RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 A0A1W2PPV4 95 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 IZUMO1RA6ND01 250 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 TSPAN4O14817 238 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 SPP1P10451 314 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 RPL7P18124 248 aaKnown RBP10.26□□□□□ -0.77
VMP1-210ENST00000589823 GALR1P47211 349 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 RHOBP62745 196 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 AKR1C8PQ5T2L2 129 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 FAM90A2PQ658T7 463 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 OR10G4Q8NGN3 311 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 OR10G9Q8NGN4 311 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 OR10G7Q8NGN6 311 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 STOML3Q8TAV4 291 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 SPAG8Q99932 426 aaPredicted RBP10.26□□□□□ -0.77
VMP1-210ENST00000589823 PKD1L1Q8TDX9 2849 aa10.26□□□□□ -0.77
VMP1-210ENST00000589823 DNASE2O00115 360 aaPredicted RBP10.25□□□□□ -0.77
VMP1-210ENST00000589823 SEC11BP0C7V7 166 aa10.25□□□□□ -0.77
VMP1-210ENST00000589823 RAB2AP61019 212 aa10.25□□□□□ -0.77
VMP1-210ENST00000589823 EGFEM1PQ0D2K5 195 aa10.25□□□□□ -0.77
VMP1-210ENST00000589823 TMEM41BQ5BJD5 291 aa10.25□□□□□ -0.77
VMP1-210ENST00000589823 EIF5AL1Q6IS14 154 aaKnown RBP10.25□□□□□ -0.77
VMP1-210ENST00000589823 BPIFA4PQ86YQ2 179 aa10.25□□□□□ -0.77
VMP1-210ENST00000589823 GBGT1Q8N5D6 347 aa10.25□□□□□ -0.77
VMP1-210ENST00000589823 STXBP6Q8NFX7 210 aa10.25□□□□□ -0.77
VMP1-210ENST00000589823 SEPSECSQ9HD40 501 aaKnown RBP10.25□□□□□ -0.77
VMP1-210ENST00000589823 FUT9Q9Y231 359 aa10.25□□□□□ -0.77
VMP1-210ENST00000589823 ZNF256Q9Y2P7 627 aaPredicted RBP10.25□□□□□ -0.77
VMP1-210ENST00000589823 NOTCH3Q9UM47 2321 aa10.25□□□□□ -0.77
VMP1-210ENST00000589823 OR4C46A6NHA9 309 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 ZNF785A8K8V0 405 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 BOLA2-SMG1P6H3BVE0 249 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 GP9P14770 177 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 ATF4P18848 351 aaPredicted RBP10.24□□□□□ -0.77
VMP1-210ENST00000589823 TFPI2P48307 235 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 TAS2R45P59539 299 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 BEAN1Q3B7T3 259 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 MORN5Q5VZ52 161 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 SPATA31B1PQ5VZV4 182 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 FAM122CQ6P4D5 195 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 MIR17HGQ75NE6 70 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 WFDC3Q8IUB2 231 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 MS4A6AQ9H2W1 248 aa10.24□□□□□ -0.77
VMP1-210ENST00000589823 TRAV2A0A0B4J234 112 aa10.23□□□□□ -0.77
VMP1-210ENST00000589823 TRAV5A0A0B4J249 113 aa10.23□□□□□ -0.77
VMP1-210ENST00000589823 CDC34P49427 236 aaPredicted RBP10.23□□□□□ -0.77
VMP1-210ENST00000589823 GTSCR1Q86UQ5 136 aa10.23□□□□□ -0.77
VMP1-210ENST00000589823 ACTR3CQ9C0K3 210 aaPredicted RBP10.23□□□□□ -0.77
VMP1-210ENST00000589823 NRN1Q9NPD7 142 aa10.23□□□□□ -0.77
VMP1-210ENST00000589823 MGAM2Q2M2H8 2515 aa10.22□□□□□ -0.77
VMP1-210ENST00000589823 UMAD1C9J7I0 102 aa10.22□□□□□ -0.77
VMP1-210ENST00000589823 MEOX2P50222 304 aa10.22□□□□□ -0.77
VMP1-210ENST00000589823 KRTAP10-11P60412 298 aa10.22□□□□□ -0.77
VMP1-210ENST00000589823 KHDC3LQ587J8 217 aa10.22□□□□□ -0.77
VMP1-210ENST00000589823 KPRPQ5T749 579 aaPredicted RBP10.22□□□□□ -0.77
VMP1-210ENST00000589823 SAMD13Q5VXD3 122 aa10.22□□□□□ -0.77
VMP1-210ENST00000589823 RPP25LQ8N5L8 163 aaKnown RBP10.22□□□□□ -0.77
VMP1-210ENST00000589823 TMED6Q8WW62 240 aa10.22□□□□□ -0.77
VMP1-210ENST00000589823 SLC25A2Q9BXI2 301 aa10.22□□□□□ -0.77
VMP1-210ENST00000589823 RPRMQ9NS64 109 aa10.22□□□□□ -0.77
VMP1-210ENST00000589823 BOLA1Q9Y3E2 137 aa10.22□□□□□ -0.77
VMP1-210ENST00000589823 SMAD5-AS1Q9Y6J3 95 aa10.22□□□□□ -0.77
VMP1-210ENST00000589823 OR7C2O60412 319 aa10.21□□□□□ -0.77
VMP1-210ENST00000589823 LRRC20Q8TCA0 184 aa10.21□□□□□ -0.77
VMP1-210ENST00000589823 PRR25Q96S07 402 aa10.21□□□□□ -0.77
VMP1-210ENST00000589823 PAXXQ9BUH6 204 aa10.21□□□□□ -0.77
VMP1-210ENST00000589823 OR51M1Q9H341 326 aa10.21□□□□□ -0.77
VMP1-210ENST00000589823 TMEM14CQ9P0S9 112 aa10.21□□□□□ -0.77
VMP1-210ENST00000589823 A0A087X0K7 114 aa10.2□□□□□ -0.78
VMP1-210ENST00000589823 K7EQG2 157 aa10.2□□□□□ -0.78
VMP1-210ENST00000589823 MRPS12O15235 138 aaKnown RBP10.2□□□□□ -0.78
VMP1-210ENST00000589823 CMC4P56277 68 aaPredicted RBP10.2□□□□□ -0.78
VMP1-210ENST00000589823 CD81P60033 236 aa10.2□□□□□ -0.78
VMP1-210ENST00000589823 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.2□□□□□ -0.78
VMP1-210ENST00000589823 DCANP1Q8TF63 244 aa10.2□□□□□ -0.78
VMP1-210ENST00000589823 RAB24Q969Q5 203 aa10.2□□□□□ -0.78
VMP1-210ENST00000589823 FAM167A-AS1Q96KT0 104 aa10.2□□□□□ -0.78
VMP1-210ENST00000589823 C16orf92Q96LL3 132 aa10.2□□□□□ -0.78
VMP1-210ENST00000589823 DNAH3Q8TD57 4116 aa10.2□□□□□ -0.78
VMP1-210ENST00000589823 CTXND1A0A1B0GTU2 59 aa10.19□□□□□ -0.78
VMP1-210ENST00000589823 HMGB3O15347 200 aaKnown RBP10.19□□□□□ -0.78
VMP1-210ENST00000589823 EIF3GO75821 320 aaKnown RBP eCLIP10.19□□□□□ -0.78
VMP1-210ENST00000589823 CD7P09564 240 aa10.19□□□□□ -0.78
VMP1-210ENST00000589823 PYYP10082 97 aa10.19□□□□□ -0.78
VMP1-210ENST00000589823 HIST1H1EP10412 219 aaKnown RBP10.19□□□□□ -0.78
VMP1-210ENST00000589823 ID1P41134 155 aa10.19□□□□□ -0.78
VMP1-210ENST00000589823 RAB5CP51148 216 aa10.19□□□□□ -0.78
VMP1-210ENST00000589823 SNRPD3P62318 126 aaKnown RBP10.19□□□□□ -0.78
VMP1-210ENST00000589823 GUK1Q16774 197 aa10.19□□□□□ -0.78
VMP1-210ENST00000589823 LCN15Q6UWW0 184 aa10.19□□□□□ -0.78
VMP1-210ENST00000589823 DPPA3Q6W0C5 159 aa10.19□□□□□ -0.78
VMP1-210ENST00000589823 PQLC2Q6ZP29 291 aa10.19□□□□□ -0.78
VMP1-210ENST00000589823 RNF141Q8WVD5 230 aa10.19□□□□□ -0.78
VMP1-210ENST00000589823 PHYHIPLQ96FC7 376 aa10.19□□□□□ -0.78
VMP1-210ENST00000589823 HRH4Q9H3N8 390 aa10.19□□□□□ -0.78
VMP1-210ENST00000589823 SNRPCP09234 159 aaKnown RBP10.18□□□□□ -0.78
VMP1-210ENST00000589823 ZNF688P0C7X2 276 aa10.18□□□□□ -0.78
VMP1-210ENST00000589823 STAG3L2P0CL84 134 aa10.18□□□□□ -0.78
VMP1-210ENST00000589823 STAG3L3P0CL85 134 aa10.18□□□□□ -0.78
VMP1-210ENST00000589823 IGLC2P0DOY2 106 aa10.18□□□□□ -0.78
VMP1-210ENST00000589823 UBE2L3P68036 154 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms