RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 PSG3Q16557 428 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 TIMM23BQ5SRD1 257 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 Q6ZT83 130 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 THAP8Q8NA92 274 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 ZNF785A8K8V0 405 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 K7EMI3 77 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 SMIM13P0DJ93 91 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 BMI1P35226 326 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 RIGQ13278 110 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 LGALS9BQ3B8N2 356 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 LGALS9CQ6DKI2 356 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 HCP5Q6MZN7 132 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 SLC25A48Q6ZT89 311 aaKnown RBP11.51□□□□□ -0.57
SMG6-215ENST00000574501 FAM222BQ8WU58 562 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 C18orf15Q96N68 181 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 KLRC4-KLRK1H3BQV0 150 aa11.5□□□□□ -0.57
SMG6-215ENST00000574501 FXYD2P54710 66 aa11.5□□□□□ -0.57
SMG6-215ENST00000574501 DHRS13Q6UX07 377 aa11.5□□□□□ -0.57
SMG6-215ENST00000574501 ZCCHC24Q8N2G6 241 aaKnown RBP11.5□□□□□ -0.57
SMG6-215ENST00000574501 TTTY13Q9BZ97 58 aa11.5□□□□□ -0.57
SMG6-215ENST00000574501 PRSS47A8MTI9 375 aa11.5□□□□□ -0.57
SMG6-215ENST00000574501 SIVA1O15304 175 aa11.5□□□□□ -0.57
SMG6-215ENST00000574501 IGLV2-11P01706 119 aa11.5□□□□□ -0.57
SMG6-215ENST00000574501 MBNL2Q5VZF2 373 aaKnown RBP11.5□□□□□ -0.57
SMG6-215ENST00000574501 ZNF414Q96IQ9 312 aa11.5□□□□□ -0.57
SMG6-215ENST00000574501 COL25A1Q9BXS0 654 aaPredicted RBP11.5□□□□□ -0.57
SMG6-215ENST00000574501 DKK2Q9UBU2 259 aa11.5□□□□□ -0.57
SMG6-215ENST00000574501 MZT1Q08AG7 82 aa11.49□□□□□ -0.57
SMG6-215ENST00000574501 CCL13Q99616 98 aa11.49□□□□□ -0.57
SMG6-215ENST00000574501 IGHV1-18A0A0C4DH31 117 aa11.49□□□□□ -0.57
SMG6-215ENST00000574501 GAGE12HA6NDE8 117 aa11.49□□□□□ -0.57
SMG6-215ENST00000574501 SUB1P53999 127 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMG6-215ENST00000574501 ZNF788Q6ZQV5 615 aa11.49□□□□□ -0.57
SMG6-215ENST00000574501 BCL6BQ8N143 479 aaPredicted RBP11.49□□□□□ -0.57
SMG6-215ENST00000574501 FAM216BQ8N7L0 139 aa11.49□□□□□ -0.57
SMG6-215ENST00000574501 OSR1Q8TAX0 266 aaPredicted RBP11.49□□□□□ -0.57
SMG6-215ENST00000574501 RAB9BQ9NP90 201 aa11.49□□□□□ -0.57
SMG6-215ENST00000574501 DIAPH2-AS1Q14236 149 aa11.48□□□□□ -0.57
SMG6-215ENST00000574501 C16orf54Q6UWD8 224 aa11.48□□□□□ -0.57
SMG6-215ENST00000574501 RPUSD1Q9UJJ7 312 aaKnown RBP11.48□□□□□ -0.57
SMG6-215ENST00000574501 TECTAO75443 2155 aa11.48□□□□□ -0.57
SMG6-215ENST00000574501 M0R296 226 aa11.48□□□□□ -0.57
SMG6-215ENST00000574501 NDUFS8O00217 210 aa11.48□□□□□ -0.57
SMG6-215ENST00000574501 WFDC2Q14508 124 aa11.48□□□□□ -0.57
SMG6-215ENST00000574501 AMN1Q8IY45 258 aa11.48□□□□□ -0.57
SMG6-215ENST00000574501 TPSG1Q9NRR2 321 aa11.48□□□□□ -0.57
SMG6-215ENST00000574501 TMSB15BA0A087X1C1 80 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 A0A1B0GV72 72 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 TMEM213A2RRL7 107 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 LHBP01229 141 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 CD300EQ496F6 205 aaPredicted RBP11.47□□□□□ -0.57
SMG6-215ENST00000574501 PMS2CLQ68D20 193 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 PRELID3AQ96N28 172 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 ATP6V0BQ99437 205 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 VGLL1Q99990 258 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 SMPXQ9UHP9 88 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 BOD1L1Q8NFC6 3051 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 A0A1W2PPI3 338 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 TMEM189A5PLL7 270 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 FTH1P19P0C7X4 201 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 SCGB1A1P11684 91 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 IFI27L1Q96BM0 104 aa11.47□□□□□ -0.57
SMG6-215ENST00000574501 DMXL2Q8TDJ6 3036 aa11.46□□□□□ -0.57
SMG6-215ENST00000574501 IGKV2D-26A0A0A0MRZ7 120 aa11.46□□□□□ -0.57
SMG6-215ENST00000574501 SPAARA0A1B0GVQ0 90 aa11.46□□□□□ -0.57
SMG6-215ENST00000574501 SMKR1H3BMG3 65 aa11.46□□□□□ -0.57
SMG6-215ENST00000574501 CEACAM3P40198 252 aa11.46□□□□□ -0.57
SMG6-215ENST00000574501 CCDC144NLQ6NUI1 221 aa11.46□□□□□ -0.57
SMG6-215ENST00000574501 MDS2Q8NDY4 140 aa11.46□□□□□ -0.57
SMG6-215ENST00000574501 SIT1Q9Y3P8 196 aa11.46□□□□□ -0.57
SMG6-215ENST00000574501 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.46□□□□□ -0.58
SMG6-215ENST00000574501 HBDP02042 147 aa11.46□□□□□ -0.58
SMG6-215ENST00000574501 CRIP1P50238 77 aa11.46□□□□□ -0.58
SMG6-215ENST00000574501 ZNF833PQ6ZTB9 187 aa11.46□□□□□ -0.58
SMG6-215ENST00000574501 SH2D6Q7Z4S9 175 aa11.46□□□□□ -0.58
SMG6-215ENST00000574501 WFDC12Q8WWY7 111 aa11.46□□□□□ -0.58
SMG6-215ENST00000574501 GAFA1Q96PS6 74 aa11.46□□□□□ -0.58
SMG6-215ENST00000574501 OTORQ9NRC9 128 aa11.46□□□□□ -0.58
SMG6-215ENST00000574501 NHP2Q9NX24 153 aaKnown RBP11.46□□□□□ -0.58
SMG6-215ENST00000574501 RAI1Q7Z5J4 1906 aaPredicted RBP11.45□□□□□ -0.58
SMG6-215ENST00000574501 TNFRSF1AP19438 455 aa11.45□□□□□ -0.58
SMG6-215ENST00000574501 RAB9AP51151 201 aa11.45□□□□□ -0.58
SMG6-215ENST00000574501 LYZP61626 148 aa11.45□□□□□ -0.58
SMG6-215ENST00000574501 MTURNQ8N3F0 131 aa11.45□□□□□ -0.58
SMG6-215ENST00000574501 C8orf46Q8TAG6 207 aa11.45□□□□□ -0.58
SMG6-215ENST00000574501 RITA1Q96K30 269 aa11.45□□□□□ -0.58
SMG6-215ENST00000574501 C17orf77Q96MU5 243 aa11.45□□□□□ -0.58
SMG6-215ENST00000574501 INTS1Q8N201 2190 aaKnown RBP11.45□□□□□ -0.58
SMG6-215ENST00000574501 INS-IGF2F8WCM5 200 aa11.45□□□□□ -0.58
SMG6-215ENST00000574501 SLC25A17O43808 307 aa11.45□□□□□ -0.58
SMG6-215ENST00000574501 NDUFS7O75251 213 aa11.45□□□□□ -0.58
SMG6-215ENST00000574501 KIR2DL2P43627 348 aaPredicted RBP11.45□□□□□ -0.58
SMG6-215ENST00000574501 TMEM167AQ8TBQ9 72 aa11.45□□□□□ -0.58
SMG6-215ENST00000574501 ZZEF1O43149 2961 aa11.44□□□□□ -0.58
SMG6-215ENST00000574501 LYZL1Q6UWQ5 148 aa11.44□□□□□ -0.58
SMG6-215ENST00000574501 ZNF318Q5VUA4 2279 aa11.44□□□□□ -0.58
SMG6-215ENST00000574501 IGLV1-44P01699 117 aa11.44□□□□□ -0.58
SMG6-215ENST00000574501 CCL3L1P16619 93 aa11.44□□□□□ -0.58
SMG6-215ENST00000574501 ORMDL3Q8N138 153 aa11.44□□□□□ -0.58
SMG6-215ENST00000574501 GATD1Q8NB37 220 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms