RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 NCR2O95944 276 aa13.78□□□□□ -0.2
SMARCA4-215ENST00000590574 MS4A6AQ9H2W1 248 aa13.78□□□□□ -0.2
SMARCA4-215ENST00000590574 H3BUT2 72 aa13.77□□□□□ -0.2
SMARCA4-215ENST00000590574 MPV17L2Q567V2 206 aa13.77□□□□□ -0.2
SMARCA4-215ENST00000590574 FAM231DQ6ZW35 169 aa13.77□□□□□ -0.2
SMARCA4-215ENST00000590574 BPTFQ12830 3046 aa13.77□□□□□ -0.2
SMARCA4-215ENST00000590574 LOXP28300 417 aaPredicted RBP13.77□□□□□ -0.2
SMARCA4-215ENST00000590574 TEX43Q6ZNM6 134 aa13.77□□□□□ -0.2
SMARCA4-215ENST00000590574 SH2D1AO60880 128 aa13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 ATP5LO75964 103 aa13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 LHBP01229 141 aa13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 WT1P19544 449 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 FXYD5Q96DB9 178 aa13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 PIMREGQ9BSJ6 248 aa13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 M0R3E3 92 aa13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 LY6HO94772 140 aa13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 CEACAM8P31997 349 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 EML6Q6ZMW3 1958 aa13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 SPTBN2O15020 2390 aa13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 OR1N2Q8NGR9 330 aa13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 Q8TAT8 98 aa13.77□□□□□ -0.21
SMARCA4-215ENST00000590574 IGFL4Q6B9Z1 124 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 VMO1Q7Z5L0 202 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 FAM168AQ92567 244 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 IFI27L1Q96BM0 104 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 SHANK2-AS3Q9BTD1 123 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 ZNF492Q9P255 531 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 H3BVH4 76 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 C5orf64Q2M2E5 130 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 IGFL3Q6UXB1 125 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 SLC50A1Q9BRV3 221 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 ARMS2P0C7Q2 107 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 DDB2Q92466 427 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 FNDC4Q9H6D8 234 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 CADP27708 2225 aa13.76□□□□□ -0.21
SMARCA4-215ENST00000590574 PKDREJQ9NTG1 2253 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 TMEM238LA0A1B0GVL6 79 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 A6NJY4 79 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 IGLC2P0DOY2 106 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 IGLC3P0DOY3 106 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 EBLN2Q6P2I7 272 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 ASIPP42127 132 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 A0A087X0K7 114 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 LOC107984156A0A0G2JMH3 177 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 ARL17AQ8IVW1 177 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 YPEL4Q96NS1 127 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 NDUFA3O95167 84 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 P0C879 139 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 LYPD1Q8N2G4 141 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 POLEQ07864 2286 aa13.75□□□□□ -0.21
SMARCA4-215ENST00000590574 OR11H12B2RN74 326 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 OR11H1Q8NG94 326 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 OR11H2Q8NH07 326 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 DPF1Q92782 380 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 WISP2O76076 250 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 FAM74A4Q5TZK3 123 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 LINC00311Q8N616 119 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 THAP8Q8NA92 274 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 DKK4Q9UBT3 224 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 SPCS1Q9Y6A9 102 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 SFTPCP11686 197 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 C15orf32Q32M92 178 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 FAM106AQ4KMX7 169 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 AMMECR1LQ6DCA0 310 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 SCGB3A1Q96QR1 104 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 MRPS16Q9Y3D3 137 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 KMT2EQ8IZD2 1858 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 CIDEAO60543 219 aa13.74□□□□□ -0.21
SMARCA4-215ENST00000590574 BRWD1-AS2P59051 145 aa13.73□□□□□ -0.21
SMARCA4-215ENST00000590574 PRR30Q53SZ7 412 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-215ENST00000590574 SYT8Q8NBV8 401 aa13.73□□□□□ -0.21
SMARCA4-215ENST00000590574 TMEM190Q8WZ59 177 aa13.73□□□□□ -0.21
SMARCA4-215ENST00000590574 PPBPP02775 128 aa13.73□□□□□ -0.21
SMARCA4-215ENST00000590574 CT83Q5H943 113 aa13.73□□□□□ -0.21
SMARCA4-215ENST00000590574 ORAOV1Q8WV07 137 aa13.73□□□□□ -0.21
SMARCA4-215ENST00000590574 AMN1Q8IY45 258 aa13.73□□□□□ -0.21
SMARCA4-215ENST00000590574 NXT2Q9NPJ8 142 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-215ENST00000590574 RNASE4P34096 147 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-215ENST00000590574 IFI27P40305 119 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-215ENST00000590574 FAM159AQ6UWV7 190 aa13.73□□□□□ -0.21
SMARCA4-215ENST00000590574 IGHV3-11P01762 117 aa13.72□□□□□ -0.21
SMARCA4-215ENST00000590574 GUSBP1Q15486 140 aa13.72□□□□□ -0.21
SMARCA4-215ENST00000590574 OR4X2Q8NGF9 303 aa13.72□□□□□ -0.21
SMARCA4-215ENST00000590574 KIR2DL5BA0A0G2JN68 375 aa13.72□□□□□ -0.21
SMARCA4-215ENST00000590574 KIR2DL5BA0A0G2JPC4 375 aa13.72□□□□□ -0.21
SMARCA4-215ENST00000590574 IGKV3-20P01619 116 aa13.72□□□□□ -0.21
SMARCA4-215ENST00000590574 KIR2DL5AQ8N109 375 aa13.72□□□□□ -0.21
SMARCA4-215ENST00000590574 NPSP0C0P6 89 aa13.72□□□□□ -0.21
SMARCA4-215ENST00000590574 SMKR1H3BMG3 65 aa13.71□□□□□ -0.21
SMARCA4-215ENST00000590574 LDLRAD2Q5SZI1 272 aa13.71□□□□□ -0.21
SMARCA4-215ENST00000590574 MORN5Q5VZ52 161 aa13.71□□□□□ -0.21
SMARCA4-215ENST00000590574 DGAT2L7PQ6IED9 249 aa13.71□□□□□ -0.21
SMARCA4-215ENST00000590574 TMEM75Q8N9X5 138 aa13.71□□□□□ -0.21
SMARCA4-215ENST00000590574 C8orf49Q96NF6 230 aa13.71□□□□□ -0.21
SMARCA4-215ENST00000590574 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-215ENST00000590574 TTC9CQ8N5M4 171 aa13.71□□□□□ -0.21
SMARCA4-215ENST00000590574 ARHGAP21Q5T5U3 1957 aa13.71□□□□□ -0.22
SMARCA4-215ENST00000590574 ATP5J2P56134 94 aa13.71□□□□□ -0.22
SMARCA4-215ENST00000590574 IGFL2Q6UWQ7 119 aa13.71□□□□□ -0.22
SMARCA4-215ENST00000590574 TRBV19A0A075B6N1 114 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms