RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 PEA15Q15121 130 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 C10orf113Q5VZT2 155 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 TMEM37Q8WXS4 190 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 TREM1Q9NP99 234 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 DOK5Q9P104 306 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 IGHV3-35A0A0C4DH35 117 aa15.31■□□□□ 0.04
ATG4D-208ENST00000588667 RBFOX3A6NFN3 312 aa15.31■□□□□ 0.04
ATG4D-208ENST00000588667 HYPMO75409 117 aa15.31■□□□□ 0.04
ATG4D-208ENST00000588667 IFNA1P01562 189 aa15.31■□□□□ 0.04
ATG4D-208ENST00000588667 CSN3P07498 182 aa15.31■□□□□ 0.04
ATG4D-208ENST00000588667 TAS2R45P59539 299 aa15.31■□□□□ 0.04
ATG4D-208ENST00000588667 PMS2P11Q13670 270 aa15.31■□□□□ 0.04
ATG4D-208ENST00000588667 TOR2AQ5JU69 321 aa15.31■□□□□ 0.04
ATG4D-208ENST00000588667 OR51G1Q8NGK1 321 aa15.31■□□□□ 0.04
ATG4D-208ENST00000588667 OR1B1Q8NGR6 318 aa15.31■□□□□ 0.04
ATG4D-208ENST00000588667 TECRQ9NZ01 308 aaKnown RBP15.31■□□□□ 0.04
ATG4D-208ENST00000588667 GNG13Q9P2W3 67 aa15.31■□□□□ 0.04
ATG4D-208ENST00000588667 ZNF320A2RRD8 509 aa15.3■□□□□ 0.04
ATG4D-208ENST00000588667 NDUFA4O00483 81 aa15.3■□□□□ 0.04
ATG4D-208ENST00000588667 CD5P06127 495 aa15.3■□□□□ 0.04
ATG4D-208ENST00000588667 ORM2P19652 201 aa15.3■□□□□ 0.04
ATG4D-208ENST00000588667 PSMB3P49720 205 aa15.3■□□□□ 0.04
ATG4D-208ENST00000588667 KRTAP10-11P60412 298 aa15.3■□□□□ 0.04
ATG4D-208ENST00000588667 RELQ04864 619 aaPredicted RBP15.3■□□□□ 0.04
ATG4D-208ENST00000588667 UNQ9165/PRO28630Q6UXU0 137 aa15.3■□□□□ 0.04
ATG4D-208ENST00000588667 IQCF2Q8IXL9 164 aa15.3■□□□□ 0.04
ATG4D-208ENST00000588667 Q8WTZ3 238 aa15.3■□□□□ 0.04
ATG4D-208ENST00000588667 TMEM190Q8WZ59 177 aa15.3■□□□□ 0.04
ATG4D-208ENST00000588667 NARS2Q96I59 477 aaKnown RBP15.3■□□□□ 0.04
ATG4D-208ENST00000588667 SMDT1Q9H4I9 107 aa15.3■□□□□ 0.04
ATG4D-208ENST00000588667 C2orf70A6NJV1 201 aa15.29■□□□□ 0.04
ATG4D-208ENST00000588667 KRBOX1C9JBD0 128 aa15.29■□□□□ 0.04
ATG4D-208ENST00000588667 PPT1P50897 306 aa15.29■□□□□ 0.04
ATG4D-208ENST00000588667 SRSF3P84103 164 aaKnown RBP15.29■□□□□ 0.04
ATG4D-208ENST00000588667 SPATA31B1PQ5VZV4 182 aa15.29■□□□□ 0.04
ATG4D-208ENST00000588667 MIR17HGQ75NE6 70 aa15.29■□□□□ 0.04
ATG4D-208ENST00000588667 TMEM231Q9H6L2 316 aa15.29■□□□□ 0.04
ATG4D-208ENST00000588667 IGLV1-51P01701 117 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 ARL14EPLP0DKL9 152 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 TAGLN2P37802 199 aaKnown RBP15.28■□□□□ 0.04
ATG4D-208ENST00000588667 LYZP61626 148 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 HAGHQ16775 308 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 KHDC3LQ587J8 217 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 PATE2Q6UY27 113 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 SCRT1Q9BWW7 348 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 MANBALQ9NQG1 85 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 UFC1Q9Y3C8 167 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 TMEM213A2RRL7 107 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 C8orf88P0DMB2 117 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 PQLC2Q6ZP29 291 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 LINC00305Q7Z4B0 112 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 AURKAIP1Q9NWT8 199 aaPredicted RBP15.28■□□□□ 0.04
ATG4D-208ENST00000588667 HIGD1AQ9Y241 93 aa15.28■□□□□ 0.04
ATG4D-208ENST00000588667 PRB2P02812 416 aaPredicted RBP15.27■□□□□ 0.03
ATG4D-208ENST00000588667 BCL2P10415 239 aa15.27■□□□□ 0.03
ATG4D-208ENST00000588667 ZNF506Q5JVG8 444 aa15.27■□□□□ 0.03
ATG4D-208ENST00000588667 S100A7AQ86SG5 101 aa15.27■□□□□ 0.03
ATG4D-208ENST00000588667 RNF125Q96EQ8 232 aa15.27■□□□□ 0.03
ATG4D-208ENST00000588667 ZNF414Q96IQ9 312 aa15.27■□□□□ 0.03
ATG4D-208ENST00000588667 TMPRSS5Q9H3S3 457 aa15.27■□□□□ 0.03
ATG4D-208ENST00000588667 LOC102723971A0A1B0GUV8 181 aa15.26■□□□□ 0.03
ATG4D-208ENST00000588667 TMEM218A2RU14 115 aa15.26■□□□□ 0.03
ATG4D-208ENST00000588667 IL4P05112 153 aa15.26■□□□□ 0.03
ATG4D-208ENST00000588667 FOLR2P14207 255 aa15.26■□□□□ 0.03
ATG4D-208ENST00000588667 ADAMTSL5Q6ZMM2 481 aa15.26■□□□□ 0.03
ATG4D-208ENST00000588667 ZNF600Q6ZNG1 722 aa15.26■□□□□ 0.03
ATG4D-208ENST00000588667 UHRF2Q96PU4 802 aa15.26■□□□□ 0.03
ATG4D-208ENST00000588667 RARRES2Q99969 163 aa15.26■□□□□ 0.03
ATG4D-208ENST00000588667 DAZ1Q9NQZ3 744 aaKnown RBP15.26■□□□□ 0.03
ATG4D-208ENST00000588667 WI2-2373I1.2A0A1W2PRP0 233 aa15.25■□□□□ 0.03
ATG4D-208ENST00000588667 CBLN1P23435 193 aa15.25■□□□□ 0.03
ATG4D-208ENST00000588667 GCHFRP30047 84 aa15.25■□□□□ 0.03
ATG4D-208ENST00000588667 TM4SF20Q53R12 229 aa15.25■□□□□ 0.03
ATG4D-208ENST00000588667 VAX2Q9UIW0 290 aa15.25■□□□□ 0.03
ATG4D-208ENST00000588667 ZNF256Q9Y2P7 627 aaPredicted RBP15.25■□□□□ 0.03
ATG4D-208ENST00000588667 OR7C2O60412 319 aa15.25■□□□□ 0.03
ATG4D-208ENST00000588667 EDN2P20800 178 aa15.25■□□□□ 0.03
ATG4D-208ENST00000588667 ICAM4Q14773 271 aa15.25■□□□□ 0.03
ATG4D-208ENST00000588667 STXBP6Q8NFX7 210 aa15.25■□□□□ 0.03
ATG4D-208ENST00000588667 DYNLRB2Q8TF09 96 aa15.25■□□□□ 0.03
ATG4D-208ENST00000588667 C20orf24Q9BUV8 137 aa15.25■□□□□ 0.03
ATG4D-208ENST00000588667 TMEM167BQ9NRX6 74 aa15.25■□□□□ 0.03
ATG4D-208ENST00000588667 MRPL27Q9P0M9 148 aaKnown RBP15.25■□□□□ 0.03
ATG4D-208ENST00000588667 OR2K2Q8NGT1 345 aa15.24■□□□□ 0.03
ATG4D-208ENST00000588667 RXFP4Q8TDU9 374 aa15.24■□□□□ 0.03
ATG4D-208ENST00000588667 LINC00052Q96N35 136 aa15.24■□□□□ 0.03
ATG4D-208ENST00000588667 SLC25A2Q9BXI2 301 aa15.24■□□□□ 0.03
ATG4D-208ENST00000588667 PUS1Q9Y606 427 aaKnown RBP eCLIP15.24■□□□□ 0.03
ATG4D-208ENST00000588667 PRKDCP78527 4128 aaKnown RBP15.23■□□□□ 0.03
ATG4D-208ENST00000588667 K7EMT4 169 aa15.23■□□□□ 0.03
ATG4D-208ENST00000588667 SFTA3P0C7M3 94 aa15.23■□□□□ 0.03
ATG4D-208ENST00000588667 S100A7P31151 101 aa15.23■□□□□ 0.03
ATG4D-208ENST00000588667 MORN5Q5VZ52 161 aa15.23■□□□□ 0.03
ATG4D-208ENST00000588667 FAM167A-AS1Q96KT0 104 aa15.23■□□□□ 0.03
ATG4D-208ENST00000588667 SLC35B3Q9H1N7 401 aa15.23■□□□□ 0.03
ATG4D-208ENST00000588667 IGHV3OR16-8A0A075B7F1 116 aa15.22■□□□□ 0.03
ATG4D-208ENST00000588667 TRAV5A0A0B4J249 113 aa15.22■□□□□ 0.03
ATG4D-208ENST00000588667 C9JQL5 133 aa15.22■□□□□ 0.03
ATG4D-208ENST00000588667 LCN12Q6JVE5 192 aa15.22■□□□□ 0.03
ATG4D-208ENST00000588667 TOMM20LQ6UXN7 152 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms