RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 TIMM23O14925 209 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 PPIFP30405 207 aaKnown RBP6.86□□□□□ -1.31
RPAIN-215ENST00000575112 VAMP3Q15836 100 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 NUP35Q8NFH5 326 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 H0YJW9 148 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 M0R3E3 92 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 DLL1O00548 723 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 IL4P05112 153 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 HTR1DP28221 377 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 PRR20EP86478 221 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 PRR20CP86479 221 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 PRR20DP86480 221 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 PRR20BP86481 221 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 PRR20AP86496 221 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 LY6EQ16553 131 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 LINC00312Q9Y6C7 94 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 THBDP07204 575 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 NBEAP1P0C6P0 100 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 CSN1S1P47710 185 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 CD69Q07108 199 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 AARDQ4LEZ3 155 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 TMEM177Q53S58 311 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 OR4C5Q8NGB2 326 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 FN1P02751 2386 aaKnown RBP6.85□□□□□ -1.31
RPAIN-215ENST00000575112 A0A087X0K7 114 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 A0A1W2PPI3 338 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 MPDU1O75352 247 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 RNASE2P10153 161 aaKnown RBP6.85□□□□□ -1.31
RPAIN-215ENST00000575112 PRCDQ00LT1 54 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 OR8B3Q8NGG8 313 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 C11orf52Q96A22 123 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 IGF2BP2-AS1Q96M15 143 aa6.85□□□□□ -1.31
RPAIN-215ENST00000575112 IGLV3-9A0A075B6K5 115 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 IGLC7A0M8Q6 106 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 K7EQM0 130 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 NUDT3O95989 172 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 HTN1P15515 57 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 CIARTQ8N365 385 aaPredicted RBP6.84□□□□□ -1.31
RPAIN-215ENST00000575112 IGHV2-26A0A0B4J1V2 119 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 HIGD1CA8MV81 97 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 C9JCJ5 164 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 SCGB2A1O75556 95 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 AMMECR1LQ6DCA0 310 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 VSTM2AQ8TAG5 236 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 WFDC12Q8WWY7 111 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 RAI1Q7Z5J4 1906 aaPredicted RBP6.84□□□□□ -1.31
RPAIN-215ENST00000575112 SMIM27A0A1W2PRY6 76 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 F2RL2O00254 374 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 SAP30O75446 220 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 P01737 135 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 APOBEC3AP31941 199 aaPredicted RBP6.84□□□□□ -1.31
RPAIN-215ENST00000575112 ZNF672Q499Z4 452 aaPredicted RBP6.84□□□□□ -1.31
RPAIN-215ENST00000575112 OR10J3Q5JRS4 329 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 SLC25A48Q6ZT89 311 aaKnown RBP6.84□□□□□ -1.31
RPAIN-215ENST00000575112 TMEM219Q86XT9 240 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 ZNF738Q8NE65 137 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 NUDT10Q8NFP7 164 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 PRSS3P2Q8NHM4 247 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 ORAOV1Q8WV07 137 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 MBD6Q96DN6 1003 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 NUDT11Q96G61 164 aa6.84□□□□□ -1.31
RPAIN-215ENST00000575112 DOPEY1Q5JWR5 2465 aa6.84□□□□□ -1.32
RPAIN-215ENST00000575112 IGHV1-8P0DP01 117 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 FAM120AOSQ5T036 256 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 SSX8Q7RTT4 187 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 TEX45Q8NA69 505 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 SRSF12Q8WXF0 261 aaKnown RBP6.83□□□□□ -1.32
RPAIN-215ENST00000575112 C17orf77Q96MU5 243 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 TAX1BP3O14907 124 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 TCTEX1D1Q8N7M0 179 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 TMEM116Q8NCL8 245 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 TMEM133Q9H2Q1 129 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 IGHV2-70DA0A0C4DH43 119 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 TOMM40O96008 361 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 LOXP28300 417 aaPredicted RBP6.83□□□□□ -1.32
RPAIN-215ENST00000575112 CDSNQ15517 529 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 TMEM249Q2WGJ8 235 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 TMEM14BQ9NUH8 114 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 BET1LQ9NYM9 111 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 CRYBG3Q68DQ2 2970 aa6.83□□□□□ -1.32
RPAIN-215ENST00000575112 FLNCQ14315 2725 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 OR4C46A6NHA9 309 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 ORM1P02763 201 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 RIPPLY3P57055 190 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 TMPRSS3P57727 454 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 PPP1R27Q86WC6 154 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 MAPK1IP1LQ8NDC0 245 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 SLC25A2Q9BXI2 301 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 RAB1BQ9H0U4 201 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 TRAV9-2A0A087WT02 112 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 TRAV8-6A0A0B4J262 113 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 A1L4Q6 167 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 SPRY2O43597 315 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 OR5AL1P0C617 328 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 FA2HQ7L5A8 372 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 OSR1Q8TAX0 266 aaPredicted RBP6.82□□□□□ -1.32
RPAIN-215ENST00000575112 FAM167A-AS1Q96KT0 104 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 HIGD1AQ9Y241 93 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 UFC1Q9Y3C8 167 aa6.82□□□□□ -1.32
RPAIN-215ENST00000575112 PEX7O00628 323 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms