RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PUS1Q9Y606 427 aaKnown RBP eCLIP9.73□□□□□ -0.85
VMP1-202ENST00000585847 CMYA5Q8N3K9 4069 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 ZNF253O75346 499 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 LGALS1P09382 135 aaKnown RBP9.72□□□□□ -0.85
VMP1-202ENST00000585847 ADMP35318 185 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 CDX1P47902 265 aaPredicted RBP9.72□□□□□ -0.85
VMP1-202ENST00000585847 FAM106AQ4KMX7 169 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 CLEC19AQ6UXS0 136 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 MIR17HGQ75NE6 70 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 LYPD1Q8N2G4 141 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 ARL6IP6Q8N6S5 226 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 OR4F17Q8NGA8 305 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 GRAMD2BQ96HH9 432 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 UHRF2Q96PU4 802 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 OR4F4Q96R69 305 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 PAXXQ9BUH6 204 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 ELOVL1Q9BW60 279 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 OR51M1Q9H341 326 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 GNB4Q9HAV0 340 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 CLEC5AQ9NY25 188 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 RFNGQ9Y644 331 aa9.72□□□□□ -0.85
VMP1-202ENST00000585847 A0A1W2PS18 150 aa9.71□□□□□ -0.86
VMP1-202ENST00000585847 K7EMT4 169 aa9.71□□□□□ -0.86
VMP1-202ENST00000585847 GATA2P23769 480 aaPredicted RBP9.71□□□□□ -0.86
VMP1-202ENST00000585847 PATE2Q6UY27 113 aa9.71□□□□□ -0.86
VMP1-202ENST00000585847 SSX7Q7RTT5 188 aa9.71□□□□□ -0.86
VMP1-202ENST00000585847 NDUFA11Q86Y39 141 aa9.71□□□□□ -0.86
VMP1-202ENST00000585847 GPHB5Q86YW7 130 aa9.71□□□□□ -0.86
VMP1-202ENST00000585847 IQCF2Q8IXL9 164 aa9.71□□□□□ -0.86
VMP1-202ENST00000585847 FAM167A-AS1Q96KT0 104 aa9.71□□□□□ -0.86
VMP1-202ENST00000585847 CHRDL1Q9BU40 450 aa9.71□□□□□ -0.86
VMP1-202ENST00000585847 ZFAND3Q9H8U3 227 aa9.71□□□□□ -0.86
VMP1-202ENST00000585847 CARHSP1Q9Y2V2 147 aaKnown RBP9.71□□□□□ -0.86
VMP1-202ENST00000585847 UFC1Q9Y3C8 167 aa9.71□□□□□ -0.86
VMP1-202ENST00000585847 TSSC4Q9Y5U2 329 aaPredicted RBP9.71□□□□□ -0.86
VMP1-202ENST00000585847 HIST1H1EP10412 219 aaKnown RBP9.7□□□□□ -0.86
VMP1-202ENST00000585847 GP9P14770 177 aa9.7□□□□□ -0.86
VMP1-202ENST00000585847 FGF8P55075 233 aaPredicted RBP9.7□□□□□ -0.86
VMP1-202ENST00000585847 C10orf91Q5T1B1 145 aa9.7□□□□□ -0.86
VMP1-202ENST00000585847 TOMM20LQ6UXN7 152 aa9.7□□□□□ -0.86
VMP1-202ENST00000585847 SVBPQ8N300 66 aa9.7□□□□□ -0.86
VMP1-202ENST00000585847 C4orf3Q8WVX3 66 aa9.7□□□□□ -0.86
VMP1-202ENST00000585847 SCRT1Q9BWW7 348 aa9.7□□□□□ -0.86
VMP1-202ENST00000585847 SLC25A2Q9BXI2 301 aa9.7□□□□□ -0.86
VMP1-202ENST00000585847 DAZ1Q9NQZ3 744 aaKnown RBP9.7□□□□□ -0.86
VMP1-202ENST00000585847 DOK5Q9P104 306 aa9.7□□□□□ -0.86
VMP1-202ENST00000585847 A0A1W2PRX2 142 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 ZNF98A6NK75 572 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 C11orf94C9JXX5 98 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 LGALS9O00182 355 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 SFTA3P0C7M3 94 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 NPPCP23582 126 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 CRYBB3P26998 211 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 CCL20P78556 96 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 PNRC1Q12796 327 aaPredicted RBP9.69□□□□□ -0.86
VMP1-202ENST00000585847 ICAM4Q14773 271 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 USF2Q15853 346 aaPredicted RBP9.69□□□□□ -0.86
VMP1-202ENST00000585847 NSUN5P1Q3KNT7 163 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 SOHLH1Q5JUK2 328 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 REC114Q7Z4M0 266 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 PRELID1Q9Y255 219 aa9.69□□□□□ -0.86
VMP1-202ENST00000585847 TRRAPQ9Y4A5 3859 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 A0A1B0GV50 99 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 SERTM2A0A1B0GWG4 89 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 HELTA6NFD8 242 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 FBLL1A6NHQ2 334 aaKnown RBP9.68□□□□□ -0.86
VMP1-202ENST00000585847 FAM74A7A6NL05 159 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 A8MWP6 167 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 IGHV3-11P01762 117 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 S100A9P06702 114 aaKnown RBP9.68□□□□□ -0.86
VMP1-202ENST00000585847 GALR1P47211 349 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 HAGHQ16775 308 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 RPEL1Q2QD12 228 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 C8orf86Q6ZUL3 223 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 HIST1H2BAQ96A08 127 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 C11orf52Q96A22 123 aa9.68□□□□□ -0.86
VMP1-202ENST00000585847 A0A087X0K7 114 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 F8W036 122 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 PAGE4O60829 102 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 TRBV12-3P01733 135 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 NBEAP1P0C6P0 100 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 PSG9Q00887 426 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 DEFB136Q30KP8 78 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 KHDC1LQ5JSQ8 128 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 SPATA31B1PQ5VZV4 182 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 KLHL30-AS1Q8NEE0 82 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 RXFP4Q8TDU9 374 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 FXYD5Q96DB9 178 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 ZNF414Q96IQ9 312 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 OR5B12Q96R08 314 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 NIPSNAP3BQ9BS92 247 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 S4R3C0 116 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 U3KQE9 123 aa9.67□□□□□ -0.86
VMP1-202ENST00000585847 BUB3O43684 328 aa9.66□□□□□ -0.86
VMP1-202ENST00000585847 SNAPINO95295 136 aa9.66□□□□□ -0.86
VMP1-202ENST00000585847 IGHV3-23P01764 117 aa9.66□□□□□ -0.86
VMP1-202ENST00000585847 SRP19P09132 144 aaKnown RBP9.66□□□□□ -0.86
VMP1-202ENST00000585847 IGLC2P0DOY2 106 aa9.66□□□□□ -0.86
VMP1-202ENST00000585847 CST9LP1Q5W188 147 aa9.66□□□□□ -0.86
VMP1-202ENST00000585847 C1QL4Q86Z23 238 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms