RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 NHSL1Q5SYE7 1610 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 PXDNLA1KZ92 1463 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 A0A0D9SG52 128 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 OR51F1A6NGY5 319 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 PIAS1O75925 651 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 NBEAP1P0C6P0 100 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 NFYBP25208 207 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 PHF13Q86YI8 300 aaPredicted RBP3.82□□□□□ -1.8
VMP1-208ENST00000588617 WFDC11Q8NEX6 87 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 OR10J5Q8NHC4 309 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 DCANP1Q8TF63 244 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 BAIAP2Q9UQB8 552 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 HEATR5AQ86XA9 2040 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 MRC1P22897 1456 aa3.81□□□□□ -1.8
VMP1-208ENST00000588617 A0A1W2PRE2 83 aa3.81□□□□□ -1.8
VMP1-208ENST00000588617 MEIS3P1A6NDR6 274 aa3.81□□□□□ -1.8
VMP1-208ENST00000588617 ARRDC5A6NEK1 342 aa3.81□□□□□ -1.8
VMP1-208ENST00000588617 HTR1AP08908 422 aa3.81□□□□□ -1.8
VMP1-208ENST00000588617 OGNP20774 298 aaKnown RBP3.81□□□□□ -1.8
VMP1-208ENST00000588617 AQP4P55087 323 aa3.81□□□□□ -1.8
VMP1-208ENST00000588617 BRD3OSQ6XYD6 125 aa3.81□□□□□ -1.8
VMP1-208ENST00000588617 AAED1Q7RTV5 226 aa3.81□□□□□ -1.8
VMP1-208ENST00000588617 OR13D1Q8NGV5 346 aa3.81□□□□□ -1.8
VMP1-208ENST00000588617 EPDR1Q9UM22 224 aa3.81□□□□□ -1.8
VMP1-208ENST00000588617 LTN1O94822 1766 aa3.81□□□□□ -1.8
VMP1-208ENST00000588617 XIRP1Q702N8 1843 aaKnown RBP3.8□□□□□ -1.8
VMP1-208ENST00000588617 E7EQ34 232 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 PGLYRP1O75594 196 aaPredicted RBP3.8□□□□□ -1.8
VMP1-208ENST00000588617 CLPSP04118 112 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 METTL15P1P0C7V9 234 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 CRYGAP11844 174 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 SLC38A11Q08AI6 406 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 HES1Q14469 280 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 ALX1Q15699 326 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 SAMD13Q5VXD3 122 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 LCN15Q6UWW0 184 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 Q6ZTI0 123 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 NUP35Q8NFH5 326 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 OR4E2Q8NGC2 313 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 MBD3L1Q8WWY6 194 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 RMND5BQ96G75 393 aaPredicted RBP3.8□□□□□ -1.8
VMP1-208ENST00000588617 BATF3Q9NR55 127 aa3.8□□□□□ -1.8
VMP1-208ENST00000588617 PARP4Q9UKK3 1724 aaKnown RBP3.8□□□□□ -1.8
VMP1-208ENST00000588617 RGS12O14924 1447 aa3.79□□□□□ -1.8
VMP1-208ENST00000588617 RIC1Q4ADV7 1423 aa3.79□□□□□ -1.8
VMP1-208ENST00000588617 A0A0G2JQZ4 141 aa3.79□□□□□ -1.8
VMP1-208ENST00000588617 GGCTO75223 188 aaKnown RBP3.79□□□□□ -1.8
VMP1-208ENST00000588617 LGALS3P17931 250 aaKnown RBP3.79□□□□□ -1.8
VMP1-208ENST00000588617 RNASE4P34096 147 aaKnown RBP3.79□□□□□ -1.8
VMP1-208ENST00000588617 UBE2BP63146 152 aa3.79□□□□□ -1.8
VMP1-208ENST00000588617 ZNF181Q2M3W8 571 aa3.79□□□□□ -1.8
VMP1-208ENST00000588617 TMEM128Q5BJH2 165 aa3.79□□□□□ -1.8
VMP1-208ENST00000588617 CROCCP2Q86T23 111 aa3.79□□□□□ -1.8
VMP1-208ENST00000588617 YPEL2Q96QA6 119 aa3.79□□□□□ -1.8
VMP1-208ENST00000588617 EFCAB11Q9BUY7 163 aa3.79□□□□□ -1.8
VMP1-208ENST00000588617 CCDC32Q9BV29 185 aa3.79□□□□□ -1.8
VMP1-208ENST00000588617 DISP2A7MBM2 1401 aa3.78□□□□□ -1.8
VMP1-208ENST00000588617 KDM6AO15550 1401 aaPredicted RBP3.78□□□□□ -1.8
VMP1-208ENST00000588617 PKD1L3Q7Z443 1732 aa3.78□□□□□ -1.8
VMP1-208ENST00000588617 TRGV4A0A0C4DH28 118 aa3.78□□□□□ -1.8
VMP1-208ENST00000588617 LOC105371267A0A1B0GV96 52 aa3.78□□□□□ -1.8
VMP1-208ENST00000588617 TMEM256-PLSCR3K7ERE1 68 aa3.78□□□□□ -1.8
VMP1-208ENST00000588617 M0R378 163 aa3.78□□□□□ -1.8
VMP1-208ENST00000588617 IFNA14P01570 189 aa3.78□□□□□ -1.8
VMP1-208ENST00000588617 SHBGP04278 402 aa3.78□□□□□ -1.8
VMP1-208ENST00000588617 KRTAP10-8P60410 259 aa3.78□□□□□ -1.8
VMP1-208ENST00000588617 CANT1Q8WVQ1 401 aa3.78□□□□□ -1.8
VMP1-208ENST00000588617 GPX7Q96SL4 187 aaPredicted RBP3.78□□□□□ -1.8
VMP1-208ENST00000588617 OR52A1Q9UKL2 312 aa3.78□□□□□ -1.8
VMP1-208ENST00000588617 ABCA3Q99758 1704 aa3.78□□□□□ -1.8
VMP1-208ENST00000588617 ROBO1Q9Y6N7 1651 aa3.78□□□□□ -1.81
VMP1-208ENST00000588617 LRP6O75581 1613 aa3.77□□□□□ -1.81
VMP1-208ENST00000588617 CPAMD8Q8IZJ3 1885 aa3.77□□□□□ -1.81
VMP1-208ENST00000588617 LTBP2Q14767 1821 aa3.77□□□□□ -1.81
VMP1-208ENST00000588617 COL14A1Q05707 1796 aaKnown RBP3.77□□□□□ -1.81
VMP1-208ENST00000588617 KDM3BQ7LBC6 1761 aa3.77□□□□□ -1.81
VMP1-208ENST00000588617 OR2T1O43869 369 aa3.77□□□□□ -1.81
VMP1-208ENST00000588617 TRGC2P03986 189 aa3.77□□□□□ -1.81
VMP1-208ENST00000588617 COX6A1P12074 109 aa3.77□□□□□ -1.81
VMP1-208ENST00000588617 SKA2Q8WVK7 121 aaPredicted RBP3.77□□□□□ -1.81
VMP1-208ENST00000588617 TIMM21Q9BVV7 248 aa3.77□□□□□ -1.81
VMP1-208ENST00000588617 DLG5Q8TDM6 1919 aa3.77□□□□□ -1.81
VMP1-208ENST00000588617 PLCH1Q4KWH8 1693 aa3.77□□□□□ -1.81
VMP1-208ENST00000588617 PRORSD1PA6NEY8 169 aa3.76□□□□□ -1.81
VMP1-208ENST00000588617 INSL3P51460 131 aa3.76□□□□□ -1.81
VMP1-208ENST00000588617 SURF2Q15527 256 aaPredicted RBP3.76□□□□□ -1.81
VMP1-208ENST00000588617 TOMM20LQ6UXN7 152 aa3.76□□□□□ -1.81
VMP1-208ENST00000588617 DEFB128Q7Z7B8 93 aa3.76□□□□□ -1.81
VMP1-208ENST00000588617 IFT20Q8IY31 132 aa3.76□□□□□ -1.81
VMP1-208ENST00000588617 AQP3Q92482 292 aa3.76□□□□□ -1.81
VMP1-208ENST00000588617 LAMTOR3Q9UHA4 124 aa3.76□□□□□ -1.81
VMP1-208ENST00000588617 GINS2Q9Y248 185 aa3.76□□□□□ -1.81
VMP1-208ENST00000588617 HSPB11Q9Y547 144 aa3.76□□□□□ -1.81
VMP1-208ENST00000588617 TRGV10A0A0A0MS01 117 aa3.75□□□□□ -1.81
VMP1-208ENST00000588617 C7orf71A4D174 169 aa3.75□□□□□ -1.81
VMP1-208ENST00000588617 SDCBPO00560 298 aaPredicted RBP3.75□□□□□ -1.81
VMP1-208ENST00000588617 PMP2P02689 132 aa3.75□□□□□ -1.81
VMP1-208ENST00000588617 NNATQ16517 81 aa3.75□□□□□ -1.81
VMP1-208ENST00000588617 FKBP1CQ5VVH2 108 aa3.75□□□□□ -1.81
VMP1-208ENST00000588617 C22orf39Q6P5X5 142 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms