RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 MRPL32Q9BYC8 188 aaKnown RBP7.2□□□□□ -1.26
RFFL-210ENST00000582308 TMEM231Q9H6L2 316 aa7.2□□□□□ -1.26
RFFL-210ENST00000582308 SLC25A22Q9H936 323 aa7.2□□□□□ -1.26
RFFL-210ENST00000582308 PFDN2Q9UHV9 154 aa7.2□□□□□ -1.26
RFFL-210ENST00000582308 FUT9Q9Y231 359 aa7.2□□□□□ -1.26
RFFL-210ENST00000582308 A0A1W2PPV4 95 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 MRPS12O15235 138 aaKnown RBP7.19□□□□□ -1.26
RFFL-210ENST00000582308 HMGB3O15347 200 aaKnown RBP7.19□□□□□ -1.26
RFFL-210ENST00000582308 SAP30O75446 220 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 S100A7P31151 101 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 BMI1P35226 326 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 CDC34P49427 236 aaPredicted RBP7.19□□□□□ -1.26
RFFL-210ENST00000582308 TEX261Q6UWH6 196 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 TCF24Q7RTU0 167 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 S100A7AQ86SG5 101 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 OR8I2Q8N0Y5 310 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 ZNF680Q8NEM1 530 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 DYNLRB2Q8TF09 96 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 ZNF503Q96F45 646 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 GRAMD2BQ96HH9 432 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 C17orf77Q96MU5 243 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 ACTR3CQ9C0K3 210 aaPredicted RBP7.19□□□□□ -1.26
RFFL-210ENST00000582308 SMAD5-AS1Q9Y6J3 95 aa7.19□□□□□ -1.26
RFFL-210ENST00000582308 MGAM2Q2M2H8 2515 aa7.18□□□□□ -1.26
RFFL-210ENST00000582308 CTXND1A0A1B0GTU2 59 aa7.18□□□□□ -1.26
RFFL-210ENST00000582308 IZUMO1RA6ND01 250 aa7.18□□□□□ -1.26
RFFL-210ENST00000582308 IGLV1-51P01701 117 aa7.18□□□□□ -1.26
RFFL-210ENST00000582308 RAB5CP51148 216 aa7.18□□□□□ -1.26
RFFL-210ENST00000582308 IFITM2Q01629 132 aa7.18□□□□□ -1.26
RFFL-210ENST00000582308 CD300EQ496F6 205 aaPredicted RBP7.18□□□□□ -1.26
RFFL-210ENST00000582308 PRR31Q5SQ13 230 aa7.18□□□□□ -1.26
RFFL-210ENST00000582308 C9orf66Q5T8R8 295 aa7.18□□□□□ -1.26
RFFL-210ENST00000582308 DPPA3Q6W0C5 159 aa7.18□□□□□ -1.26
RFFL-210ENST00000582308 FAM213BQ8TBF2 198 aa7.18□□□□□ -1.26
RFFL-210ENST00000582308 MCRIP2Q9BUT9 160 aaKnown RBP7.18□□□□□ -1.26
RFFL-210ENST00000582308 AGRNO00468 2067 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 IGKV3-7A0A075B6H7 116 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 H3BQ15 152 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 SNRPCP09234 159 aaKnown RBP7.17□□□□□ -1.26
RFFL-210ENST00000582308 STAG3L2P0CL84 134 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 STAG3L3P0CL85 134 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 ARL14EPLP0DKL9 152 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 PYYP10082 97 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 GP9P14770 177 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 RPL7P18124 248 aaKnown RBP7.17□□□□□ -1.26
RFFL-210ENST00000582308 INSL3P51460 131 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 TAS2R45P59539 299 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 OXLD1Q5BKU9 147 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 LCN15Q6UWW0 184 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 SIGLEC15Q6ZMC9 328 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 BPIFA4PQ86YQ2 179 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 TMEM61Q8N0U2 210 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 MBD3L1Q8WWY6 194 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 GPR82Q96P67 336 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 PAXXQ9BUH6 204 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 TMEM14CQ9P0S9 112 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 RNF24Q9Y225 148 aa7.17□□□□□ -1.26
RFFL-210ENST00000582308 NOTCH1P46531 2555 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 TRAV25A0A0B4J276 109 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 MAP1LC3B2A6NCE7 125 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 HELTA6NFD8 242 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 ZNF785A8K8V0 405 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 ZNF705EA8MWA4 302 aaPredicted RBP7.16□□□□□ -1.26
RFFL-210ENST00000582308 WIPF1O43516 503 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 OR7C2O60412 319 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 IFNA7P01567 189 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 IGLC2P0DOY2 106 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 GALR1P47211 349 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 FGF8P55075 233 aaPredicted RBP7.16□□□□□ -1.26
RFFL-210ENST00000582308 RPL11P62913 178 aaKnown RBP7.16□□□□□ -1.26
RFFL-210ENST00000582308 KHDC3LQ587J8 217 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 GBGT1Q8N5D6 347 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 STXBP6Q8NFX7 210 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 RNF141Q8WVD5 230 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 FXYD5Q96DB9 178 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 MAP1LC3BQ9GZQ8 125 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 OR51M1Q9H341 326 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 HRH4Q9H3N8 390 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 ZNF586Q9NXT0 402 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 NBEAL1Q6ZS30 2694 aa7.16□□□□□ -1.26
RFFL-210ENST00000582308 A0A087X0K7 114 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 H3BTX0 84 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 TSPAN4O14817 238 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 CXorf1O96002 111 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 CD5P06127 495 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 H2AFB1P0C5Y9 115 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 OR10J4P0C629 311 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 HIST1H1EP10412 219 aaKnown RBP7.15□□□□□ -1.26
RFFL-210ENST00000582308 ATF4P18848 351 aaPredicted RBP7.15□□□□□ -1.26
RFFL-210ENST00000582308 GCHFRP30047 84 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 PQLC2Q6ZP29 291 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 RBPMS2Q6ZRY4 209 aaKnown RBP7.15□□□□□ -1.26
RFFL-210ENST00000582308 OR2K2Q8NGT1 345 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 SUN5Q8TC36 379 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 DCANP1Q8TF63 244 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 SFT2D1Q8WV19 159 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 SAT2Q96F10 170 aaPredicted RBP7.15□□□□□ -1.26
RFFL-210ENST00000582308 MS4A6AQ9H2W1 248 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 TMPRSS5Q9H3S3 457 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms