RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 SPTA1P02549 2419 aa16.54■□□□□ 0.24
ZNF554-203ENST00000590116 NBASA2RRP1 2371 aa16.53■□□□□ 0.24
ZNF554-203ENST00000590116 DLEU1O43261 78 aa16.53■□□□□ 0.24
ZNF554-203ENST00000590116 COL8A1P27658 744 aa16.53■□□□□ 0.24
ZNF554-203ENST00000590116 RBPMS2Q6ZRY4 209 aaKnown RBP16.53■□□□□ 0.24
ZNF554-203ENST00000590116 KLHDC1Q8N7A1 406 aa16.53■□□□□ 0.24
ZNF554-203ENST00000590116 OR8B3Q8NGG8 313 aa16.53■□□□□ 0.24
ZNF554-203ENST00000590116 OR8B2Q96RD0 313 aa16.53■□□□□ 0.24
ZNF554-203ENST00000590116 IGKV1-17P01599 117 aa16.53■□□□□ 0.24
ZNF554-203ENST00000590116 RBPJQ06330 500 aa16.53■□□□□ 0.24
ZNF554-203ENST00000590116 COL5A1-AS1Q5SY13 56 aa16.53■□□□□ 0.24
ZNF554-203ENST00000590116 HRNRQ86YZ3 2850 aaPredicted RBP16.52■□□□□ 0.24
ZNF554-203ENST00000590116 C2orf70A6NJV1 201 aa16.52■□□□□ 0.24
ZNF554-203ENST00000590116 MUC15Q8N387 334 aa16.52■□□□□ 0.24
ZNF554-203ENST00000590116 TMEM14CQ9P0S9 112 aa16.52■□□□□ 0.24
ZNF554-203ENST00000590116 TP73-AS1Q9UF72 201 aa16.52■□□□□ 0.24
ZNF554-203ENST00000590116 SOX21Q9Y651 276 aaPredicted RBP16.52■□□□□ 0.24
ZNF554-203ENST00000590116 FAM90A27PA6NNH2 459 aa16.52■□□□□ 0.23
ZNF554-203ENST00000590116 IGLV2-11P01706 119 aa16.52■□□□□ 0.23
ZNF554-203ENST00000590116 FBLN7Q53RD9 439 aa16.52■□□□□ 0.23
ZNF554-203ENST00000590116 GFRA4Q9GZZ7 299 aa16.52■□□□□ 0.23
ZNF554-203ENST00000590116 TIMM23O14925 209 aa16.51■□□□□ 0.23
ZNF554-203ENST00000590116 LINC00173Q6ZV60 143 aa16.51■□□□□ 0.23
ZNF554-203ENST00000590116 RBM14Q96PK6 669 aaKnown RBP16.51■□□□□ 0.23
ZNF554-203ENST00000590116 SIAH2O43255 324 aa16.51■□□□□ 0.23
ZNF554-203ENST00000590116 FOSL1P15407 271 aa16.51■□□□□ 0.23
ZNF554-203ENST00000590116 KLF17Q5JT82 389 aaPredicted RBP16.51■□□□□ 0.23
ZNF554-203ENST00000590116 HILPDAQ9Y5L2 63 aa16.51■□□□□ 0.23
ZNF554-203ENST00000590116 PTPRQQ9UMZ3 2332 aa16.5■□□□□ 0.23
ZNF554-203ENST00000590116 STPG4Q8N801 248 aa16.5■□□□□ 0.23
ZNF554-203ENST00000590116 LAMTOR2Q9Y2Q5 125 aa16.5■□□□□ 0.23
ZNF554-203ENST00000590116 GOLT1BQ9Y3E0 138 aa16.5■□□□□ 0.23
ZNF554-203ENST00000590116 A0A1W2PRD5 423 aa16.5■□□□□ 0.23
ZNF554-203ENST00000590116 A0A1W2PRF3 423 aa16.5■□□□□ 0.23
ZNF554-203ENST00000590116 A0A1W2PRM7 423 aa16.5■□□□□ 0.23
ZNF554-203ENST00000590116 NPIPB6E9PJ23 425 aa16.5■□□□□ 0.23
ZNF554-203ENST00000590116 LY6LH3BQJ8 138 aa16.5■□□□□ 0.23
ZNF554-203ENST00000590116 FAM120AOSQ5T036 256 aa16.5■□□□□ 0.23
ZNF554-203ENST00000590116 TRAV9-2A0A087WT02 112 aa16.49■□□□□ 0.23
ZNF554-203ENST00000590116 K7EIM0 57 aa16.49■□□□□ 0.23
ZNF554-203ENST00000590116 CHEK1O14757 476 aa16.49■□□□□ 0.23
ZNF554-203ENST00000590116 ZNF138P52744 262 aa16.49■□□□□ 0.23
ZNF554-203ENST00000590116 BCL6BQ8N143 479 aaPredicted RBP16.49■□□□□ 0.23
ZNF554-203ENST00000590116 VKORC1Q9BQB6 163 aa16.48■□□□□ 0.23
ZNF554-203ENST00000590116 ZNF785A8K8V0 405 aa16.48■□□□□ 0.23
ZNF554-203ENST00000590116 KLRD1Q13241 179 aa16.48■□□□□ 0.23
ZNF554-203ENST00000590116 ZNF672Q499Z4 452 aaPredicted RBP16.48■□□□□ 0.23
ZNF554-203ENST00000590116 TMEM70Q9BUB7 260 aa16.48■□□□□ 0.23
ZNF554-203ENST00000590116 IGHV1-24A0A0C4DH33 117 aa16.47■□□□□ 0.23
ZNF554-203ENST00000590116 TSPOP30536 169 aa16.47■□□□□ 0.23
ZNF554-203ENST00000590116 GAGE1Q13065 139 aa16.47■□□□□ 0.23
ZNF554-203ENST00000590116 SCNM1Q9BWG6 230 aa16.47■□□□□ 0.23
ZNF554-203ENST00000590116 TRBV19A0A075B6N1 114 aa16.47■□□□□ 0.23
ZNF554-203ENST00000590116 LOC102724200A0A096LPH7 203 aaPredicted RBP16.47■□□□□ 0.23
ZNF554-203ENST00000590116 IGLL1P15814 213 aa16.47■□□□□ 0.23
ZNF554-203ENST00000590116 FOXC1Q12948 553 aa16.47■□□□□ 0.23
ZNF554-203ENST00000590116 BPIFA4PQ86YQ2 179 aa16.47■□□□□ 0.23
ZNF554-203ENST00000590116 ZC2HC1AQ96GY0 325 aa16.47■□□□□ 0.23
ZNF554-203ENST00000590116 RNF5Q99942 180 aa16.47■□□□□ 0.23
ZNF554-203ENST00000590116 SHANK2-AS3Q9BTD1 123 aa16.47■□□□□ 0.23
ZNF554-203ENST00000590116 FAM231BA6NCW3 169 aa16.46■□□□□ 0.23
ZNF554-203ENST00000590116 HOXB4P17483 251 aaPredicted RBP16.46■□□□□ 0.23
ZNF554-203ENST00000590116 ARF6P62330 175 aa16.46■□□□□ 0.23
ZNF554-203ENST00000590116 FAM162BQ5T6X4 162 aa16.46■□□□□ 0.23
ZNF554-203ENST00000590116 OR4F17Q8NGA8 305 aa16.46■□□□□ 0.23
ZNF554-203ENST00000590116 LIPFP07098 398 aa16.46■□□□□ 0.23
ZNF554-203ENST00000590116 IL4P05112 153 aa16.45■□□□□ 0.22
ZNF554-203ENST00000590116 HINT1P49773 126 aaPredicted RBP16.45■□□□□ 0.22
ZNF554-203ENST00000590116 Q6ZVH6 145 aa16.45■□□□□ 0.22
ZNF554-203ENST00000590116 CHCHD1Q96BP2 118 aaKnown RBP16.45■□□□□ 0.22
ZNF554-203ENST00000590116 H3BRN7 92 aa16.45■□□□□ 0.22
ZNF554-203ENST00000590116 APOHP02749 345 aaPredicted RBP16.45■□□□□ 0.22
ZNF554-203ENST00000590116 HTR1DP28221 377 aa16.45■□□□□ 0.22
ZNF554-203ENST00000590116 MCRIP2Q9BUT9 160 aaKnown RBP16.45■□□□□ 0.22
ZNF554-203ENST00000590116 TIMM8BQ9Y5J9 83 aaPredicted RBP16.45■□□□□ 0.22
ZNF554-203ENST00000590116 M0R3E3 92 aa16.44■□□□□ 0.22
ZNF554-203ENST00000590116 NBR2O15453 112 aa16.44■□□□□ 0.22
ZNF554-203ENST00000590116 HLA-DRB1P01911 266 aa16.44■□□□□ 0.22
ZNF554-203ENST00000590116 LINC00614P0C842 121 aa16.44■□□□□ 0.22
ZNF554-203ENST00000590116 SIGLEC15Q6ZMC9 328 aa16.44■□□□□ 0.22
ZNF554-203ENST00000590116 ZNF491Q8N8L2 437 aa16.44■□□□□ 0.22
ZNF554-203ENST00000590116 RNF125Q96EQ8 232 aa16.44■□□□□ 0.22
ZNF554-203ENST00000590116 SRSF8Q9BRL6 282 aaKnown RBP16.44■□□□□ 0.22
ZNF554-203ENST00000590116 HAX1O00165 279 aa16.44■□□□□ 0.22
ZNF554-203ENST00000590116 NDUFB8O95169 186 aa16.44■□□□□ 0.22
ZNF554-203ENST00000590116 ZFP30Q9Y2G7 519 aa16.44■□□□□ 0.22
ZNF554-203ENST00000590116 OVOL3O00110 214 aa16.43■□□□□ 0.22
ZNF554-203ENST00000590116 LEPROTL1O95214 131 aa16.43■□□□□ 0.22
ZNF554-203ENST00000590116 CSN3P07498 182 aa16.43■□□□□ 0.22
ZNF554-203ENST00000590116 CDSNQ15517 529 aa16.43■□□□□ 0.22
ZNF554-203ENST00000590116 NDFIP1Q9BT67 221 aa16.43■□□□□ 0.22
ZNF554-203ENST00000590116 TPPP3Q9BW30 176 aa16.43■□□□□ 0.22
ZNF554-203ENST00000590116 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.43■□□□□ 0.22
ZNF554-203ENST00000590116 ARMS2P0C7Q2 107 aa16.43■□□□□ 0.22
ZNF554-203ENST00000590116 FCGR2BP31994 310 aaPredicted RBP16.43■□□□□ 0.22
ZNF554-203ENST00000590116 C16orf54Q6UWD8 224 aa16.43■□□□□ 0.22
ZNF554-203ENST00000590116 TMEM75Q8N9X5 138 aa16.43■□□□□ 0.22
ZNF554-203ENST00000590116 DPM3Q9P2X0 92 aa16.43■□□□□ 0.22
ZNF554-203ENST00000590116 OR4C46A6NHA9 309 aa16.42■□□□□ 0.22
ZNF554-203ENST00000590116 H0Y8G0 127 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms