RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 CHODLQ9H9P2 273 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 ZNF331Q9NQX6 463 aaPredicted RBP8.35□□□□□ -1.07
TOP3A-209ENST00000580095 EPDR1Q9UM22 224 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 ARL2-SNX15V9GYD0 113 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 A0A1W2PS18 150 aa8.34□□□□□ -1.07
TOP3A-209ENST00000580095 HYPMO75409 117 aa8.34□□□□□ -1.07
TOP3A-209ENST00000580095 PRRX1P54821 245 aa8.34□□□□□ -1.07
TOP3A-209ENST00000580095 COX11Q9Y6N1 276 aa8.34□□□□□ -1.07
TOP3A-209ENST00000580095 SPG11Q96JI7 2443 aa8.34□□□□□ -1.07
TOP3A-209ENST00000580095 GPX1P07203 203 aa8.34□□□□□ -1.07
TOP3A-209ENST00000580095 UNQ5815/PRO19632Q6UWF5 114 aa8.34□□□□□ -1.07
TOP3A-209ENST00000580095 PERPQ96FX8 193 aa8.34□□□□□ -1.07
TOP3A-209ENST00000580095 VKORC1Q9BQB6 163 aa8.34□□□□□ -1.07
TOP3A-209ENST00000580095 ITPR1Q14643 2758 aa8.34□□□□□ -1.08
TOP3A-209ENST00000580095 TRAV9-1A0A075B6T8 112 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 INS-IGF2F8WCM5 200 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 FOXA3P55318 350 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-209ENST00000580095 RBPJQ06330 500 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 LCN12Q6JVE5 192 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 TEX45Q8NA69 505 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 STXBP6Q8NFX7 210 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 WNT10AQ9GZT5 417 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 NRN1Q9NPD7 142 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 RAXQ9Y2V3 346 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 HIVEP3Q5T1R4 2406 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 IZUMO1RA6ND01 250 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 CRYGCP07315 174 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 CRYGBP07316 175 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 Q0VG73 95 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 SCGB2A2Q13296 93 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 HES1Q14469 280 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 Q9H3A6 140 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 SMPXQ9UHP9 88 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 IGHV3OR16-8A0A075B7F1 116 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 IGHV3-23P01764 117 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 GP9P14770 177 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 MYCNOSP40205 109 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 PAFAH1B2P68402 229 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 PMCHL1Q16048 86 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 FAM71F2Q6NXP2 309 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 CIARTQ8N365 385 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-209ENST00000580095 C8orf31Q8N9H6 132 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 TMEM116Q8NCL8 245 aa8.33□□□□□ -1.08
TOP3A-209ENST00000580095 ZNF48Q96MX3 618 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-209ENST00000580095 F11RQ9Y624 299 aaKnown RBP8.33□□□□□ -1.08
TOP3A-209ENST00000580095 SH2D7A6NKC9 451 aaPredicted RBP8.32□□□□□ -1.08
TOP3A-209ENST00000580095 PGLYRP4Q96LB8 373 aa8.32□□□□□ -1.08
TOP3A-209ENST00000580095 DIRC3C9JPN6 131 aa8.32□□□□□ -1.08
TOP3A-209ENST00000580095 IGLC1P0CG04 106 aa8.32□□□□□ -1.08
TOP3A-209ENST00000580095 GOLT1AQ6ZVE7 132 aa8.32□□□□□ -1.08
TOP3A-209ENST00000580095 MBD6Q96DN6 1003 aa8.32□□□□□ -1.08
TOP3A-209ENST00000580095 TRGV9Q99603 122 aa8.32□□□□□ -1.08
TOP3A-209ENST00000580095 TXN2Q99757 166 aa8.32□□□□□ -1.08
TOP3A-209ENST00000580095 ZNF586Q9NXT0 402 aa8.32□□□□□ -1.08
TOP3A-209ENST00000580095 TRBV9A0A0B4J1U6 114 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 IGHV3-35A0A0C4DH35 117 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 NDUFS7O75251 213 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 IGKV1-17P01599 117 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 HLA-DQA1P01909 254 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 SHISA2Q6UWI4 295 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 PRNTQ86SH4 94 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 ZNF738Q8NE65 137 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 C18orf32Q8TCD1 76 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 TSKUQ8WUA8 353 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 KCNS1Q96KK3 526 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 VAMP8Q9BV40 100 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 MEGF9Q9H1U4 602 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 C7orf69Q9H7B7 122 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 HIGD1AQ9Y241 93 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 TRAV30A0A087WSZ9 112 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 MT-ND6P03923 174 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 TMEM183BQ1AE95 376 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 RNASEKQ6P5S7 137 aaKnown RBP8.31□□□□□ -1.08
TOP3A-209ENST00000580095 TEX43Q6ZNM6 134 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 GTSF1Q8WW33 167 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 RASL11BQ9BPW5 248 aa8.31□□□□□ -1.08
TOP3A-209ENST00000580095 SLC25A39Q9BZJ4 359 aaPredicted RBP8.31□□□□□ -1.08
TOP3A-209ENST00000580095 J3KRW8 73 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 ZNF324O75467 553 aaPredicted RBP8.3□□□□□ -1.08
TOP3A-209ENST00000580095 TCRAP04437 139 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 ESDP10768 282 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 NIT1Q86X76 327 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 Q8N976 141 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 OR8B3Q8NGG8 313 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 C8orf46Q8TAG6 207 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 GRAMD2BQ96HH9 432 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 GPR82Q96P67 336 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 OR8B2Q96RD0 313 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 I3L2K1 104 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 C3orf79P0CE67 100 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 TIMM8BQ9Y5J9 83 aaPredicted RBP8.3□□□□□ -1.08
TOP3A-209ENST00000580095 M0R3E3 92 aa8.3□□□□□ -1.08
TOP3A-209ENST00000580095 NCBP2LA6PVI3 153 aaKnown RBP8.29□□□□□ -1.08
TOP3A-209ENST00000580095 K7EIM0 57 aa8.29□□□□□ -1.08
TOP3A-209ENST00000580095 P01737 135 aa8.29□□□□□ -1.08
TOP3A-209ENST00000580095 HIST1H1EP10412 219 aaKnown RBP8.29□□□□□ -1.08
TOP3A-209ENST00000580095 ZNF138P52744 262 aa8.29□□□□□ -1.08
TOP3A-209ENST00000580095 DYNAPQ8N1N2 210 aa8.29□□□□□ -1.08
TOP3A-209ENST00000580095 TPPP3Q9BW30 176 aa8.29□□□□□ -1.08
TOP3A-209ENST00000580095 LY6LH3BQJ8 138 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms