RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	C18orf32	Q8TCD1	76 aa		10.55	□□□□□ -0.72
CSNK1D-222	ENST00000584377	CLUHP3	Q96NS8	147 aa		10.55	□□□□□ -0.72
CSNK1D-222	ENST00000584377	ABCA1	O95477	2261 aa		10.55	□□□□□ -0.72
CSNK1D-222	ENST00000584377	IGF2R	P11717	2491 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	CCL21	O00585	134 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	HSBP1	O75506	76 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	CA1	P00915	261 aa	Predicted RBP	10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	RBP4	P02753	201 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	MRPL54	Q6P161	138 aa	Known RBP	10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	BLNK	Q8WV28	456 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	FBXL15	Q9H469	300 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377		M0R2Z0	102 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	AMY1A	P04745	511 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	IGLC1	P0CG04	106 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	PAX2	Q02962	417 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	SPATA12	Q7Z6I5	190 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	ONECUT1	Q9UBC0	465 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	F11R	Q9Y624	299 aa	Known RBP	10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	TACC2	O95359	2948 aa		10.54	□□□□□ -0.72
CSNK1D-222	ENST00000584377	C2orf70	A6NJV1	201 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	TEX22	C9J3V5	150 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377		G3V4G9	280 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	APCS	P02743	223 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	GNG5	P63218	68 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	ASPHD1	Q5U4P2	390 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	C12orf54	Q6X4T0	127 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	FER1L6-AS1	Q8NA97	138 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	ZC2HC1A	Q96GY0	325 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	CD5L	O43866	347 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	MYCNOS	P40205	109 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	FAM168A	Q92567	244 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	LRBA	P50851	2863 aa		10.53	□□□□□ -0.72
CSNK1D-222	ENST00000584377	PLGLA	Q15195	96 aa		10.52	□□□□□ -0.72
CSNK1D-222	ENST00000584377	C8orf46	Q8TAG6	207 aa		10.52	□□□□□ -0.72
CSNK1D-222	ENST00000584377	SRSF12	Q8WXF0	261 aa	Known RBP	10.52	□□□□□ -0.72
CSNK1D-222	ENST00000584377	ST20	Q9HBF5	79 aa		10.52	□□□□□ -0.72
CSNK1D-222	ENST00000584377	SLC25A5	P05141	298 aa	Known RBP	10.52	□□□□□ -0.73
CSNK1D-222	ENST00000584377	SLA	Q13239	276 aa		10.52	□□□□□ -0.73
CSNK1D-222	ENST00000584377	FAM231D	Q6ZW35	169 aa		10.52	□□□□□ -0.73
CSNK1D-222	ENST00000584377	KIR3DL3	Q8N743	410 aa		10.52	□□□□□ -0.73
CSNK1D-222	ENST00000584377	PEF1	Q9UBV8	284 aa	Known RBP	10.52	□□□□□ -0.73
CSNK1D-222	ENST00000584377	EPDR1	Q9UM22	224 aa		10.52	□□□□□ -0.73
CSNK1D-222	ENST00000584377	MSRB2	Q9Y3D2	182 aa		10.52	□□□□□ -0.73
CSNK1D-222	ENST00000584377	IZUMO1R	A6ND01	250 aa		10.51	□□□□□ -0.73
CSNK1D-222	ENST00000584377	PGP	A6NDG6	321 aa		10.51	□□□□□ -0.73
CSNK1D-222	ENST00000584377	LY6H	O94772	140 aa		10.51	□□□□□ -0.73
CSNK1D-222	ENST00000584377	LIPF	P07098	398 aa		10.51	□□□□□ -0.73
CSNK1D-222	ENST00000584377	TCF24	Q7RTU0	167 aa		10.51	□□□□□ -0.73
CSNK1D-222	ENST00000584377	ZZEF1	O43149	2961 aa		10.51	□□□□□ -0.73
CSNK1D-222	ENST00000584377	OR4C46	A6NHA9	309 aa		10.51	□□□□□ -0.73
CSNK1D-222	ENST00000584377	LY6L	H3BQJ8	138 aa		10.51	□□□□□ -0.73
CSNK1D-222	ENST00000584377	SLC25A34	Q6PIV7	304 aa		10.51	□□□□□ -0.73
CSNK1D-222	ENST00000584377	CDSN	Q15517	529 aa		10.51	□□□□□ -0.73
CSNK1D-222	ENST00000584377	S100A7A	Q86SG5	101 aa		10.51	□□□□□ -0.73
CSNK1D-222	ENST00000584377	RNF5	Q99942	180 aa		10.51	□□□□□ -0.73
CSNK1D-222	ENST00000584377	hDV102S1	A0JD36	115 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	GAGE10	A6NGK3	116 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	TIMM23	O14925	209 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	GOSR1	O95249	250 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	GP9	P14770	177 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	PLP1	P60201	277 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	MBD6	Q96DN6	1003 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	SGK494	Q96LW2	274 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	TMEM70	Q9BUB7	260 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	CNIH1	O95406	144 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	NHLH1	Q02575	133 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	LY6G5B	Q8NDX9	201 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	GRAMD2B	Q96HH9	432 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	RAB1B	Q9H0U4	201 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	CLEC5A	Q9NY25	188 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	RAX	Q9Y2V3	346 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	DCHS2	Q6V1P9	2916 aa		10.5	□□□□□ -0.73
CSNK1D-222	ENST00000584377	ATRX	P46100	2492 aa		10.49	□□□□□ -0.73
CSNK1D-222	ENST00000584377	LYZ	P61626	148 aa		10.49	□□□□□ -0.73
CSNK1D-222	ENST00000584377	RNASEK	Q6P5S7	137 aa	Known RBP	10.49	□□□□□ -0.73
CSNK1D-222	ENST00000584377	HIGD1A	Q9Y241	93 aa		10.49	□□□□□ -0.73
CSNK1D-222	ENST00000584377		H3BTX0	84 aa		10.49	□□□□□ -0.73
CSNK1D-222	ENST00000584377	HIST1H1E	P10412	219 aa	Known RBP	10.49	□□□□□ -0.73
CSNK1D-222	ENST00000584377	HTR1D	P28221	377 aa		10.49	□□□□□ -0.73
CSNK1D-222	ENST00000584377	TIMD4	Q96H15	378 aa		10.49	□□□□□ -0.73
CSNK1D-222	ENST00000584377	KLF12	Q9Y4X4	402 aa		10.49	□□□□□ -0.73
CSNK1D-222	ENST00000584377		I3L2K1	104 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	UCN	P55089	124 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	ADORA2A-AS1	P86434	159 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	KLRB1	Q12918	225 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377		Q5PR19	223 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	SAMD13	Q5VXD3	122 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	C5orf17	Q8NAS9	161 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	OR1N2	Q8NGR9	330 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	GPR82	Q96P67	336 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	RASL11B	Q9BPW5	248 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	CHRDL1	Q9BU40	450 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	C7orf69	Q9H7B7	122 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	HILPDA	Q9Y5L2	63 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	UFSP1	Q6NVU6	142 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	NUP35	Q8NFH5	326 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377		Q9H3A6	140 aa		10.48	□□□□□ -0.73
CSNK1D-222	ENST00000584377	DPM3	Q9P2X0	92 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms