RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 SBF1O95248 1867 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 RALGAPBQ86X10 1494 aa2.15□□□□□ -2.06
SMCHD1-202ENST00000577300 PARP14Q460N5 1801 aa2.15□□□□□ -2.06
SMCHD1-202ENST00000577300 BRWD3Q6RI45 1802 aa2.15□□□□□ -2.06
SMCHD1-202ENST00000577300 TRAV27A0A087WT01 109 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 TLCD2A6NGC4 264 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 C11orf94C9JXX5 98 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 H3BUT2 72 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 J3QT63 122 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 ISLRO14498 428 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 HLA-DRB1P01911 266 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 CRYGSP22914 178 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 CBLN1P23435 193 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 HLA-DMBP28068 263 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 SDC2P34741 201 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 CA7P43166 264 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 TAS2R19P59542 299 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 TMEM258P61165 79 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 RPS11P62280 158 aaKnown RBP eCLIP2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 FKBP1AP62942 108 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 HBG1P69891 147 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 HBG2P69892 147 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 MPV17LQ2QL34 196 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 VMA21Q3ZAQ7 101 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 ABCA11PQ4W5N1 156 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 KLF17Q5JT82 389 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 LCN8Q6JVE9 175 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 C22orf39Q6P5X5 142 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 COMMD6Q7Z4G1 85 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 PRR15Q8IV56 129 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 TMEM256Q8N2U0 113 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 OR10P1Q8NGE3 313 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 UBALD1Q8TB05 177 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 SCGB1C1Q8TD33 95 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 GNPNAT1Q96EK6 184 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 C18orf15Q96N68 181 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 PRSS27Q9BQR3 290 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 SPANXDQ9BXN6 97 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 SLC35B3Q9H1N7 401 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 SMDT1Q9H4I9 107 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 CRCT1Q9UGL9 99 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 NOP16Q9Y3C1 178 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 HES2Q9Y543 173 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 DNAJC15Q9Y5T4 150 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 PIK3C2BO00750 1634 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 AGLP35573 1532 aa2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 BAZ2AQ9UIF9 1905 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-202ENST00000577300 TNRC6AQ8NDV7 1962 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 CABIN1Q9Y6J0 2220 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 ADCY10Q96PN6 1610 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 ARHGAP5Q13017 1502 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 EHBP1L1Q8N3D4 1523 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 TRBV19A0A075B6N1 114 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 TRAV13-1A0A0B4J241 112 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 TRAV1-1A0A0B4J248 108 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 A0A0D9SEW6 157 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 C3orf85A0A1B0GTC6 90 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 RBAKDNA6NC62 111 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 NAP1L6A6NFF2 107 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 LINC01619G3V211 115 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 SYS1-DBNDD2H3BUS1 97 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 K7EM74 188 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 TRACP01848 142 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 LGALS2P05162 132 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 IGKV4-1P06312 121 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 PYYP10082 97 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 FABP2P12104 132 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 TPT1P13693 172 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 PPIBP23284 216 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 RPL22P35268 128 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 PSMB3P49720 205 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 TAS2R45P59539 299 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 CACNG7P62955 275 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 PMCHL1Q16048 86 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 LINC00303Q3SY05 128 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 ETDBQ3ZM63 59 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 Q56UQ5 140 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 MRPL2Q5T653 305 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 AAED1Q7RTV5 226 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 NKAPP1Q8N9T2 125 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 WFDC11Q8NEX6 87 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 OR5H2Q8NGV7 314 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 OR51H1Q8NH63 302 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 DCANP1Q8TF63 244 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 TVP23CQ96ET8 276 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 COMMD5Q9GZQ3 224 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 PLEKHF2Q9H8W4 249 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 HHLA3Q9XRX5 114 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 PXMP4Q9Y6I8 212 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 ADAMTS13Q76LX8 1427 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 TRIP11Q15643 1979 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 IFT172Q9UG01 1749 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 CCDC88AQ3V6T2 1871 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 C1orf167Q5SNV9 1468 aa2.14□□□□□ -2.07
SMCHD1-202ENST00000577300 KIAA0556O60303 1618 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 KDM3BQ7LBC6 1761 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 NFAT5O94916 1531 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 ABCC1P33527 1531 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 KIAA0586Q9BVV6 1533 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 QRICH2Q9H0J4 1663 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms