RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	DLEU1	O43261	78 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	CRYAB	P02511	175 aa	Known RBP	11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	OR8A1	Q8NGG7	326 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	PERP	Q96FX8	193 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	RASL11B	Q9BPW5	248 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	TXNDC17	Q9BRA2	123 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	CCL21	O00585	134 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGLC2	P0DOY2	106 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGLC3	P0DOY3	106 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	HTR1D	P28221	377 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001		Q8NA96	180 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	LAMTOR2	Q9Y2Q5	125 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	MYO18B	Q8IUG5	2567 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGHV1-3	A0A0C4DH29	117 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	CEACAM8	P31997	349 aa	Predicted RBP	11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	PRRX1	P54821	245 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001		Q0VG73	95 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	TM4SF20	Q53R12	229 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	PPP1R27	Q86WC6	154 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	C22orf15	Q8WYQ4	148 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	TMUB1	Q9BVT8	246 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	RAB9B	Q9NP90	201 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	CELSR2	Q9HCU4	2923 aa		11.78	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.77	□□□□□ -0.52
PRPF8-216	ENST00000577001	NCR2	O95944	276 aa		11.77	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGKV2D-40	P01614	121 aa	Predicted RBP	11.77	□□□□□ -0.52
PRPF8-216	ENST00000577001	OR8B3	Q8NGG8	313 aa		11.77	□□□□□ -0.52
PRPF8-216	ENST00000577001	URB1-AS1	Q96HZ7	61 aa		11.77	□□□□□ -0.52
PRPF8-216	ENST00000577001	SIGLEC9	Q9Y336	463 aa		11.77	□□□□□ -0.52
PRPF8-216	ENST00000577001	HIGD1A	Q9Y241	93 aa		11.77	□□□□□ -0.53
PRPF8-216	ENST00000577001	USP9X	Q93008	2570 aa	Predicted RBP	11.77	□□□□□ -0.53
PRPF8-216	ENST00000577001	TMEM213	A2RRL7	107 aa		11.77	□□□□□ -0.53
PRPF8-216	ENST00000577001	OR4C46	A6NHA9	309 aa		11.77	□□□□□ -0.53
PRPF8-216	ENST00000577001	PTTG1IP	P53801	180 aa		11.77	□□□□□ -0.53
PRPF8-216	ENST00000577001	LOXL1	Q08397	574 aa	Predicted RBP	11.77	□□□□□ -0.53
PRPF8-216	ENST00000577001	MRGPRG-AS1	Q2M3A8	158 aa		11.77	□□□□□ -0.53
PRPF8-216	ENST00000577001	MPV17L2	Q567V2	206 aa		11.77	□□□□□ -0.53
PRPF8-216	ENST00000577001	GRAMD2B	Q96HH9	432 aa		11.77	□□□□□ -0.53
PRPF8-216	ENST00000577001		A0A087X0K7	114 aa		11.76	□□□□□ -0.53
PRPF8-216	ENST00000577001		K7EMI3	77 aa		11.76	□□□□□ -0.53
PRPF8-216	ENST00000577001	TCRA	P04437	139 aa		11.76	□□□□□ -0.53
PRPF8-216	ENST00000577001	S100A7	P31151	101 aa		11.76	□□□□□ -0.53
PRPF8-216	ENST00000577001	TEX36	Q5VZQ5	186 aa		11.76	□□□□□ -0.53
PRPF8-216	ENST00000577001	GPR82	Q96P67	336 aa		11.76	□□□□□ -0.53
PRPF8-216	ENST00000577001	RBM14	Q96PK6	669 aa	Known RBP	11.76	□□□□□ -0.53
PRPF8-216	ENST00000577001	OR2T8	A6NH00	312 aa		11.76	□□□□□ -0.53
PRPF8-216	ENST00000577001	SHISA9	B4DS77	424 aa		11.76	□□□□□ -0.53
PRPF8-216	ENST00000577001	NDUFB8	O95169	186 aa		11.76	□□□□□ -0.53
PRPF8-216	ENST00000577001	HIST1H1E	P10412	219 aa	Known RBP	11.76	□□□□□ -0.53
PRPF8-216	ENST00000577001	TMEM186	Q96B77	213 aa		11.76	□□□□□ -0.53
PRPF8-216	ENST00000577001	OR2J3	O76001	311 aa		11.75	□□□□□ -0.53
PRPF8-216	ENST00000577001	POU2AF1	Q16633	256 aa		11.75	□□□□□ -0.53
PRPF8-216	ENST00000577001	VSTM2A	Q8TAG5	236 aa		11.75	□□□□□ -0.53
PRPF8-216	ENST00000577001	C18orf15	Q96N68	181 aa		11.75	□□□□□ -0.53
PRPF8-216	ENST00000577001	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.75	□□□□□ -0.53
PRPF8-216	ENST00000577001	RPP21	Q9H633	154 aa	Known RBP	11.75	□□□□□ -0.53
PRPF8-216	ENST00000577001	SON	P18583	2426 aa	Known RBP	11.75	□□□□□ -0.53
PRPF8-216	ENST00000577001	TMEM249	Q2WGJ8	235 aa		11.75	□□□□□ -0.53
PRPF8-216	ENST00000577001	CACNG8	Q8WXS5	425 aa		11.75	□□□□□ -0.53
PRPF8-216	ENST00000577001	SCNM1	Q9BWG6	230 aa		11.75	□□□□□ -0.53
PRPF8-216	ENST00000577001	LEPROTL1	O95214	131 aa		11.74	□□□□□ -0.53
PRPF8-216	ENST00000577001	NUDT3	O95989	172 aa		11.74	□□□□□ -0.53
PRPF8-216	ENST00000577001	HBB	P68871	147 aa		11.74	□□□□□ -0.53
PRPF8-216	ENST00000577001	VAMP3	Q15836	100 aa		11.74	□□□□□ -0.53
PRPF8-216	ENST00000577001	TMEM155	Q4W5P6	130 aa		11.74	□□□□□ -0.53
PRPF8-216	ENST00000577001	OR4B1	Q8NGF8	309 aa		11.74	□□□□□ -0.53
PRPF8-216	ENST00000577001	C20orf144	Q9BQM9	153 aa		11.74	□□□□□ -0.53
PRPF8-216	ENST00000577001	UQCR10	Q9UDW1	63 aa		11.74	□□□□□ -0.53
PRPF8-216	ENST00000577001	C2CD3	Q4AC94	2353 aa		11.74	□□□□□ -0.53
PRPF8-216	ENST00000577001	TSPO	P30536	169 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	FLNC	Q14315	2725 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	NPIPB5	A8MRT5	1133 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	MT-ND6	P03923	174 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	CD3E	P07766	207 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	COL5A1-AS1	Q5SY13	56 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	PRSS57	Q6UWY2	283 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	MRPL32	Q9BYC8	188 aa	Known RBP	11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	ZAN	Q9Y493	2812 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	IGHV1-24	A0A0C4DH33	117 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	GNG7	O60262	68 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	FSTL3	O95633	263 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	APOH	P02749	345 aa	Predicted RBP	11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	BTF3	P20290	206 aa	Known RBP	11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	DEFB1	P60022	68 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	ECSCR	Q19T08	205 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001		Q6ZQT7	251 aa		11.73	□□□□□ -0.53
PRPF8-216	ENST00000577001	WNK1	Q9H4A3	2382 aa		11.72	□□□□□ -0.53
PRPF8-216	ENST00000577001	BUB1B-PAK6	H3BSN5	160 aa		11.72	□□□□□ -0.53
PRPF8-216	ENST00000577001	GAS8-AS1	O95177	125 aa		11.72	□□□□□ -0.53
PRPF8-216	ENST00000577001	IGKV1-17	P01599	117 aa		11.72	□□□□□ -0.53
PRPF8-216	ENST00000577001	TCF15	Q12870	199 aa		11.72	□□□□□ -0.53
PRPF8-216	ENST00000577001	MYO9A	B2RTY4	2548 aa		11.72	□□□□□ -0.53
PRPF8-216	ENST00000577001	DNLZ	Q5SXM8	178 aa		11.72	□□□□□ -0.53
PRPF8-216	ENST00000577001	PRSS3P2	Q8NHM4	247 aa		11.72	□□□□□ -0.53
PRPF8-216	ENST00000577001	MSRB1	Q9NZV6	116 aa		11.72	□□□□□ -0.53
PRPF8-216	ENST00000577001	CCL25	O15444	150 aa		11.71	□□□□□ -0.53
PRPF8-216	ENST00000577001	CEACAM4	O75871	244 aa		11.71	□□□□□ -0.53
PRPF8-216	ENST00000577001	GP9	P14770	177 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms