RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 STAG3L3P0CL85 134 aa7.71□□□□□ -1.18
CRLF3-202ENST00000577725 PYYP10082 97 aa7.71□□□□□ -1.18
CRLF3-202ENST00000577725 UBE2G2P60604 165 aa7.71□□□□□ -1.18
CRLF3-202ENST00000577725 RPL15P61313 204 aaKnown RBP7.71□□□□□ -1.18
CRLF3-202ENST00000577725 DEFB136Q30KP8 78 aa7.71□□□□□ -1.18
CRLF3-202ENST00000577725 IL34Q6ZMJ4 242 aa7.71□□□□□ -1.18
CRLF3-202ENST00000577725 RNF152Q8N8N0 203 aa7.71□□□□□ -1.18
CRLF3-202ENST00000577725 WIPF2Q8TF74 440 aaPredicted RBP7.71□□□□□ -1.18
CRLF3-202ENST00000577725 ZNF503Q96F45 646 aa7.71□□□□□ -1.18
CRLF3-202ENST00000577725 FAM167A-AS1Q96KT0 104 aa7.71□□□□□ -1.18
CRLF3-202ENST00000577725 PFDN5Q99471 154 aa7.71□□□□□ -1.18
CRLF3-202ENST00000577725 RARRES2Q99969 163 aa7.71□□□□□ -1.18
CRLF3-202ENST00000577725 C20orf24Q9BUV8 137 aa7.71□□□□□ -1.18
CRLF3-202ENST00000577725 MRPL32Q9BYC8 188 aaKnown RBP7.71□□□□□ -1.18
CRLF3-202ENST00000577725 SLC25A39Q9BZJ4 359 aaPredicted RBP7.71□□□□□ -1.18
CRLF3-202ENST00000577725 GAR1Q9NY12 217 aaKnown RBP7.71□□□□□ -1.18
CRLF3-202ENST00000577725 TECRQ9NZ01 308 aaKnown RBP7.71□□□□□ -1.18
CRLF3-202ENST00000577725 MRPL27Q9P0M9 148 aaKnown RBP7.71□□□□□ -1.18
CRLF3-202ENST00000577725 PEF1Q9UBV8 284 aaKnown RBP7.71□□□□□ -1.18
CRLF3-202ENST00000577725 DNAH1Q9P2D7 4330 aa7.71□□□□□ -1.18
CRLF3-202ENST00000577725 RYR1P21817 5038 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 IGHV4OR15-8A0A075B7B6 117 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 IGHV3OR16-13A0A075B7E8 117 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 A0A087WW49 117 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 IGHV3-74A0A0B4J1X5 117 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 IGHV3-66A0A0C4DH42 116 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 H3BTX0 84 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 OR7C2O60412 319 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 OR10J4P0C629 311 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 C8orf88P0DMB2 117 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 GCHFRP30047 84 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 RELQ04864 619 aaPredicted RBP7.7□□□□□ -1.18
CRLF3-202ENST00000577725 GUK1Q16774 197 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 UNQ9165/PRO28630Q6UXU0 137 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 DUX3Q96PT4 197 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 RNF2Q99496 336 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 RNF114Q9Y508 228 aa7.7□□□□□ -1.18
CRLF3-202ENST00000577725 NOTCH3Q9UM47 2321 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 ELOA3CA0A087WX78 387 aaPredicted RBP7.69□□□□□ -1.18
CRLF3-202ENST00000577725 LCE6AA0A183 80 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 LOC102723971A0A1B0GUV8 181 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 NUDT19A8MXV4 375 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 C9JQL5 133 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 GGCTO75223 188 aaKnown RBP7.69□□□□□ -1.18
CRLF3-202ENST00000577725 CXorf1O96002 111 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 APOHP02749 345 aaPredicted RBP7.69□□□□□ -1.18
CRLF3-202ENST00000577725 EDN2P20800 178 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 KHDC3LQ587J8 217 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 COMMD1Q8N668 190 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 KLHL30-AS1Q8NEE0 82 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 RXFP4Q8TDU9 374 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 UBE2E2Q96LR5 201 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 FAM210AQ96ND0 272 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 ATP6V0BQ99437 205 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 CITED2Q99967 270 aaPredicted RBP7.69□□□□□ -1.18
CRLF3-202ENST00000577725 SHANK2-AS3Q9BTD1 123 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 PAXXQ9BUH6 204 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 TREM1Q9NP99 234 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 RABAC1Q9UI14 185 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 SELENOKQ9Y6D0 94 aa7.69□□□□□ -1.18
CRLF3-202ENST00000577725 ZNF320A2RRD8 509 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 RAB19A4D1S5 217 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 RBFOX3A6NFN3 312 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 ZNF98A6NK75 572 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 I3L521 148 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 PAGE4O60829 102 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 BCL2P10415 239 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 S100A1P23297 94 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 SLURP1P55000 103 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 PROK1P58294 105 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 TAS2R45P59539 299 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 UBE2L3P68036 154 aaKnown RBP7.68□□□□□ -1.18
CRLF3-202ENST00000577725 ICAM4Q14773 271 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 KRTAP3-3Q9BYR6 98 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 KRTAP3-2Q9BYR7 98 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 EIF5A2Q9GZV4 153 aaKnown RBP7.68□□□□□ -1.18
CRLF3-202ENST00000577725 OR51M1Q9H341 326 aa7.68□□□□□ -1.18
CRLF3-202ENST00000577725 YTHDF2Q9Y5A9 579 aaKnown RBP7.68□□□□□ -1.18
CRLF3-202ENST00000577725 J3QL48 77 aa7.67□□□□□ -1.18
CRLF3-202ENST00000577725 NDUFA4O00483 81 aa7.67□□□□□ -1.18
CRLF3-202ENST00000577725 IFNA1P01562 189 aa7.67□□□□□ -1.18
CRLF3-202ENST00000577725 PRB4P10163 310 aaPredicted RBP7.67□□□□□ -1.18
CRLF3-202ENST00000577725 GP9P14770 177 aa7.67□□□□□ -1.18
CRLF3-202ENST00000577725 TNP2Q05952 138 aa7.67□□□□□ -1.18
CRLF3-202ENST00000577725 RPEL1Q2QD12 228 aa7.67□□□□□ -1.18
CRLF3-202ENST00000577725 ZNF506Q5JVG8 444 aa7.67□□□□□ -1.18
CRLF3-202ENST00000577725 C8orf86Q6ZUL3 223 aa7.67□□□□□ -1.18
CRLF3-202ENST00000577725 EIF4E3Q8N5X7 224 aaKnown RBP7.67□□□□□ -1.18
CRLF3-202ENST00000577725 BLNKQ8WV28 456 aa7.67□□□□□ -1.18
CRLF3-202ENST00000577725 C4orf3Q8WVX3 66 aa7.67□□□□□ -1.18
CRLF3-202ENST00000577725 TMEM190Q8WZ59 177 aa7.67□□□□□ -1.18
CRLF3-202ENST00000577725 FXYD5Q96DB9 178 aa7.67□□□□□ -1.18
CRLF3-202ENST00000577725 NARS2Q96I59 477 aaKnown RBP7.67□□□□□ -1.18
CRLF3-202ENST00000577725 DNAH3Q8TD57 4116 aa7.66□□□□□ -1.18
CRLF3-202ENST00000577725 HOXD3P31249 432 aaPredicted RBP7.66□□□□□ -1.18
CRLF3-202ENST00000577725 CDX1P47902 265 aaPredicted RBP7.66□□□□□ -1.18
CRLF3-202ENST00000577725 ATP5G3P48201 142 aa7.66□□□□□ -1.18
CRLF3-202ENST00000577725 CEBPGP53567 150 aa7.66□□□□□ -1.18
CRLF3-202ENST00000577725 SYNJ2BPP57105 145 aa7.66□□□□□ -1.18
CRLF3-202ENST00000577725 NSUN5P1Q3KNT7 163 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms