RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 RPL11P62913 178 aaKnown RBP13.86□□□□□ -0.19
RFFL-211ENST00000584541 LEMD1Q68G75 181 aa13.86□□□□□ -0.19
RFFL-211ENST00000584541 DPPA3Q6W0C5 159 aa13.86□□□□□ -0.19
RFFL-211ENST00000584541 MIR17HGQ75NE6 70 aa13.86□□□□□ -0.19
RFFL-211ENST00000584541 TCF24Q7RTU0 167 aa13.86□□□□□ -0.19
RFFL-211ENST00000584541 GLMPQ8WWB7 406 aa13.86□□□□□ -0.19
RFFL-211ENST00000584541 IGLL1P15814 213 aa13.85□□□□□ -0.19
RFFL-211ENST00000584541 GALR1P47211 349 aa13.85□□□□□ -0.19
RFFL-211ENST00000584541 DEFB114Q30KQ6 69 aa13.85□□□□□ -0.19
RFFL-211ENST00000584541 KHDC3LQ587J8 217 aa13.85□□□□□ -0.19
RFFL-211ENST00000584541 SPATA31B1PQ5VZV4 182 aa13.85□□□□□ -0.19
RFFL-211ENST00000584541 SIGLEC15Q6ZMC9 328 aa13.85□□□□□ -0.19
RFFL-211ENST00000584541 RBPMS2Q6ZRY4 209 aaKnown RBP13.85□□□□□ -0.19
RFFL-211ENST00000584541 BPIFA4PQ86YQ2 179 aa13.85□□□□□ -0.19
RFFL-211ENST00000584541 RPP25LQ8N5L8 163 aaKnown RBP13.85□□□□□ -0.19
RFFL-211ENST00000584541 OR2K2Q8NGT1 345 aa13.85□□□□□ -0.19
RFFL-211ENST00000584541 TRAV5A0A0B4J249 113 aa13.84□□□□□ -0.19
RFFL-211ENST00000584541 IGLV1-51P01701 117 aa13.84□□□□□ -0.19
RFFL-211ENST00000584541 SULT1A2P50226 295 aa13.84□□□□□ -0.19
RFFL-211ENST00000584541 MORN5Q5VZ52 161 aa13.84□□□□□ -0.19
RFFL-211ENST00000584541 ALKAL2Q6UX46 152 aa13.84□□□□□ -0.19
RFFL-211ENST00000584541 STXBP6Q8NFX7 210 aa13.84□□□□□ -0.19
RFFL-211ENST00000584541 RAB24Q969Q5 203 aa13.84□□□□□ -0.19
RFFL-211ENST00000584541 TRAV25A0A0B4J276 109 aa13.83□□□□□ -0.2
RFFL-211ENST00000584541 CTXND1A0A1B0GTU2 59 aa13.83□□□□□ -0.2
RFFL-211ENST00000584541 ATF4P18848 351 aaPredicted RBP13.83□□□□□ -0.2
RFFL-211ENST00000584541 PAFAH1B2P68402 229 aa13.83□□□□□ -0.2
RFFL-211ENST00000584541 CD300EQ496F6 205 aaPredicted RBP13.83□□□□□ -0.2
RFFL-211ENST00000584541 LCN12Q6JVE5 192 aa13.83□□□□□ -0.2
RFFL-211ENST00000584541 FAM213BQ8TBF2 198 aa13.83□□□□□ -0.2
RFFL-211ENST00000584541 SLC25A2Q9BXI2 301 aa13.83□□□□□ -0.2
RFFL-211ENST00000584541 SELENOKQ9Y6D0 94 aa13.83□□□□□ -0.2
RFFL-211ENST00000584541 ZNF785A8K8V0 405 aa13.82□□□□□ -0.2
RFFL-211ENST00000584541 OR7C2O60412 319 aa13.82□□□□□ -0.2
RFFL-211ENST00000584541 FAM90A2PQ658T7 463 aa13.82□□□□□ -0.2
RFFL-211ENST00000584541 TEX261Q6UWH6 196 aa13.82□□□□□ -0.2
RFFL-211ENST00000584541 PQLC2Q6ZP29 291 aa13.82□□□□□ -0.2
RFFL-211ENST00000584541 RNF141Q8WVD5 230 aa13.82□□□□□ -0.2
RFFL-211ENST00000584541 PLA2G2EQ9NZK7 142 aa13.82□□□□□ -0.2
RFFL-211ENST00000584541 TMEM14CQ9P0S9 112 aa13.82□□□□□ -0.2
RFFL-211ENST00000584541 IGKV3-7A0A075B6H7 116 aa13.81□□□□□ -0.2
RFFL-211ENST00000584541 IFNA7P01567 189 aa13.81□□□□□ -0.2
RFFL-211ENST00000584541 FAM74A1Q5RGS3 127 aa13.81□□□□□ -0.2
RFFL-211ENST00000584541 TMEM61Q8N0U2 210 aa13.81□□□□□ -0.2
RFFL-211ENST00000584541 FAM167A-AS1Q96KT0 104 aa13.81□□□□□ -0.2
RFFL-211ENST00000584541 PAXXQ9BUH6 204 aa13.81□□□□□ -0.2
RFFL-211ENST00000584541 OR51M1Q9H341 326 aa13.81□□□□□ -0.2
RFFL-211ENST00000584541 ANK2Q01484 3957 aa13.8□□□□□ -0.2
RFFL-211ENST00000584541 DNASE2O00115 360 aaPredicted RBP13.8□□□□□ -0.2
RFFL-211ENST00000584541 TSPAN4O14817 238 aa13.8□□□□□ -0.2
RFFL-211ENST00000584541 HMGB3O15347 200 aaKnown RBP13.8□□□□□ -0.2
RFFL-211ENST00000584541 CXorf1O96002 111 aa13.8□□□□□ -0.2
RFFL-211ENST00000584541 STAG3L2P0CL84 134 aa13.8□□□□□ -0.2
RFFL-211ENST00000584541 STAG3L3P0CL85 134 aa13.8□□□□□ -0.2
RFFL-211ENST00000584541 MEOX2P50222 304 aa13.8□□□□□ -0.2
RFFL-211ENST00000584541 MAP1LC3B2A6NCE7 125 aa13.79□□□□□ -0.2
RFFL-211ENST00000584541 WIPF1O43516 503 aa13.79□□□□□ -0.2
RFFL-211ENST00000584541 H2AFB1P0C5Y9 115 aa13.79□□□□□ -0.2
RFFL-211ENST00000584541 GP9P14770 177 aa13.79□□□□□ -0.2
RFFL-211ENST00000584541 FHITP49789 147 aa13.79□□□□□ -0.2
RFFL-211ENST00000584541 ZNF726P1Q15940 193 aa13.79□□□□□ -0.2
RFFL-211ENST00000584541 GUCA2BQ16661 112 aa13.79□□□□□ -0.2
RFFL-211ENST00000584541 SAMD13Q5VXD3 122 aa13.79□□□□□ -0.2
RFFL-211ENST00000584541 LCN15Q6UWW0 184 aa13.79□□□□□ -0.2
RFFL-211ENST00000584541 LRRC20Q8TCA0 184 aa13.79□□□□□ -0.2
RFFL-211ENST00000584541 SPAG8Q99932 426 aaPredicted RBP13.79□□□□□ -0.2
RFFL-211ENST00000584541 MAP1LC3BQ9GZQ8 125 aa13.79□□□□□ -0.2
RFFL-211ENST00000584541 NRN1Q9NPD7 142 aa13.79□□□□□ -0.2
RFFL-211ENST00000584541 ZMAT5Q9UDW3 170 aaKnown RBP13.79□□□□□ -0.2
RFFL-211ENST00000584541 A0A087X0K7 114 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 ZNF705EA8MWA4 302 aaPredicted RBP13.78□□□□□ -0.2
RFFL-211ENST00000584541 TEX46H3BTG2 121 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 MRPS12O15235 138 aaKnown RBP13.78□□□□□ -0.2
RFFL-211ENST00000584541 EIF3GO75821 320 aaKnown RBP eCLIP13.78□□□□□ -0.2
RFFL-211ENST00000584541 ARL14EPLP0DKL9 152 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 PYYP10082 97 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 HIST1H1EP10412 219 aaKnown RBP13.78□□□□□ -0.2
RFFL-211ENST00000584541 UBE2L3P68036 154 aaKnown RBP13.78□□□□□ -0.2
RFFL-211ENST00000584541 GUK1Q16774 197 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 OXLD1Q5BKU9 147 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 SSX7Q7RTT5 188 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 GBGT1Q8N5D6 347 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 ZNF680Q8NEM1 530 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 SFT2D1Q8WV19 159 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 MS4A6AQ9H2W1 248 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 HRH4Q9H3N8 390 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 UBQLN2Q9UHD9 624 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 SMAD5-AS1Q9Y6J3 95 aa13.78□□□□□ -0.2
RFFL-211ENST00000584541 TRAV2A0A0B4J234 112 aa13.77□□□□□ -0.21
RFFL-211ENST00000584541 IZUMO1RA6ND01 250 aa13.77□□□□□ -0.21
RFFL-211ENST00000584541 OR4C46A6NHA9 309 aa13.77□□□□□ -0.21
RFFL-211ENST00000584541 OR10J4P0C629 311 aa13.77□□□□□ -0.21
RFFL-211ENST00000584541 IGLC2P0DOY2 106 aa13.77□□□□□ -0.21
RFFL-211ENST00000584541 TFPI2P48307 235 aa13.77□□□□□ -0.21
RFFL-211ENST00000584541 BLOC1S1P78537 153 aa13.77□□□□□ -0.21
RFFL-211ENST00000584541 WFDC3Q8IUB2 231 aa13.77□□□□□ -0.21
RFFL-211ENST00000584541 IQCF2Q8IXL9 164 aa13.77□□□□□ -0.21
RFFL-211ENST00000584541 MBD3L1Q8WWY6 194 aa13.77□□□□□ -0.21
RFFL-211ENST00000584541 HBE1P02100 147 aa13.76□□□□□ -0.21
RFFL-211ENST00000584541 NBEAP1P0C6P0 100 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms