 276 aa7.46□□□□□ -1.22
VPS4B-207ENST00000591519 TMEM252Q8N6L7 170 aa7.46□□□□□ -1.22
VPS4B-207ENST00000591519 PPP1R1CQ8WVI7 109 aa7.46□□□□□ -1.22
VPS4B-207ENST00000591519 SLC25A22Q9H936 323 aa7.46□□□□□ -1.22
VPS4B-207ENST00000591519 NPVFQ9HCQ7 196 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms