RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CYB561D1Q8N8Q1 229 aa7.87□□□□□ -1.15
SS18-210ENST00000578700 WIPF2Q8TF74 440 aaPredicted RBP7.87□□□□□ -1.15
SS18-210ENST00000578700 DPF1Q92782 380 aa7.87□□□□□ -1.15
SS18-210ENST00000578700 ATP6V0BQ99437 205 aa7.87□□□□□ -1.15
SS18-210ENST00000578700 B9D2Q9BPU9 175 aa7.87□□□□□ -1.15
SS18-210ENST00000578700 SCRT1Q9BWW7 348 aa7.87□□□□□ -1.15
SS18-210ENST00000578700 G3V318 75 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 AMY1AP04745 511 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 ADCYAP1P18509 176 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 PLP1P60201 277 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 UBE2G2P60604 165 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 GUCA2BQ16661 112 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 KLK9Q2XQG4 91 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 CLRN3Q8NCR9 226 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 TMEM37Q8WXS4 190 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 TVP23CQ96ET8 276 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 USMG5Q96IX5 58 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 MS4A10Q96PG2 267 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 PAXXQ9BUH6 204 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 OR51M1Q9H341 326 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 ZNF580Q9UK33 172 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 KLK9Q9UKQ9 250 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 TSSC4Q9Y5U2 329 aaPredicted RBP7.86□□□□□ -1.15
SS18-210ENST00000578700 PUS1Q9Y606 427 aaKnown RBP eCLIP7.86□□□□□ -1.15
SS18-210ENST00000578700 DNAH1Q9P2D7 4330 aa7.86□□□□□ -1.15
SS18-210ENST00000578700 TRBV9A0A0B4J1U6 114 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 A0A0G2JLM5 398 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 ZNF727A8MUV8 499 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 BRI3O95415 125 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 IGKV1-17P01599 117 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 TRGV3P03979 118 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 IL4P05112 153 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 TPPP2P59282 170 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 SLC35B1P78383 322 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 RELQ04864 619 aaPredicted RBP7.85□□□□□ -1.15
SS18-210ENST00000578700 PNRC1Q12796 327 aaPredicted RBP7.85□□□□□ -1.15
SS18-210ENST00000578700 RHEBQ15382 184 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 ZNF674Q2M3X9 581 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 TCTEX1D4Q5JR98 221 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 TMEM190Q8WZ59 177 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 RNF125Q96EQ8 232 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 SMIM7Q9BQ49 75 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 GNB4Q9HAV0 340 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 PRELID1Q9Y255 219 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 S4R3C0 116 aa7.85□□□□□ -1.15
SS18-210ENST00000578700 HUWE1Q7Z6Z7 4374 aaKnown RBP7.85□□□□□ -1.15
SS18-210ENST00000578700 PSMB11A5LHX3 300 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 OR2T8A6NH00 312 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 LINC01548A6NM66 108 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 B4DEV8 164 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 H3BQ15 152 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 BMPR1BO00238 502 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 OR10J4P0C629 311 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 GPR183P32249 361 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 CD81P60033 236 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 FAM209BQ5JX69 171 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 C10orf99Q6UWK7 81 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 PATE2Q6UY27 113 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 ZNF600Q6ZNG1 722 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 OR4X2Q8NGF9 303 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 ZNF502Q8TBZ5 544 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 RPUSD4Q96CM3 377 aaKnown RBP7.84□□□□□ -1.15
SS18-210ENST00000578700 ASCL2Q99929 193 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 SLC25A2Q9BXI2 301 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 RPS10P5Q9NQ39 176 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 NAT8Q9UHE5 227 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 U3KQK5 164 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 TNCP24821 2201 aa7.84□□□□□ -1.15
SS18-210ENST00000578700 TRAV5A0A0B4J249 113 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 A0A1W2PRE2 83 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 FAM74A7A6NL05 159 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 SCO1O75880 301 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 OR2C1O95371 312 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 IGHV3-23P01764 117 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 CLEC3BP05452 202 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 RAB9AP51151 201 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 BTN1A1Q13410 526 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 TMEM241Q24JQ0 296 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 CLEC19AQ6UXS0 136 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 BPIFA4PQ86YQ2 179 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 TCEAL7Q9BRU2 100 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 SLC25A39Q9BZJ4 359 aaPredicted RBP7.83□□□□□ -1.16
SS18-210ENST00000578700 TMEM14CQ9P0S9 112 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 RABAC1Q9UI14 185 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 LINC00527Q9UJ94 153 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 BIRC6Q9NR09 4857 aa7.83□□□□□ -1.16
SS18-210ENST00000578700 TGOLN2O43493 480 aa7.82□□□□□ -1.16
SS18-210ENST00000578700 CTSGP08311 255 aa7.82□□□□□ -1.16
SS18-210ENST00000578700 NHLRC4P0CG21 123 aaPredicted RBP7.82□□□□□ -1.16
SS18-210ENST00000578700 ATP5G3P48201 142 aa7.82□□□□□ -1.16
SS18-210ENST00000578700 EGFEM1PQ0D2K5 195 aa7.82□□□□□ -1.16
SS18-210ENST00000578700 KIAA0141Q14154 515 aaPredicted RBP7.82□□□□□ -1.16
SS18-210ENST00000578700 C19orf54Q5BKX5 351 aa7.82□□□□□ -1.16
SS18-210ENST00000578700 LINC00482Q8N8I6 264 aa7.82□□□□□ -1.16
SS18-210ENST00000578700 ZNF491Q8N8L2 437 aa7.82□□□□□ -1.16
SS18-210ENST00000578700 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.82□□□□□ -1.16
SS18-210ENST00000578700 FAM167A-AS1Q96KT0 104 aa7.82□□□□□ -1.16
SS18-210ENST00000578700 SHANK2-AS3Q9BTD1 123 aa7.82□□□□□ -1.16
SS18-210ENST00000578700 GPR61Q9BZJ8 451 aa7.82□□□□□ -1.16
SS18-210ENST00000578700 PARLQ9H300 379 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms