RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 LINC01551Q86U37 167 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 C2CD4CQ8TF44 421 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 ISOC2Q96AB3 205 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 PGPA6NDG6 321 aa15.34■□□□□ 0.05
TRIM47-204ENST00000587339 IGHV3-11P01762 117 aa15.34■□□□□ 0.05
TRIM47-204ENST00000587339 PSMB8P28062 276 aa15.34■□□□□ 0.05
TRIM47-204ENST00000587339 TMEM86BQ8N661 226 aa15.34■□□□□ 0.05
TRIM47-204ENST00000587339 TCEAL7Q9BRU2 100 aa15.34■□□□□ 0.05
TRIM47-204ENST00000587339 AKAP9Q99996 3911 aa15.34■□□□□ 0.05
TRIM47-204ENST00000587339 PGPEP1LA6NFU8 196 aa15.33■□□□□ 0.05
TRIM47-204ENST00000587339 IGLC2P0DOY2 106 aa15.33■□□□□ 0.05
TRIM47-204ENST00000587339 RNF212Q495C1 297 aa15.33■□□□□ 0.05
TRIM47-204ENST00000587339 Q9H3A6 140 aa15.33■□□□□ 0.05
TRIM47-204ENST00000587339 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.33■□□□□ 0.04
TRIM47-204ENST00000587339 C9JCJ5 164 aa15.33■□□□□ 0.04
TRIM47-204ENST00000587339 MRPS12O15235 138 aaKnown RBP15.33■□□□□ 0.04
TRIM47-204ENST00000587339 OR4X2Q8NGF9 303 aa15.33■□□□□ 0.04
TRIM47-204ENST00000587339 TMEM242Q9NWH2 141 aa15.33■□□□□ 0.04
TRIM47-204ENST00000587339 AURKAIP1Q9NWT8 199 aaPredicted RBP15.33■□□□□ 0.04
TRIM47-204ENST00000587339 TRBV19A0A075B6N1 114 aa15.32■□□□□ 0.04
TRIM47-204ENST00000587339 TMEM89A2RUT3 159 aa15.32■□□□□ 0.04
TRIM47-204ENST00000587339 TRBV12-3P01733 135 aa15.32■□□□□ 0.04
TRIM47-204ENST00000587339 MT-ND4LP03901 98 aa15.32■□□□□ 0.04
TRIM47-204ENST00000587339 SLC25A5P05141 298 aaKnown RBP15.32■□□□□ 0.04
TRIM47-204ENST00000587339 RPL7P18124 248 aaKnown RBP15.32■□□□□ 0.04
TRIM47-204ENST00000587339 SLC35B1P78383 322 aa15.32■□□□□ 0.04
TRIM47-204ENST00000587339 OR8I2Q8N0Y5 310 aa15.32■□□□□ 0.04
TRIM47-204ENST00000587339 C15orf54Q8N8G6 183 aa15.32■□□□□ 0.04
TRIM47-204ENST00000587339 HIST1H2BAQ96A08 127 aa15.32■□□□□ 0.04
TRIM47-204ENST00000587339 PEX7O00628 323 aa15.31■□□□□ 0.04
TRIM47-204ENST00000587339 EPDR1Q9UM22 224 aa15.31■□□□□ 0.04
TRIM47-204ENST00000587339 SONP18583 2426 aaKnown RBP15.31■□□□□ 0.04
TRIM47-204ENST00000587339 CLPSL1A2RUU4 121 aa15.31■□□□□ 0.04
TRIM47-204ENST00000587339 GNG4P50150 75 aa15.31■□□□□ 0.04
TRIM47-204ENST00000587339 RPL15P61313 204 aaKnown RBP15.31■□□□□ 0.04
TRIM47-204ENST00000587339 TEX38Q6PEX7 206 aa15.31■□□□□ 0.04
TRIM47-204ENST00000587339 C10orf99Q6UWK7 81 aa15.31■□□□□ 0.04
TRIM47-204ENST00000587339 C5orf17Q8NAS9 161 aa15.31■□□□□ 0.04
TRIM47-204ENST00000587339 OCC1Q8TAD7 63 aa15.31■□□□□ 0.04
TRIM47-204ENST00000587339 C17orf77Q96MU5 243 aa15.31■□□□□ 0.04
TRIM47-204ENST00000587339 CTDSP1Q9GZU7 261 aa15.31■□□□□ 0.04
TRIM47-204ENST00000587339 ACANP16112 2415 aa15.3■□□□□ 0.04
TRIM47-204ENST00000587339 CXorf65A6NEN9 183 aa15.3■□□□□ 0.04
TRIM47-204ENST00000587339 COLCA2A8K830 154 aa15.3■□□□□ 0.04
TRIM47-204ENST00000587339 CNN1P51911 297 aaKnown RBP15.3■□□□□ 0.04
TRIM47-204ENST00000587339 GNG5P63218 68 aa15.3■□□□□ 0.04
TRIM47-204ENST00000587339 CENPWQ5EE01 88 aa15.3■□□□□ 0.04
TRIM47-204ENST00000587339 METTL26Q96S19 204 aa15.3■□□□□ 0.04
TRIM47-204ENST00000587339 OTORQ9NRC9 128 aa15.3■□□□□ 0.04
TRIM47-204ENST00000587339 CLDN34H7C241 214 aa15.29■□□□□ 0.04
TRIM47-204ENST00000587339 Q8N2B8 174 aa15.29■□□□□ 0.04
TRIM47-204ENST00000587339 FAM24BQ8N5W8 94 aa15.29■□□□□ 0.04
TRIM47-204ENST00000587339 LINC00479Q96M42 142 aa15.29■□□□□ 0.04
TRIM47-204ENST00000587339 LY96Q9Y6Y9 160 aa15.29■□□□□ 0.04
TRIM47-204ENST00000587339 DNAJC9-AS1A6NH13 148 aa15.29■□□□□ 0.04
TRIM47-204ENST00000587339 BUB3O43684 328 aa15.29■□□□□ 0.04
TRIM47-204ENST00000587339 PDE6HQ13956 83 aa15.29■□□□□ 0.04
TRIM47-204ENST00000587339 FAM209BQ5JX69 171 aa15.29■□□□□ 0.04
TRIM47-204ENST00000587339 LYPD1Q8N2G4 141 aa15.29■□□□□ 0.04
TRIM47-204ENST00000587339 EXOC3-AS1Q8N2X6 119 aa15.29■□□□□ 0.04
TRIM47-204ENST00000587339 CDC42EP3Q9UKI2 254 aa15.29■□□□□ 0.04
TRIM47-204ENST00000587339 MYO9AB2RTY4 2548 aa15.28■□□□□ 0.04
TRIM47-204ENST00000587339 NDUFA4O00483 81 aa15.28■□□□□ 0.04
TRIM47-204ENST00000587339 SCGB2A2Q13296 93 aa15.28■□□□□ 0.04
TRIM47-204ENST00000587339 CMTM2Q8TAZ6 248 aa15.28■□□□□ 0.04
TRIM47-204ENST00000587339 ANAPC16Q96DE5 110 aa15.28■□□□□ 0.04
TRIM47-204ENST00000587339 ATG101Q9BSB4 218 aa15.28■□□□□ 0.04
TRIM47-204ENST00000587339 RPH3ALQ9UNE2 315 aa15.28■□□□□ 0.04
TRIM47-204ENST00000587339 URGCP-MRPS24S4R325 110 aa15.28■□□□□ 0.04
TRIM47-204ENST00000587339 TAS2R60P59551 318 aa15.27■□□□□ 0.04
TRIM47-204ENST00000587339 SIGLEC15Q6ZMC9 328 aa15.27■□□□□ 0.04
TRIM47-204ENST00000587339 H7BYZ3 331 aa15.27■□□□□ 0.03
TRIM47-204ENST00000587339 SLC17A3O00476 420 aa15.27■□□□□ 0.03
TRIM47-204ENST00000587339 ZNF207O43670 478 aaKnown RBP15.27■□□□□ 0.03
TRIM47-204ENST00000587339 GGCTO75223 188 aaKnown RBP15.27■□□□□ 0.03
TRIM47-204ENST00000587339 ELANEP08246 267 aa15.27■□□□□ 0.03
TRIM47-204ENST00000587339 FOXE3Q13461 319 aa15.27■□□□□ 0.03
TRIM47-204ENST00000587339 TMEM190Q8WZ59 177 aa15.27■□□□□ 0.03
TRIM47-204ENST00000587339 OR5B12Q96R08 314 aa15.27■□□□□ 0.03
TRIM47-204ENST00000587339 SMR3AQ99954 134 aa15.27■□□□□ 0.03
TRIM47-204ENST00000587339 PEF1Q9UBV8 284 aaKnown RBP15.27■□□□□ 0.03
TRIM47-204ENST00000587339 NOTCH2Q04721 2471 aa15.26■□□□□ 0.03
TRIM47-204ENST00000587339 FAM181BA6NEQ2 426 aa15.26■□□□□ 0.03
TRIM47-204ENST00000587339 K7EN84 100 aa15.26■□□□□ 0.03
TRIM47-204ENST00000587339 TCRAP04437 139 aa15.26■□□□□ 0.03
TRIM47-204ENST00000587339 RPLP1P05386 114 aaKnown RBP15.26■□□□□ 0.03
TRIM47-204ENST00000587339 CD99P14209 185 aa15.26■□□□□ 0.03
TRIM47-204ENST00000587339 SFRP2Q96HF1 295 aa15.26■□□□□ 0.03
TRIM47-204ENST00000587339 IGF2BP2-AS1Q96M15 143 aa15.26■□□□□ 0.03
TRIM47-204ENST00000587339 GPR82Q96P67 336 aa15.26■□□□□ 0.03
TRIM47-204ENST00000587339 SERTAD4Q9NUC0 356 aa15.26■□□□□ 0.03
TRIM47-204ENST00000587339 TMEM160Q9NX00 188 aa15.26■□□□□ 0.03
TRIM47-204ENST00000587339 TRAV34A0A0B4J273 112 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 IGHV3-66A0A0C4DH42 116 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 ISLRO14498 428 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 ATF4P18848 351 aaPredicted RBP15.25■□□□□ 0.03
TRIM47-204ENST00000587339 UBE2G1P62253 170 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 C1orf194Q5T5A4 169 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 UNQ9165/PRO28630Q6UXU0 137 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 YPEL4Q96NS1 127 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms