RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 GIG44P09565 113 aaPredicted RBP5.47□□□□□ -1.53
CCDC47-205ENST00000582331 P0C879 139 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 LPAR6P43657 344 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 NHLH2Q02577 135 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 MORN3Q6PF18 240 aaPredicted RBP5.47□□□□□ -1.53
CCDC47-205ENST00000582331 TCF24Q7RTU0 167 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 UBAC2Q8NBM4 344 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 OR1S2Q8NGQ3 325 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 LRRC20Q8TCA0 184 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 LINC00052Q96N35 136 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 AIFM2Q9BRQ8 373 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 SCRT1Q9BWW7 348 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 SMIM3Q9BZL3 60 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 MAGT1Q9H0U3 335 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 BET1LQ9NYM9 111 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 C21orf62Q9NYP8 219 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 CELA1Q9UNI1 258 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 IGHV3-21A0A0B4J1V1 117 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 YIF1AO95070 293 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 CD5P06127 495 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 SPP1P10451 314 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 SULT1A2P50226 295 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 RELQ04864 619 aaPredicted RBP5.46□□□□□ -1.54
CCDC47-205ENST00000582331 IZUMO4Q1ZYL8 232 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 RNF212Q495C1 297 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 Q56UQ5 140 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 THOC7Q6I9Y2 204 aaKnown RBP5.46□□□□□ -1.54
CCDC47-205ENST00000582331 TMEM252Q8N6L7 170 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 OR10W1Q8NGF6 305 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 SAT2Q96F10 170 aaPredicted RBP5.46□□□□□ -1.54
CCDC47-205ENST00000582331 SMIM8Q96KF7 97 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 GINS3Q9BRX5 216 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 COMMD5Q9GZQ3 224 aa5.46□□□□□ -1.54
CCDC47-205ENST00000582331 FAM212BQ9NTI7 297 aaPredicted RBP5.46□□□□□ -1.54
CCDC47-205ENST00000582331 LYRM2Q9NU23 88 aaPredicted RBP5.46□□□□□ -1.54
CCDC47-205ENST00000582331 IGHV3OR16-13A0A075B7E8 117 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 BORCS7-ASMTA0A0B4J1R7 106 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 IGHV3-74A0A0B4J1X5 117 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 RAB19A4D1S5 217 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 KRBOX1C9JBD0 128 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 UPK2O00526 184 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 NUPL2O15504 423 aaKnown RBP5.45□□□□□ -1.54
CCDC47-205ENST00000582331 CTSGP08311 255 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 SEC11BP0C7V7 166 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 OR13C7P0DN81 318 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 PVALBP20472 110 aaPredicted RBP5.45□□□□□ -1.54
CCDC47-205ENST00000582331 RPL11P62913 178 aaKnown RBP5.45□□□□□ -1.54
CCDC47-205ENST00000582331 EIF5AL1Q6IS14 154 aaKnown RBP5.45□□□□□ -1.54
CCDC47-205ENST00000582331 ZNF66Q6ZN08 573 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 TRPT1Q86TN4 253 aaKnown RBP5.45□□□□□ -1.54
CCDC47-205ENST00000582331 CCDC28AQ8IWP9 274 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 FAM210BQ96KR6 192 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 QTRT1Q9BXR0 403 aaKnown RBP5.45□□□□□ -1.54
CCDC47-205ENST00000582331 SLC25A31Q9H0C2 315 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 MS4A6AQ9H2W1 248 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 TMEM14BQ9NUH8 114 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 CACNG5Q9UF02 275 aa5.45□□□□□ -1.54
CCDC47-205ENST00000582331 TRAV2A0A0B4J234 112 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 TRAV3A0A0B4J244 114 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 FAM90A26D6RGX4 464 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 NPIPB6E9PJ23 425 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 SYNGR2O43760 224 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 SSSCA1O60232 199 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 CAV2P51636 162 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 VAMP2P63027 116 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 BLOC1S1P78537 153 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 WT1-ASQ06250 92 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 CATR1Q13166 79 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 PXDC1Q5TGL8 231 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 UQCC3Q6UW78 93 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 SPAG16Q8N0X2 631 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 FAM24BQ8N5W8 94 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 CSNK1G2-AS1Q8NCQ2 148 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 BPIFCQ8NFQ6 507 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 LYPD6BQ8NI32 183 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 ZNF414Q96IQ9 312 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 RAB40CQ96S21 281 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 CLEC5AQ9NY25 188 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 CACFD1Q9UGQ2 172 aa5.44□□□□□ -1.54
CCDC47-205ENST00000582331 F11RQ9Y624 299 aaKnown RBP5.44□□□□□ -1.54
CCDC47-205ENST00000582331 DNAH5Q8TE73 4624 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 TEX50A0A1B0GTY4 177 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 KNCNA6PVL3 124 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 EPM2AB3EWF7 344 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 K7EIM0 57 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 WRBO00258 174 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 RBFOX2O43251 390 aaKnown RBP eCLIP5.43□□□□□ -1.54
CCDC47-205ENST00000582331 MED6O75586 246 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 SCO1O75880 301 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 CST7O76096 145 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 NXPH3O95157 252 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 SPART-AS1P0CW21 52 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 INAFM2P0DMQ5 153 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 NQO2P16083 231 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 AKR1C2P52895 323 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 MFAP4P55083 255 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 TAS2R30P59541 319 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 SRSF3P84103 164 aaKnown RBP5.43□□□□□ -1.54
CCDC47-205ENST00000582331 BAXQ07812 192 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 ARL16Q0P5N6 197 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 232.6 ms