RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 FBXL15Q9H469 300 aa15.14■□□□□ 0.01
SCARF1-206ENST00000573852 DYNLRB1Q9NP97 96 aa15.14■□□□□ 0.01
SCARF1-206ENST00000573852 ANKRD11Q6UB99 2663 aaPredicted RBP15.14■□□□□ 0.01
SCARF1-206ENST00000573852 HAX1O00165 279 aa15.13■□□□□ 0.01
SCARF1-206ENST00000573852 ZNF738Q8NE65 137 aa15.13■□□□□ 0.01
SCARF1-206ENST00000573852 ASCL2Q99929 193 aa15.13■□□□□ 0.01
SCARF1-206ENST00000573852 TMEM14CQ9P0S9 112 aa15.13■□□□□ 0.01
SCARF1-206ENST00000573852 C16orf54Q6UWD8 224 aa15.13■□□□□ 0.01
SCARF1-206ENST00000573852 MCRIP2Q9BUT9 160 aaKnown RBP15.13■□□□□ 0.01
SCARF1-206ENST00000573852 ST20Q9HBF5 79 aa15.13■□□□□ 0.01
SCARF1-206ENST00000573852 E7EQL1 145 aa15.12■□□□□ 0.01
SCARF1-206ENST00000573852 I3L2K1 104 aa15.12■□□□□ 0.01
SCARF1-206ENST00000573852 PRRG2O14669 202 aa15.12■□□□□ 0.01
SCARF1-206ENST00000573852 HOXB4P17483 251 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-206ENST00000573852 C17orf77Q96MU5 243 aa15.12■□□□□ 0.01
SCARF1-206ENST00000573852 RBP4P02753 201 aa15.12■□□□□ 0.01
SCARF1-206ENST00000573852 UBE2V1Q13404 147 aa15.12■□□□□ 0.01
SCARF1-206ENST00000573852 BUB1B-PAK6H3BSN5 160 aa15.11■□□□□ 0.01
SCARF1-206ENST00000573852 ARL6IP6Q8N6S5 226 aa15.11■□□□□ 0.01
SCARF1-206ENST00000573852 SRSF12Q8WXF0 261 aaKnown RBP15.11■□□□□ 0.01
SCARF1-206ENST00000573852 ZC2HC1AQ96GY0 325 aa15.11■□□□□ 0.01
SCARF1-206ENST00000573852 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.11■□□□□ 0.01
SCARF1-206ENST00000573852 SHISA9B4DS77 424 aa15.11■□□□□ 0.01
SCARF1-206ENST00000573852 IGKV1-17P01599 117 aa15.11■□□□□ 0.01
SCARF1-206ENST00000573852 TNFRSF14Q92956 283 aa15.11■□□□□ 0.01
SCARF1-206ENST00000573852 TMUB1Q9BVT8 246 aa15.11■□□□□ 0.01
SCARF1-206ENST00000573852 MPV17L2Q567V2 206 aa15.1■□□□□ 0.01
SCARF1-206ENST00000573852 RASL11BQ9BPW5 248 aa15.1■□□□□ 0.01
SCARF1-206ENST00000573852 JKAMPQ9P055 326 aa15.1■□□□□ 0.01
SCARF1-206ENST00000573852 VSTM5A8MXK1 200 aa15.1■□□□□ 0.01
SCARF1-206ENST00000573852 LIPFP07098 398 aa15.1■□□□□ 0.01
SCARF1-206ENST00000573852 CSN3P07498 182 aa15.1■□□□□ 0.01
SCARF1-206ENST00000573852 RBPJQ06330 500 aa15.1■□□□□ 0.01
SCARF1-206ENST00000573852 LYNX1G3V0Z9 82 aa15.1■□□□□ 0.01
SCARF1-206ENST00000573852 ARMS2P0C7Q2 107 aa15.1■□□□□ 0.01
SCARF1-206ENST00000573852 LYNX1P0DP58 116 aa15.1■□□□□ 0.01
SCARF1-206ENST00000573852 RBX1P62877 108 aa15.1■□□□□ 0.01
SCARF1-206ENST00000573852 RALYQ9UKM9 306 aaKnown RBP15.1■□□□□ 0.01
SCARF1-206ENST00000573852 PIEZO2Q9H5I5 2752 aa15.09■□□□□ 0.01
SCARF1-206ENST00000573852 KLK10O43240 276 aa15.09■□□□□ 0.01
SCARF1-206ENST00000573852 OR5AL1P0C617 328 aa15.09■□□□□ 0.01
SCARF1-206ENST00000573852 COX7A1P24310 79 aa15.09■□□□□ 0.01
SCARF1-206ENST00000573852 TMEM191AQ9H0A3 160 aa15.09■□□□□ 0.01
SCARF1-206ENST00000573852 GVINP1Q7Z2Y8 2422 aa15.09■□□□□ 0.01
SCARF1-206ENST00000573852 HTR1DP28221 377 aa15.09■□□□□ 0.01
SCARF1-206ENST00000573852 MAP1LC3CQ9BXW4 147 aa15.09■□□□□ 0.01
SCARF1-206ENST00000573852 NGBQ9NPG2 151 aa15.09■□□□□ 0.01
SCARF1-206ENST00000573852 TRBV19A0A075B6N1 114 aa15.08■□□□□ 0
SCARF1-206ENST00000573852 A0A1B0GUT8 65 aa15.08■□□□□ 0
SCARF1-206ENST00000573852 H0Y8G0 127 aa15.08■□□□□ 0
SCARF1-206ENST00000573852 NEU4Q8WWR8 484 aaPredicted RBP15.08■□□□□ 0
SCARF1-206ENST00000573852 POLEQ07864 2286 aa15.08■□□□□ 0
SCARF1-206ENST00000573852 APC2O95996 2303 aa15.08■□□□□ 0
SCARF1-206ENST00000573852 TIMM8BQ9Y5J9 83 aaPredicted RBP15.08■□□□□ 0
SCARF1-206ENST00000573852 ZNF292O60281 2723 aa15.08■□□□□ 0
SCARF1-206ENST00000573852 TPRP12270 2363 aaKnown RBP15.07■□□□□ 0
SCARF1-206ENST00000573852 TRBV6-1A0A0K0K1D8 114 aa15.07■□□□□ 0
SCARF1-206ENST00000573852 ACACAQ13085 2346 aa15.07■□□□□ 0
SCARF1-206ENST00000573852 PET117Q6UWS5 81 aa15.07■□□□□ 0
SCARF1-206ENST00000573852 SHANK2-AS3Q9BTD1 123 aa15.07■□□□□ 0
SCARF1-206ENST00000573852 PLGLAQ15195 96 aa15.07■□□□□ 0
SCARF1-206ENST00000573852 SLC25A34Q6PIV7 304 aa15.07■□□□□ 0
SCARF1-206ENST00000573852 PMCHL2Q9BQD1 86 aa15.07■□□□□ 0
SCARF1-206ENST00000573852 LOC105371242A0A075B767 164 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 K7EIM0 57 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 NUDT3O95989 172 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 CRIP1P50238 77 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 FBLN7Q53RD9 439 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 SIGLEC15Q6ZMC9 328 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 ERASQ7Z444 233 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 RPEQ96AT9 228 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 SCNM1Q9BWG6 230 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 BPIFA4PQ86YQ2 179 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 TMEM75Q8N9X5 138 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 SCRT2Q9NQ03 307 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 PSG8Q9UQ74 426 aa15.06■□□□□ 0
SCARF1-206ENST00000573852 H3BRN7 92 aa15.05■□□□□ 0
SCARF1-206ENST00000573852 HSPB8Q9UJY1 196 aa15.05■□□□□ 0
SCARF1-206ENST00000573852 IGHV2-70DA0A0C4DH43 119 aa15.05■□□□□ -0
SCARF1-206ENST00000573852 HSBP1L1C9JCN9 74 aa15.05■□□□□ -0
SCARF1-206ENST00000573852 GFRALQ6UXV0 394 aa15.05■□□□□ -0
SCARF1-206ENST00000573852 CNIH1O95406 144 aa15.04■□□□□ -0
SCARF1-206ENST00000573852 RIGQ13278 110 aa15.04■□□□□ -0
SCARF1-206ENST00000573852 LDLRAD2Q5SZI1 272 aa15.04■□□□□ -0
SCARF1-206ENST00000573852 BVES-AS1Q5T3Y7 98 aa15.04■□□□□ -0
SCARF1-206ENST00000573852 ABHD17AQ96GS6 310 aa15.04■□□□□ -0
SCARF1-206ENST00000573852 HLA-DRB1P01911 266 aa15.04■□□□□ -0
SCARF1-206ENST00000573852 ZNF491Q8N8L2 437 aa15.04■□□□□ -0
SCARF1-206ENST00000573852 PPIAL4CA0A0B4J2A2 164 aa15.03■□□□□ -0
SCARF1-206ENST00000573852 M0R3E3 92 aa15.03■□□□□ -0
SCARF1-206ENST00000573852 PPIAL4GP0DN37 164 aa15.03■□□□□ -0
SCARF1-206ENST00000573852 PSG3Q16557 428 aa15.03■□□□□ -0
SCARF1-206ENST00000573852 BCL6BQ8N143 479 aaPredicted RBP15.03■□□□□ -0
SCARF1-206ENST00000573852 LY6LH3BQJ8 138 aa15.03■□□□□ -0
SCARF1-206ENST00000573852 TAX1BP3O14907 124 aa15.03■□□□□ -0
SCARF1-206ENST00000573852 LINC01545Q5VT33 79 aa15.03■□□□□ -0
SCARF1-206ENST00000573852 Q8NA96 180 aa15.03■□□□□ -0
SCARF1-206ENST00000573852 GATD1Q8NB37 220 aa15.03■□□□□ -0
SCARF1-206ENST00000573852 TPPP3Q9BW30 176 aa15.03■□□□□ -0
SCARF1-206ENST00000573852 AP5S1Q9NUS5 200 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms