RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 IGHV3OR16-8A0A075B7F1 116 aa14.27□□□□□ -0.13
PRKCA-203ENST00000578063 F6UZH7 168 aa14.27□□□□□ -0.13
PRKCA-203ENST00000578063 APOC3P02656 99 aa14.27□□□□□ -0.13
PRKCA-203ENST00000578063 NBEAP1P0C6P0 100 aa14.27□□□□□ -0.13
PRKCA-203ENST00000578063 HIST1H1EP10412 219 aaKnown RBP14.27□□□□□ -0.13
PRKCA-203ENST00000578063 RPL7P18124 248 aaKnown RBP14.27□□□□□ -0.13
PRKCA-203ENST00000578063 LINC01006Q8NI28 216 aa14.27□□□□□ -0.13
PRKCA-203ENST00000578063 WIPF2Q8TF74 440 aaPredicted RBP14.27□□□□□ -0.13
PRKCA-203ENST00000578063 TMEM190Q8WZ59 177 aa14.27□□□□□ -0.13
PRKCA-203ENST00000578063 C20orf24Q9BUV8 137 aa14.27□□□□□ -0.13
PRKCA-203ENST00000578063 NPPCP23582 126 aa14.26□□□□□ -0.13
PRKCA-203ENST00000578063 CRYBB3P26998 211 aa14.26□□□□□ -0.13
PRKCA-203ENST00000578063 CEBPGP53567 150 aa14.26□□□□□ -0.13
PRKCA-203ENST00000578063 CDX1P47902 265 aaPredicted RBP14.25□□□□□ -0.13
PRKCA-203ENST00000578063 MRPS12O15235 138 aaKnown RBP14.24□□□□□ -0.13
PRKCA-203ENST00000578063 BUB3O43684 328 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 IGLC2P0DOY2 106 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 FAM106AQ4KMX7 169 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 C1orf194Q5T5A4 169 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 FAM90A2PQ658T7 463 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 UNQ9165/PRO28630Q6UXU0 137 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 GPHB5Q86YW7 130 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 OR8I2Q8N0Y5 310 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 SVBPQ8N300 66 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 WFDC12Q8WWY7 111 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 GPR82Q96P67 336 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 GGTLC3B5MD39 225 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 RPEL1Q2QD12 228 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 TCTEX1D4Q5JR98 221 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 CCDC28AQ8IWP9 274 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 BLNKQ8WV28 456 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 U3KQE9 123 aa14.24□□□□□ -0.13
PRKCA-203ENST00000578063 C4orf3Q8WVX3 66 aa14.23□□□□□ -0.13
PRKCA-203ENST00000578063 TCEAL7Q9BRU2 100 aa14.23□□□□□ -0.13
PRKCA-203ENST00000578063 ZNF586Q9NXT0 402 aa14.23□□□□□ -0.13
PRKCA-203ENST00000578063 F8P00451 2351 aa14.23□□□□□ -0.13
PRKCA-203ENST00000578063 H3BQ15 152 aa14.22□□□□□ -0.13
PRKCA-203ENST00000578063 KHDC1LQ5JSQ8 128 aa14.22□□□□□ -0.13
PRKCA-203ENST00000578063 C11orf52Q96A22 123 aa14.22□□□□□ -0.13
PRKCA-203ENST00000578063 FN1P02751 2386 aaKnown RBP14.22□□□□□ -0.13
PRKCA-203ENST00000578063 TRBV19A0A075B6N1 114 aa14.21□□□□□ -0.13
PRKCA-203ENST00000578063 ZNF320A2RRD8 509 aa14.21□□□□□ -0.13
PRKCA-203ENST00000578063 ZNF207O43670 478 aaKnown RBP14.21□□□□□ -0.13
PRKCA-203ENST00000578063 SUMO1P63165 101 aaKnown RBP14.21□□□□□ -0.13
PRKCA-203ENST00000578063 PDE6HQ13956 83 aa14.21□□□□□ -0.13
PRKCA-203ENST00000578063 GUCA2BQ16661 112 aa14.21□□□□□ -0.13
PRKCA-203ENST00000578063 FAM74A3Q4VXF1 159 aa14.21□□□□□ -0.13
PRKCA-203ENST00000578063 NIPSNAP3BQ9BS92 247 aa14.21□□□□□ -0.13
PRKCA-203ENST00000578063 DAZ1Q9NQZ3 744 aaKnown RBP14.21□□□□□ -0.13
PRKCA-203ENST00000578063 SCO2A0A1W2PP80 73 aa14.21□□□□□ -0.14
PRKCA-203ENST00000578063 K7EMT4 169 aa14.21□□□□□ -0.14
PRKCA-203ENST00000578063 SNRPCP09234 159 aaKnown RBP14.21□□□□□ -0.14
PRKCA-203ENST00000578063 MYCNOSP40205 109 aa14.21□□□□□ -0.14
PRKCA-203ENST00000578063 RANP62826 216 aaKnown RBP14.21□□□□□ -0.14
PRKCA-203ENST00000578063 RPUSD4Q96CM3 377 aaKnown RBP14.21□□□□□ -0.14
PRKCA-203ENST00000578063 PARLQ9H300 379 aa14.21□□□□□ -0.14
PRKCA-203ENST00000578063 UFC1Q9Y3C8 167 aa14.21□□□□□ -0.14
PRKCA-203ENST00000578063 IGHV4OR15-8A0A075B7B6 117 aa14.2□□□□□ -0.14
PRKCA-203ENST00000578063 A0A087WW49 117 aa14.2□□□□□ -0.14
PRKCA-203ENST00000578063 A0A1W2PS18 150 aa14.2□□□□□ -0.14
PRKCA-203ENST00000578063 SNAPINO95295 136 aa14.2□□□□□ -0.14
PRKCA-203ENST00000578063 ATF4P18848 351 aaPredicted RBP14.2□□□□□ -0.14
PRKCA-203ENST00000578063 GALR1P47211 349 aa14.2□□□□□ -0.14
PRKCA-203ENST00000578063 LYPD1Q8N2G4 141 aa14.2□□□□□ -0.14
PRKCA-203ENST00000578063 GRAMD2BQ96HH9 432 aa14.2□□□□□ -0.14
PRKCA-203ENST00000578063 SMIM7Q9BQ49 75 aa14.2□□□□□ -0.14
PRKCA-203ENST00000578063 RNF114Q9Y508 228 aa14.2□□□□□ -0.14
PRKCA-203ENST00000578063 NF1P21359 2839 aa14.19□□□□□ -0.14
PRKCA-203ENST00000578063 ZNF727A8MUV8 499 aa14.19□□□□□ -0.14
PRKCA-203ENST00000578063 H3BTX0 84 aa14.19□□□□□ -0.14
PRKCA-203ENST00000578063 APOHP02749 345 aaPredicted RBP14.19□□□□□ -0.14
PRKCA-203ENST00000578063 REC114Q7Z4M0 266 aa14.19□□□□□ -0.14
PRKCA-203ENST00000578063 ELOVL1Q9BW60 279 aa14.19□□□□□ -0.14
PRKCA-203ENST00000578063 Q9H3A6 140 aa14.19□□□□□ -0.14
PRKCA-203ENST00000578063 OTORQ9NRC9 128 aa14.19□□□□□ -0.14
PRKCA-203ENST00000578063 CUBNO60494 3623 aa14.19□□□□□ -0.14
PRKCA-203ENST00000578063 A0A087X0K7 114 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 NDUFB4O95168 129 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 HOXD3P31249 432 aaPredicted RBP14.18□□□□□ -0.14
PRKCA-203ENST00000578063 ZNF674Q2M3X9 581 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 C16orf54Q6UWD8 224 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 KLHL30-AS1Q8NEE0 82 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 IGHV3-49A0A0A0MS15 119 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 IGHV3-66A0A0C4DH42 116 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 IGHV7-4-1A0A0J9YVY3 117 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 LGALS9O00182 355 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 ZNF253O75346 499 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 MEOX2P50222 304 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 PROK1P58294 105 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 C18orf65Q6ZTR6 163 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 C5orf17Q8NAS9 161 aa14.18□□□□□ -0.14
PRKCA-203ENST00000578063 IGHV3OR16-13A0A075B7E8 117 aa14.17□□□□□ -0.14
PRKCA-203ENST00000578063 IGHV3-74A0A0B4J1X5 117 aa14.17□□□□□ -0.14
PRKCA-203ENST00000578063 PGPA6NDG6 321 aa14.17□□□□□ -0.14
PRKCA-203ENST00000578063 A8MWP6 167 aa14.17□□□□□ -0.14
PRKCA-203ENST00000578063 LINC01619G3V211 115 aa14.17□□□□□ -0.14
PRKCA-203ENST00000578063 CD28P10747 220 aa14.17□□□□□ -0.14
PRKCA-203ENST00000578063 BMI1P35226 326 aa14.17□□□□□ -0.14
PRKCA-203ENST00000578063 SIGLEC15Q6ZMC9 328 aa14.17□□□□□ -0.14
PRKCA-203ENST00000578063 C1QL4Q86Z23 238 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms