RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 TMEM191AQ9H0A3 160 aa7.97□□□□□ -1.13
TRAPPC8-211ENST00000582539 YLPM1P49750 1951 aaKnown RBP7.97□□□□□ -1.13
TRAPPC8-211ENST00000582539 IGKV1D-37A0A075B6S9 117 aa7.97□□□□□ -1.13
TRAPPC8-211ENST00000582539 GGTLC3B5MD39 225 aa7.97□□□□□ -1.13
TRAPPC8-211ENST00000582539 SCGB1D1O95968 90 aa7.97□□□□□ -1.13
TRAPPC8-211ENST00000582539 LBHQ53QV2 105 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC8-211ENST00000582539 CYYR1Q96J86 154 aa7.97□□□□□ -1.13
TRAPPC8-211ENST00000582539 GPR61Q9BZJ8 451 aa7.97□□□□□ -1.13
TRAPPC8-211ENST00000582539 MED14OSP0DP75 135 aa7.96□□□□□ -1.13
TRAPPC8-211ENST00000582539 TM4SF20Q53R12 229 aa7.96□□□□□ -1.13
TRAPPC8-211ENST00000582539 NUDT10Q8NFP7 164 aa7.96□□□□□ -1.13
TRAPPC8-211ENST00000582539 NUDT11Q96G61 164 aa7.96□□□□□ -1.13
TRAPPC8-211ENST00000582539 NIT2Q9NQR4 276 aa7.96□□□□□ -1.13
TRAPPC8-211ENST00000582539 IGHV3-21A0A0B4J1V1 117 aa7.96□□□□□ -1.13
TRAPPC8-211ENST00000582539 ZNF414Q96IQ9 312 aa7.96□□□□□ -1.13
TRAPPC8-211ENST00000582539 GCSHP23434 173 aa7.96□□□□□ -1.14
TRAPPC8-211ENST00000582539 PKIAP61925 76 aa7.96□□□□□ -1.14
TRAPPC8-211ENST00000582539 LY6EQ16553 131 aa7.96□□□□□ -1.14
TRAPPC8-211ENST00000582539 GPHB5Q86YW7 130 aa7.96□□□□□ -1.14
TRAPPC8-211ENST00000582539 C1orf229Q6ZS94 237 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC8-211ENST00000582539 OR10D4PQ8NGN7 298 aa7.96□□□□□ -1.14
TRAPPC8-211ENST00000582539 SGK494Q96LW2 274 aa7.96□□□□□ -1.14
TRAPPC8-211ENST00000582539 ODF3Q96PU9 254 aa7.96□□□□□ -1.14
TRAPPC8-211ENST00000582539 IGHV4-30-2A0A087WSY4 118 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 OR4C46A6NHA9 309 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 RNF152Q8N8N0 203 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 IGF2BP2-AS1Q96M15 143 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 PMCHL2Q9BQD1 86 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 BDP1A6H8Y1 2624 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 ARID1AO14497 2285 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 LY6HO94772 140 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 PET117Q6UWS5 81 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 FER1L6-AS1Q8NA97 138 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 FANCD2OSQ96PS1 177 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 V9GYV3 84 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 HAX1O00165 279 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 PRSS3P2Q8NHM4 247 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 FAM103A1Q9BTL3 118 aaKnown RBP7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 DMRT1Q9Y5R6 373 aa7.95□□□□□ -1.14
TRAPPC8-211ENST00000582539 HIST1H2BKO60814 126 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 HIST1H2BJP06899 126 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 APELAP0DMC3 54 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 FABP4P15090 132 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 HIST1H2BOP23527 126 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 HIST1H2BBP33778 126 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 HIST1H2BDP58876 126 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 HIST1H2BCP62807 126 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 HIST2H2BEQ16778 126 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 PATE2Q6UY27 113 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 REC114Q7Z4M0 266 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 HIST1H2BHQ93079 126 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 RAX2Q96IS3 184 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 HIST1H2BNQ99877 126 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 HIST1H2BMQ99879 126 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 MAP1LC3AQ9H492 121 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 NRN1Q9NPD7 142 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 TRAV5A0A0B4J249 113 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 TRAV25A0A0B4J276 109 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 C19orf84I3L1E1 186 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 K7EMI3 77 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 ASIPP42127 132 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 FOXC2Q99958 501 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 MAP1LC3CQ9BXW4 147 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 RAI1Q7Z5J4 1906 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 CADP27708 2225 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 ZFHX2Q9C0A1 2572 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 TRGV11A0A075B6L2 103 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 IGLC2P0DOY2 106 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 AMTP48728 403 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 DEFA6Q01524 100 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 MRPL54Q6P161 138 aaKnown RBP7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 H7C1H1 209 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 LGALS9O00182 355 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 PHOX2AO14813 284 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 LGALS1P09382 135 aaKnown RBP7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 TMEM160Q9NX00 188 aa7.94□□□□□ -1.14
TRAPPC8-211ENST00000582539 RP1L1Q8IWN7 2480 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 CTSGP08311 255 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 LCN12Q6JVE5 192 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 UBE2E2Q96LR5 201 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 NXT2Q9NPJ8 142 aaKnown RBP7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 NAGKQ9UJ70 344 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 IGHV7-4-1A0A0J9YVY3 117 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 CGB1A6NKQ9 187 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 HIGD1CA8MV81 97 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 MYCNOSP40205 109 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 VAMP8Q9BV40 100 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 ANKHD1Q8IWZ3 2542 aaKnown RBP7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 IGKV1OR2-108A0A075B7D4 117 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 OR10AG1Q8NH19 301 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 USF3Q68DE3 2245 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 MALRD1Q5VYJ5 2156 aa7.93□□□□□ -1.14
TRAPPC8-211ENST00000582539 IGHG4P01861 327 aa7.92□□□□□ -1.14
TRAPPC8-211ENST00000582539 NUTF2P61970 127 aaKnown RBP7.92□□□□□ -1.14
TRAPPC8-211ENST00000582539 OR2K2Q8NGT1 345 aa7.92□□□□□ -1.14
TRAPPC8-211ENST00000582539 PLCE1Q9P212 2302 aa7.92□□□□□ -1.14
TRAPPC8-211ENST00000582539 DSCAMO60469 2012 aa7.92□□□□□ -1.14
TRAPPC8-211ENST00000582539 ORMDL3Q8N138 153 aa7.92□□□□□ -1.14
TRAPPC8-211ENST00000582539 NEU1Q99519 415 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms