RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 MIR17HGQ75NE6 70 aa7.52□□□□□ -1.21
SMCHD1-212ENST00000585229 LINC00305Q7Z4B0 112 aa7.52□□□□□ -1.21
SMCHD1-212ENST00000585229 C11orf44Q8N8P7 122 aa7.52□□□□□ -1.21
SMCHD1-212ENST00000585229 SUN5Q8TC36 379 aa7.52□□□□□ -1.21
SMCHD1-212ENST00000585229 ZNF503Q96F45 646 aa7.52□□□□□ -1.21
SMCHD1-212ENST00000585229 UHRF2Q96PU4 802 aa7.52□□□□□ -1.21
SMCHD1-212ENST00000585229 PBDC1Q9BVG4 233 aa7.52□□□□□ -1.21
SMCHD1-212ENST00000585229 SLC25A2Q9BXI2 301 aa7.52□□□□□ -1.21
SMCHD1-212ENST00000585229 MAP1LC3BQ9GZQ8 125 aa7.52□□□□□ -1.21
SMCHD1-212ENST00000585229 CDIP1Q9H305 208 aa7.52□□□□□ -1.21
SMCHD1-212ENST00000585229 RNF24Q9Y225 148 aa7.52□□□□□ -1.21
SMCHD1-212ENST00000585229 UFC1Q9Y3C8 167 aa7.52□□□□□ -1.21
SMCHD1-212ENST00000585229 TMEM213A2RRL7 107 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 ZNF98A6NK75 572 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 MRPS12O15235 138 aaKnown RBP7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 BUB3O43684 328 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 GP9P14770 177 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 MYCNOSP40205 109 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 RAB14P61106 215 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 TM4SF20Q53R12 229 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 C1orf194Q5T5A4 169 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 HIST2H2BDQ6DRA6 164 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 PQLC2Q6ZP29 291 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 Q8N1Y9 231 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 STXBP6Q8NFX7 210 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 TMEM158Q8WZ71 300 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 DPF1Q92782 380 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 METTL26Q96S19 204 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 ZNF747Q9BV97 191 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 SCRT1Q9BWW7 348 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 DAZ1Q9NQZ3 744 aaKnown RBP7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 MED9Q9NWA0 146 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 TMEM14CQ9P0S9 112 aa7.51□□□□□ -1.21
SMCHD1-212ENST00000585229 TRAV5A0A0B4J249 113 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 IGHV7-4-1A0A0J9YVY3 117 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 A0A1W2PRX2 142 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 LINC00862A6NCI5 91 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 CCL24O00175 119 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 CXorf1O96002 111 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 NPPCP23582 126 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 SLURP1P55000 103 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 SYNJ2BPP57105 145 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 C16orf54Q6UWD8 224 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 LCN15Q6UWW0 184 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 LURAP1LQ8IV03 231 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 SFT2D1Q8WV19 159 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 PCNPQ8WW12 178 aaKnown RBP7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 MARC2Q969Z3 335 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 C20orf24Q9BUV8 137 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 ARL2-SNX15V9GYD0 113 aa7.5□□□□□ -1.21
SMCHD1-212ENST00000585229 IGHV3OR16-8A0A075B7F1 116 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 A0A087X0K7 114 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 A0A1W2PS18 150 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 TEX46H3BTG2 121 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 EIF3GO75821 320 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 APOHP02749 345 aaPredicted RBP7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 ARL14EPLP0DKL9 152 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 GCHFRP30047 84 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 PSMB3P49720 205 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 CCL20P78556 96 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 IL34Q6ZMJ4 242 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 GLMPQ8WWB7 406 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 DLX4Q92988 240 aaPredicted RBP7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 FXYD5Q96DB9 178 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 GPR82Q96P67 336 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 DUX3Q96PT4 197 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 PAXXQ9BUH6 204 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 SIGLEC8Q9NYZ4 499 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 SMPXQ9UHP9 88 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 X6R8D5 127 aa7.49□□□□□ -1.21
SMCHD1-212ENST00000585229 ZNF320A2RRD8 509 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 C2orf70A6NJV1 201 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 CHEK1O14757 476 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 HMGB3O15347 200 aaKnown RBP7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 ZNF207O43670 478 aaKnown RBP7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 OR7C2O60412 319 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 NDUFS6O75380 124 aaKnown RBP7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 IGLC2P0DOY2 106 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 RPL7P18124 248 aaKnown RBP7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 PPT1P50897 306 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 FGF8P55075 233 aaPredicted RBP7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 NSUN5P1Q3KNT7 163 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 LEMD1Q68G75 181 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 ADAMTSL5Q6ZMM2 481 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 BPIFA4PQ86YQ2 179 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 OR9G4Q8NGQ1 327 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 NARS2Q96I59 477 aaKnown RBP7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 C17orf77Q96MU5 243 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 KRTAP9-2Q9BYQ4 174 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 OR51M1Q9H341 326 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 HRH4Q9H3N8 390 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 TMEM167BQ9NRX6 74 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 PEMTQ9UBM1 199 aa7.48□□□□□ -1.21
SMCHD1-212ENST00000585229 ZNF253O75346 499 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 CSN3P07498 182 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 PYYP10082 97 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 HIST1H1EP10412 219 aaKnown RBP7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 EDN2P20800 178 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 BMI1P35226 326 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 UBE2L3P68036 154 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms