RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 GRAMD2BQ96HH9 432 aa4.18□□□□□ -1.74
SMG6-219ENST00000575663 ZNF414Q96IQ9 312 aa4.18□□□□□ -1.74
SMG6-219ENST00000575663 ALKBH7Q9BT30 221 aaPredicted RBP4.18□□□□□ -1.74
SMG6-219ENST00000575663 MED28Q9H204 178 aa4.18□□□□□ -1.74
SMG6-219ENST00000575663 EHFQ9NZC4 300 aa4.18□□□□□ -1.74
SMG6-219ENST00000575663 GSKIPQ9P0R6 139 aa4.18□□□□□ -1.74
SMG6-219ENST00000575663 DUXBA0A1W2PPF3 345 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 SMIM9A6NGZ8 99 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 CGB1A6NKQ9 187 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 KNCNA6PVL3 124 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 FAM229AH3BQW9 127 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 EIF3GO75821 320 aaKnown RBP eCLIP4.17□□□□□ -1.74
SMG6-219ENST00000575663 SERPINE2P07093 398 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 FGF2P09038 288 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 METTL15P1P0C7V9 234 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 ZNF688P0C7X2 276 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 OR13C7P0DN81 318 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 SCGB1A1P11684 91 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 ZNF25P17030 456 aaPredicted RBP4.17□□□□□ -1.74
SMG6-219ENST00000575663 GNRHRP30968 328 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 CCR6P51684 374 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 CCL18P55774 89 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 HERV-K104P61576 105 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 RND3P61587 244 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 RPL30P62888 115 aaKnown RBP4.17□□□□□ -1.74
SMG6-219ENST00000575663 CYCSP99999 105 aaKnown RBP4.17□□□□□ -1.74
SMG6-219ENST00000575663 FAM222AQ5U5X8 452 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 AADACL3Q5VUY0 350 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 CDPF1Q6NVV7 123 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 GSG1LQ6UXU4 331 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 COMMD7Q86VX2 200 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 TCTE3Q8IZS6 198 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 FAM24BQ8N5W8 94 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 LRTM2Q8N967 370 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 CCDC71LQ8N9Z2 235 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 STXBP6Q8NFX7 210 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 OR13C8Q8NGS7 320 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 ZNF431Q8TF32 576 aaPredicted RBP4.17□□□□□ -1.74
SMG6-219ENST00000575663 SCARB1Q8WTV0 552 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 LSM10Q969L4 123 aaKnown RBP4.17□□□□□ -1.74
SMG6-219ENST00000575663 GGACTQ9BVM4 153 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 VSIRQ9H7M9 311 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 DKK2Q9UBU2 259 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 CACFD1Q9UGQ2 172 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 FLVCR2Q9UPI3 526 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 C14orf166Q9Y224 244 aaKnown RBP4.17□□□□□ -1.74
SMG6-219ENST00000575663 OR2W1Q9Y3N9 320 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 TNFRSF18Q9Y5U5 241 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 F11RQ9Y624 299 aaKnown RBP4.17□□□□□ -1.74
SMG6-219ENST00000575663 RFNGQ9Y644 331 aa4.17□□□□□ -1.74
SMG6-219ENST00000575663 A0A1W2PS18 150 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 MEIS3P1A6NDR6 274 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 SMLR1H3BR10 107 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 K7EIM0 57 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 M0QYG6 137 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 EREGO14944 169 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 SSNA1O43805 119 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 GNG7O60262 68 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 PPYP01298 95 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 PMP2P02689 132 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 RLN1P04808 185 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 CTSGP08311 255 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 GIPP09681 153 aaPredicted RBP4.16□□□□□ -1.74
SMG6-219ENST00000575663 SULT1A3P0DMM9 295 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 SULT1A4P0DMN0 295 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 FCGR2CP31995 323 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 MFAP4P55083 255 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 RAB5BP61020 215 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 RAP2BP61225 183 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 DAD1P61803 113 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 PKIAP61925 76 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 FGL1Q08830 312 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 SCGB2B2Q4G0G5 96 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 RNASE12Q5GAN4 147 aaKnown RBP4.16□□□□□ -1.74
SMG6-219ENST00000575663 MRPL52Q86TS9 123 aaKnown RBP4.16□□□□□ -1.74
SMG6-219ENST00000575663 NOXA1Q86UR1 476 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 HSD17B11Q8NBQ5 300 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 COQ8AQ8NI60 647 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 RBPMSQ93062 196 aaKnown RBP4.16□□□□□ -1.74
SMG6-219ENST00000575663 IL22RA2Q969J5 263 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 HYLS1Q96M11 299 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 C17orf77Q96MU5 243 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 VPS25Q9BRG1 176 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 XCL2Q9UBD3 114 aa4.16□□□□□ -1.74
SMG6-219ENST00000575663 IGHV3OR16-12A0A075B7B8 117 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 IGHV3-66A0A0C4DH42 116 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 RPS10-NUDT3A0A1W2PQS6 291 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 ZNF705FA8MVS1 300 aaPredicted RBP4.15□□□□□ -1.75
SMG6-219ENST00000575663 K7EP13 123 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 K7EQG2 157 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 GPR31O00270 319 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 UPK2O00526 184 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 GOSR2O14653 212 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 ATG12O94817 140 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 SFT2D2O95562 160 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 NUDT3O95989 172 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 IFNA7P01567 189 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 IFNA5P01569 189 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 RLN2P04090 185 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 H2AFB1P0C5Y9 115 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms