RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 SAT2Q96F10 170 aaPredicted RBP6.64□□□□□ -1.35
PDLIM1P3-201ENST00000582370 RAX2Q96IS3 184 aa6.64□□□□□ -1.35
PDLIM1P3-201ENST00000582370 WFDC1Q9HC57 220 aa6.64□□□□□ -1.35
PDLIM1P3-201ENST00000582370 CLEC5AQ9NY25 188 aa6.64□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TECRQ9NZ01 308 aaKnown RBP6.64□□□□□ -1.35
PDLIM1P3-201ENST00000582370 IGHV3-21A0A0B4J1V1 117 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 ZNF320A2RRD8 509 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 IGHV3-48P01763 117 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 HBE1P02100 147 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 OR5G3P0C626 314 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 RPL7P18124 248 aaKnown RBP6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 CRYBB3P26998 211 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TAGLN2P37802 199 aaKnown RBP6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 NKX2-5P52952 324 aaPredicted RBP6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 BLOC1S1P78537 153 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 ZNF90Q03938 601 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 GUK1Q16774 197 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 KHDC3LQ587J8 217 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TOMM20LQ6UXN7 152 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 PQLC2Q6ZP29 291 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 OR10G4Q8NGN3 311 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 OR10G9Q8NGN4 311 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 OR10G7Q8NGN6 311 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 OR9G4Q8NGQ1 327 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 OR1B1Q8NGR6 318 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 OR2K2Q8NGT1 345 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 IL17DQ8TAD2 202 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 DUX3Q96PT4 197 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 CHRDL1Q9BU40 450 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 PBDC1Q9BVG4 233 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 ZFAND3Q9H8U3 227 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 MRPL36Q9P0J6 103 aaKnown RBP6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 UBQLN2Q9UHD9 624 aa6.63□□□□□ -1.35
PDLIM1P3-201ENST00000582370 IGHV4OR15-8A0A075B7B6 117 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 A0A087WW49 117 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 CTXND1A0A1B0GTU2 59 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 PPP5D1E7EU14 171 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 OVOL1O14753 267 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 IGHV3-23P01764 117 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 ORM2P19652 201 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 SULT1A2P50226 295 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 LYZP61626 148 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 PAFAH1B2P68402 229 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 FAM78BQ5VT40 261 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 MIC13Q5XKP0 118 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 LINC00305Q7Z4B0 112 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 BPIFA4PQ86YQ2 179 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 SUN5Q8TC36 379 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 LINC00476Q8WZB0 136 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 RSG1Q9BU20 258 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 C20orf24Q9BUV8 137 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 NKX6-2Q9C056 277 aaPredicted RBP6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TMEM14CQ9P0S9 112 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 FUT9Q9Y231 359 aa6.62□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TRAV2A0A0B4J234 112 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TRAV1-1A0A0B4J248 108 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TRAV25A0A0B4J276 109 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 IGHV7-4-1A0A0J9YVY3 117 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 BUB3O43684 328 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 CXorf1O96002 111 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 C8orf88P0DMB2 117 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 GALR1P47211 349 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 CDC34P49427 236 aaPredicted RBP6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 PSMB3P49720 205 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 CMC4P56277 68 aaPredicted RBP6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 PDE6HQ13956 83 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 ZNF680Q8NEM1 530 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TMED6Q8WW62 240 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 OR5B12Q96R08 314 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 SPATA25Q9BR10 227 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TCEAL7Q9BRU2 100 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 SHANK2-AS3Q9BTD1 123 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 SLC25A39Q9BZJ4 359 aaPredicted RBP6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 SEPSECSQ9HD40 501 aaKnown RBP6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TMEM167BQ9NRX6 74 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 S4R3C0 116 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 ARL2-SNX15V9GYD0 113 aa6.61□□□□□ -1.35
PDLIM1P3-201ENST00000582370 ZNF98A6NK75 572 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 HMGB3O15347 200 aaKnown RBP6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 ZNF253O75346 499 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TRBV12-3P01733 135 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 H2AFB1P0C5Y9 115 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 CBLN1P23435 193 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 SYNJ2BPP57105 145 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 DEFA5Q01523 94 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 PMS2P11Q13670 270 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 USF2Q15853 346 aaPredicted RBP6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TMEM182Q6ZP80 229 aaPredicted RBP6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 OR8I2Q8N0Y5 310 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 LYPD1Q8N2G4 141 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 ARL6IP6Q8N6S5 226 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 MBD3L1Q8WWY6 194 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TMEM37Q8WXS4 190 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 TXNDC17Q9BRA2 123 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 VSIRQ9H7M9 311 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 RPRMQ9NS64 109 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 SMPXQ9UHP9 88 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 U3KQE9 123 aa6.6□□□□□ -1.35
PDLIM1P3-201ENST00000582370 C2orf70A6NJV1 201 aa6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 ZNF705EA8MWA4 302 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms