RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 IGHV4-59P01825 116 aa8.22□□□□□ -1.09
MSI2-209ENST00000579483 ORMDL2Q53FV1 153 aa8.22□□□□□ -1.09
MSI2-209ENST00000579483 IZUMO1RA6ND01 250 aa8.21□□□□□ -1.09
MSI2-209ENST00000579483 SNRPEP62304 92 aaKnown RBP8.21□□□□□ -1.09
MSI2-209ENST00000579483 TMEM170BQ5T4T1 132 aa8.21□□□□□ -1.09
MSI2-209ENST00000579483 OTOGLQ3ZCN5 2332 aa8.21□□□□□ -1.09
MSI2-209ENST00000579483 TRAV3A0A0B4J244 114 aa8.21□□□□□ -1.09
MSI2-209ENST00000579483 STAG3L3P0CL85 134 aa8.21□□□□□ -1.09
MSI2-209ENST00000579483 ATP5G3P48201 142 aa8.21□□□□□ -1.09
MSI2-209ENST00000579483 NUDT10Q8NFP7 164 aa8.21□□□□□ -1.09
MSI2-209ENST00000579483 OR11H2Q8NH07 326 aa8.21□□□□□ -1.09
MSI2-209ENST00000579483 RMI2Q96E14 147 aa8.21□□□□□ -1.09
MSI2-209ENST00000579483 UBE2E2Q96LR5 201 aa8.21□□□□□ -1.09
MSI2-209ENST00000579483 SHANK2-AS3Q9BTD1 123 aa8.21□□□□□ -1.09
MSI2-209ENST00000579483 NXT2Q9NPJ8 142 aaKnown RBP8.21□□□□□ -1.09
MSI2-209ENST00000579483 CBY1Q9Y3M2 126 aa8.21□□□□□ -1.09
MSI2-209ENST00000579483 CDX1P47902 265 aaPredicted RBP8.21□□□□□ -1.1
MSI2-209ENST00000579483 WDR86Q86TI4 376 aa8.21□□□□□ -1.1
MSI2-209ENST00000579483 CCL24O00175 119 aa8.21□□□□□ -1.1
MSI2-209ENST00000579483 HOXA5P20719 270 aa8.21□□□□□ -1.1
MSI2-209ENST00000579483 SLAQ13239 276 aa8.21□□□□□ -1.1
MSI2-209ENST00000579483 CYSLTR1Q9Y271 337 aa8.21□□□□□ -1.1
MSI2-209ENST00000579483 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.2□□□□□ -1.1
MSI2-209ENST00000579483 NTF4P34130 210 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 SEC11AP67812 179 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 ST6GALNAC6Q969X2 333 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 TOMM7Q9P0U1 55 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 G3V318 75 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 LGALS1P09382 135 aaKnown RBP8.2□□□□□ -1.1
MSI2-209ENST00000579483 FHITP49789 147 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 NDUFA4L2Q9NRX3 87 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 DOCK10Q96BY6 2186 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 GNG5P63218 68 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 SRSF1Q07955 248 aaKnown RBP eCLIP8.2□□□□□ -1.1
MSI2-209ENST00000579483 TCF23Q7RTU1 214 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 MBD3L1Q8WWY6 194 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 TRAV12-3A0A0B4J271 114 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 CLPSL1A2RUU4 121 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 OR13C6PQ8NH95 151 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 TMEM14BQ9NUH8 114 aa8.2□□□□□ -1.1
MSI2-209ENST00000579483 LINC00587B1AMM8 73 aa8.19□□□□□ -1.1
MSI2-209ENST00000579483 CBLN2Q8IUK8 224 aa8.19□□□□□ -1.1
MSI2-209ENST00000579483 SDHCQ99643 169 aaPredicted RBP8.19□□□□□ -1.1
MSI2-209ENST00000579483 HIVEP2P31629 2446 aa8.19□□□□□ -1.1
MSI2-209ENST00000579483 C2orf16Q68DN1 1984 aa8.19□□□□□ -1.1
MSI2-209ENST00000579483 SCN8AQ9UQD0 1980 aa8.19□□□□□ -1.1
MSI2-209ENST00000579483 TGIF2-C20orf24A0A0A6YYL0 155 aa8.19□□□□□ -1.1
MSI2-209ENST00000579483 CENPVL3A0A0U1RRI6 287 aa8.19□□□□□ -1.1
MSI2-209ENST00000579483 TCRAP04437 139 aa8.19□□□□□ -1.1
MSI2-209ENST00000579483 IL17DQ8TAD2 202 aa8.19□□□□□ -1.1
MSI2-209ENST00000579483 ZNF414Q96IQ9 312 aa8.19□□□□□ -1.1
MSI2-209ENST00000579483 RNF126Q9BV68 326 aa8.19□□□□□ -1.1
MSI2-209ENST00000579483 SEPSECSQ9HD40 501 aaKnown RBP8.19□□□□□ -1.1
MSI2-209ENST00000579483 TMEM89A2RUT3 159 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 HIGD1CA8MV81 97 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 CA1P00915 261 aaPredicted RBP8.18□□□□□ -1.1
MSI2-209ENST00000579483 DEFB130BP0DP73 79 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 DEFB130AP0DP74 79 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 LINC01559Q495D7 138 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 PARD6GQ9BYG4 376 aaPredicted RBP8.18□□□□□ -1.1
MSI2-209ENST00000579483 DPH3P1Q9H4G8 78 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 C15orf65H3BRN8 121 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 H3BVH4 76 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 APOMO95445 188 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 MYCNOSP40205 109 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 HAPLN4Q86UW8 402 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 TTC9CQ8N5M4 171 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 SRP19P09132 144 aaKnown RBP8.18□□□□□ -1.1
MSI2-209ENST00000579483 SEM1Q6ZVN7 128 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 MYLKQ15746 1914 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 IGKV2-40A0A087WW87 121 aaPredicted RBP8.18□□□□□ -1.1
MSI2-209ENST00000579483 RNF222A6NCQ9 220 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 F5H768 121 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 IGKV2D-40P01614 121 aaPredicted RBP8.18□□□□□ -1.1
MSI2-209ENST00000579483 PMCHL2Q9BQD1 86 aa8.18□□□□□ -1.1
MSI2-209ENST00000579483 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
MSI2-209ENST00000579483 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
MSI2-209ENST00000579483 LHBP01229 141 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
MSI2-209ENST00000579483 RBMY1A1P0DJD3 496 aaKnown RBP8.17□□□□□ -1.1
MSI2-209ENST00000579483 RBMY1CP0DJD4 496 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 ATP5L2Q7Z4Y8 100 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 IGLV3-1P01715 115 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 MGST2Q99735 147 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 HSPB9Q9BQS6 159 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 CTSZQ9UBR2 303 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 C7orf71A4D174 169 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 OR5A1Q8NGJ0 315 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 WFDC12Q8WWY7 111 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 ATP6V0BQ99437 205 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 IGHV7-4-1A0A0J9YVY3 117 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 DNAL4O96015 105 aa8.17□□□□□ -1.1
MSI2-209ENST00000579483 APOHP02749 345 aaPredicted RBP8.17□□□□□ -1.1
MSI2-209ENST00000579483 C15orf62A8K5M9 175 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.16□□□□□ -1.1
MSI2-209ENST00000579483 INSL3P51460 131 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 POU2AF1Q16633 256 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 RSPO1Q2MKA7 263 aaPredicted RBP8.16□□□□□ -1.1
MSI2-209ENST00000579483 TSKUQ8WUA8 353 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 XCL2Q9UBD3 114 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms