RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 AVPP01185 164 aa11.86□□□□□ -0.51
CDK5RAP3-236ENST00000584991 IGHV1-69P01742 117 aa11.86□□□□□ -0.51
CDK5RAP3-236ENST00000584991 CRYGBP07316 175 aa11.86□□□□□ -0.51
CDK5RAP3-236ENST00000584991 CD24P25063 80 aa11.86□□□□□ -0.51
CDK5RAP3-236ENST00000584991 NUTF2P61970 127 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-236ENST00000584991 LINC00305Q7Z4B0 112 aa11.86□□□□□ -0.51
CDK5RAP3-236ENST00000584991 SRSF8Q9BRL6 282 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-236ENST00000584991 MIEN1Q9BRT3 115 aa11.86□□□□□ -0.51
CDK5RAP3-236ENST00000584991 TNFRSF19Q9NS68 423 aa11.86□□□□□ -0.51
CDK5RAP3-236ENST00000584991 SERTAD4Q9NUC0 356 aa11.86□□□□□ -0.51
CDK5RAP3-236ENST00000584991 PDZD2O15018 2839 aa11.86□□□□□ -0.51
CDK5RAP3-236ENST00000584991 TRAV5A0A0B4J249 113 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 IGLC7A0M8Q6 106 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 APCSP02743 223 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 IGHV4-38-2P0DP08 117 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 CNTFRP26992 372 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 CT83Q5H943 113 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 FAM162BQ5T6X4 162 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 TOMM20LQ6UXN7 152 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 BRD3OSQ6XYD6 125 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 OR4B1Q8NGF8 309 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 FOXC2Q99958 501 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 EPDR1Q9UM22 224 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 SOX21Q9Y651 276 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 SLC25A17O43808 307 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 ZNF253O75346 499 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 RPL27AP46776 148 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 FXYD3Q14802 87 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 MRGPRG-AS1Q2M3A8 158 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 MORN5Q5VZ52 161 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 TSKUQ8WUA8 353 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 VAMP8Q9BV40 100 aa11.85□□□□□ -0.51
CDK5RAP3-236ENST00000584991 UNC79Q9P2D8 2635 aa11.84□□□□□ -0.51
CDK5RAP3-236ENST00000584991 BMPR1BO00238 502 aa11.84□□□□□ -0.51
CDK5RAP3-236ENST00000584991 UBE2G1P62253 170 aa11.84□□□□□ -0.51
CDK5RAP3-236ENST00000584991 CYB5R2Q6BCY4 276 aa11.84□□□□□ -0.51
CDK5RAP3-236ENST00000584991 NUDT10Q8NFP7 164 aa11.84□□□□□ -0.51
CDK5RAP3-236ENST00000584991 NUDT11Q96G61 164 aa11.84□□□□□ -0.51
CDK5RAP3-236ENST00000584991 HECTD1Q9ULT8 2610 aa11.83□□□□□ -0.51
CDK5RAP3-236ENST00000584991 FAM231BA6NCW3 169 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 HYPMO75409 117 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 ZNF324O75467 553 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 OR2J3O76001 311 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 PYYP10082 97 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 KLF5Q13887 457 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 HES1Q14469 280 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 FBLN7Q53RD9 439 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 CIARTQ8N365 385 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 FMC1Q96HJ9 113 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 GPR82Q96P67 336 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 TPSG1Q9NRR2 321 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 ITPR2Q14571 2701 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 A0A1W2PS18 150 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 J3QLI3 93 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 MOSP00540 346 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 SNRPCP09234 159 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 NBEAP1P0C6P0 100 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 KLF17Q5JT82 389 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 DMRTA1Q5VZB9 504 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 C5orf17Q8NAS9 161 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 SNHG12Q9BXW3 62 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 NRN1Q9NPD7 142 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 ZNF492Q9P255 531 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 RNF24Q9Y225 148 aa11.83□□□□□ -0.52
CDK5RAP3-236ENST00000584991 NAV3Q8IVL0 2385 aa11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 SMAD7O15105 426 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 TOMM40O96008 361 aa11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 FRMD6-AS1P0C7T7 363 aa11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 SRIP30626 198 aa11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 AMTP48728 403 aa11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 SSBP2P81877 361 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 NUP35Q8NFH5 326 aa11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 ATG101Q9BSB4 218 aa11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 MLST8Q9BVC4 326 aa11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 GFRA4Q9GZZ7 299 aa11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 TMEM14CQ9P0S9 112 aa11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 SIGLEC9Q9Y336 463 aa11.82□□□□□ -0.52
CDK5RAP3-236ENST00000584991 PLXNB1O43157 2135 aa11.81□□□□□ -0.52
CDK5RAP3-236ENST00000584991 MMDQ15546 238 aa11.81□□□□□ -0.52
CDK5RAP3-236ENST00000584991 C10orf55Q5SWW7 151 aa11.81□□□□□ -0.52
CDK5RAP3-236ENST00000584991 FAM120AOSQ5T036 256 aa11.81□□□□□ -0.52
CDK5RAP3-236ENST00000584991 MRPL54Q6P161 138 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-236ENST00000584991 PPP1R27Q86WC6 154 aa11.81□□□□□ -0.52
CDK5RAP3-236ENST00000584991 VN1R17PQ8TDU5 208 aa11.81□□□□□ -0.52
CDK5RAP3-236ENST00000584991 NEU1Q99519 415 aa11.81□□□□□ -0.52
CDK5RAP3-236ENST00000584991 PRSS22Q9GZN4 317 aa11.81□□□□□ -0.52
CDK5RAP3-236ENST00000584991 FBXL15Q9H469 300 aa11.81□□□□□ -0.52
CDK5RAP3-236ENST00000584991 F11RQ9Y624 299 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-236ENST00000584991 ABCA1O95477 2261 aa11.81□□□□□ -0.52
CDK5RAP3-236ENST00000584991 TRBV6-1A0A0K0K1D8 114 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 A8MWL6 223 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 DIRC3C9JPN6 131 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 SLC25A5P05141 298 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 CELSR1Q9NYQ6 3014 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 CCDC168Q8NDH2 2452 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 ZNF469Q96JG9 3925 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 F2Z2F3 143 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 TCAPO15273 167 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 MFAP2P55001 183 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 TCL1AP56279 114 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms