RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 ZNF502Q8TBZ5 544 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 TMEM18Q96B42 140 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 AJUBAQ96IF1 538 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 GFRA4Q9GZZ7 299 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 AURKAIP1Q9NWT8 199 aaPredicted RBP5.34□□□□□ -1.55
SMG6-217ENST00000575338 NBEAQ8NFP9 2946 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 HRNRQ86YZ3 2850 aaPredicted RBP5.33□□□□□ -1.56
SMG6-217ENST00000575338 A0A0G2JLM5 398 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 XKRY2A2RUG3 117 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 OR2T8A6NH00 312 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 IGLV2-8P01709 118 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 P01737 135 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 IGF1P05019 195 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 CTSGP08311 255 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 EGR2P11161 476 aaPredicted RBP5.33□□□□□ -1.56
SMG6-217ENST00000575338 RPL15P61313 204 aaKnown RBP5.33□□□□□ -1.56
SMG6-217ENST00000575338 OR5I1Q13606 314 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 SAPCD1Q5SSQ6 148 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 FAM120AOSQ5T036 256 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 Q6AWC8 147 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 C19orf35Q6ZS72 473 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 OR8I2Q8N0Y5 310 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 WIPF2Q8TF74 440 aaPredicted RBP5.33□□□□□ -1.56
SMG6-217ENST00000575338 TSKUQ8WUA8 353 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 METTL26Q96S19 204 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 HSPB9Q9BQS6 159 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 SLC50A1Q9BRV3 221 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 NDFIP1Q9BT67 221 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 GSX1Q9H4S2 264 aaPredicted RBP5.33□□□□□ -1.56
SMG6-217ENST00000575338 RPP21Q9H633 154 aaKnown RBP5.33□□□□□ -1.56
SMG6-217ENST00000575338 HIF1ANQ9NWT6 349 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 ZNF586Q9NXT0 402 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 RPH3ALQ9UNE2 315 aa5.33□□□□□ -1.56
SMG6-217ENST00000575338 HELZ2Q9BYK8 2649 aaKnown RBP5.32□□□□□ -1.56
SMG6-217ENST00000575338 A0A087X0K7 114 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 A0A1B0GW15 77 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 TMEM89A2RUT3 159 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 A6NDX4 124 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 SNURFLB1AK76 121 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 SLC17A3O00476 420 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 PHOX2AO14813 284 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 IGHG2P01859 326 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 TRGV3P03979 118 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 COL8A1P27658 744 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 GPR183P32249 361 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 BMI1P35226 326 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 PAFAH1B2P68402 229 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 OR10J3Q5JRS4 329 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 KLF17Q5JT82 389 aaPredicted RBP5.32□□□□□ -1.56
SMG6-217ENST00000575338 SAMD13Q5VXD3 122 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 CYB5R2Q6BCY4 276 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 PRSS57Q6UWY2 283 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 SIGLEC15Q6ZMC9 328 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 Q86TA4 180 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 HIST3H2BBQ8N257 126 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 CIARTQ8N365 385 aaPredicted RBP5.32□□□□□ -1.56
SMG6-217ENST00000575338 GBGT1Q8N5D6 347 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 BORCS7Q96B45 105 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 ZNF414Q96IQ9 312 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 MLST8Q9BVC4 326 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 MRPL18Q9H0U6 180 aaKnown RBP5.32□□□□□ -1.56
SMG6-217ENST00000575338 RNASE7Q9H1E1 156 aaKnown RBP5.32□□□□□ -1.56
SMG6-217ENST00000575338 GNB4Q9HAV0 340 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 ITPR1Q14643 2758 aa5.32□□□□□ -1.56
SMG6-217ENST00000575338 LRBAP50851 2863 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 A0A1W2PS18 150 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 ZNF785A8K8V0 405 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 DIRC3C9JPN6 131 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 F8W735 103 aaPredicted RBP5.31□□□□□ -1.56
SMG6-217ENST00000575338 H3BUX3 64 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 MRPS12O15235 138 aaKnown RBP5.31□□□□□ -1.56
SMG6-217ENST00000575338 CLEC3BP05452 202 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 CRISP2P16562 243 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 IER3P46695 156 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 RPS20P60866 119 aaKnown RBP5.31□□□□□ -1.56
SMG6-217ENST00000575338 RAB4BP61018 213 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 GNG5P63218 68 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 PSG3Q16557 428 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 DEFB113Q30KQ7 82 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 C9orf152Q5JTZ5 239 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 RUSC1-AS1Q66K80 236 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 LEMD1Q68G75 181 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 PRR27Q6MZM9 219 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 BRD3OSQ6XYD6 125 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 GOLT1AQ6ZVE7 132 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 NUDT10Q8NFP7 164 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 MRPL53Q96EL3 112 aaKnown RBP5.31□□□□□ -1.56
SMG6-217ENST00000575338 NUDT11Q96G61 164 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 PACRGQ96M98 296 aaPredicted RBP5.31□□□□□ -1.56
SMG6-217ENST00000575338 IGSF10Q6WRI0 2623 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 DOPEY1Q5JWR5 2465 aa5.31□□□□□ -1.56
SMG6-217ENST00000575338 SMG1Q96Q15 3661 aaKnown RBP5.3□□□□□ -1.56
SMG6-217ENST00000575338 TRAV34A0A0B4J273 112 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 RBAKDNA6NC62 111 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 C19orf71A6NCJ1 209 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 NDUFA4O00483 81 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 BUB3O43684 328 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 IGHV4-38-2P0DP08 117 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 FABP4P15090 132 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 ADMP35318 185 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms