RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 DEDDO75618 318 aa6.32□□□□□ -1.4
SMG6-210ENST00000572205 BMI1P35226 326 aa6.32□□□□□ -1.4
SMG6-210ENST00000572205 AKR1C1Q04828 323 aa6.32□□□□□ -1.4
SMG6-210ENST00000572205 C1orf194Q5T5A4 169 aa6.32□□□□□ -1.4
SMG6-210ENST00000572205 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.32□□□□□ -1.4
SMG6-210ENST00000572205 ZNF709Q8N972 641 aa6.32□□□□□ -1.4
SMG6-210ENST00000572205 SHANK2-AS3Q9BTD1 123 aa6.32□□□□□ -1.4
SMG6-210ENST00000572205 PBDC1Q9BVG4 233 aa6.32□□□□□ -1.4
SMG6-210ENST00000572205 OR5AC2Q9NZP5 309 aa6.32□□□□□ -1.4
SMG6-210ENST00000572205 GSKIPQ9P0R6 139 aa6.32□□□□□ -1.4
SMG6-210ENST00000572205 WDR83OSQ9Y284 106 aa6.32□□□□□ -1.4
SMG6-210ENST00000572205 LSM5Q9Y4Y9 91 aaKnown RBP6.32□□□□□ -1.4
SMG6-210ENST00000572205 HELTA6NFD8 242 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 UBE2CO00762 179 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 GOSR2O14653 212 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 PRAF2O60831 178 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 HLA-DRB4P13762 266 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 APOC4P55056 127 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 RPP30P78346 268 aaKnown RBP6.31□□□□□ -1.4
SMG6-210ENST00000572205 PSMG4Q5JS54 123 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 TMEM252Q8N6L7 170 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 Q8NAQ8 132 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 TMEM37Q8WXS4 190 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 UHRF2Q96PU4 802 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 GGACTQ9BVM4 153 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 SLC25A39Q9BZJ4 359 aaPredicted RBP6.31□□□□□ -1.4
SMG6-210ENST00000572205 NMES1Q9C002 83 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 PAIP2BQ9ULR5 123 aaKnown RBP6.31□□□□□ -1.4
SMG6-210ENST00000572205 HLA-DRB4X5D2U9 266 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 HECTD4Q9Y4D8 3996 aa6.31□□□□□ -1.4
SMG6-210ENST00000572205 A0A087X0K7 114 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 C5orf51A6NDU8 294 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 ZNF705EA8MWA4 302 aaPredicted RBP6.3□□□□□ -1.4
SMG6-210ENST00000572205 FAM25EA8MYX2 175 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 H3BMM0 161 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 AGPAT2O15120 278 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 SPRY2O43597 315 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 CST7O76096 145 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 GYPEP15421 78 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 CXCL3P19876 107 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 NUP62P37198 522 aaPredicted RBP6.3□□□□□ -1.4
SMG6-210ENST00000572205 PSMB3P49720 205 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 SULT1A1P50225 295 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 OPCMLQ14982 345 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 AMTNQ6UX39 209 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 BPIFCQ8NFQ6 507 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 OR10P1Q8NGE3 313 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 RNF126Q9BV68 326 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 CSTL1Q9H114 145 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 C11orf68Q9H3H3 251 aaKnown RBP6.3□□□□□ -1.4
SMG6-210ENST00000572205 NPVFQ9HCQ7 196 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 DOK5Q9P104 306 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 FAT2Q9NYQ8 4349 aa6.3□□□□□ -1.4
SMG6-210ENST00000572205 A0A0J9YWU9 116 aa6.29□□□□□ -1.4
SMG6-210ENST00000572205 F6UB75 175 aa6.29□□□□□ -1.4
SMG6-210ENST00000572205 G3V3Q6 166 aa6.29□□□□□ -1.4
SMG6-210ENST00000572205 DNASE2O00115 360 aaPredicted RBP6.29□□□□□ -1.4
SMG6-210ENST00000572205 PTTG1O95997 202 aa6.29□□□□□ -1.4
SMG6-210ENST00000572205 CFDP00746 253 aaPredicted RBP6.29□□□□□ -1.4
SMG6-210ENST00000572205 CA1P00915 261 aaPredicted RBP6.29□□□□□ -1.4
SMG6-210ENST00000572205 LYL1P12980 280 aa6.29□□□□□ -1.4
SMG6-210ENST00000572205 S100A10P60903 97 aa6.29□□□□□ -1.4
SMG6-210ENST00000572205 SELENOTP62341 195 aa6.29□□□□□ -1.4
SMG6-210ENST00000572205 PAFAH1B2P68402 229 aa6.29□□□□□ -1.4
SMG6-210ENST00000572205 ACTL10Q5JWF8 245 aa6.29□□□□□ -1.4
SMG6-210ENST00000572205 ZFAND6Q6FIF0 208 aa6.29□□□□□ -1.4
SMG6-210ENST00000572205 IL17DQ8TAD2 202 aa6.29□□□□□ -1.4
SMG6-210ENST00000572205 SAV1Q9H4B6 383 aaPredicted RBP6.29□□□□□ -1.4
SMG6-210ENST00000572205 ALG5Q9Y673 324 aa6.29□□□□□ -1.4
SMG6-210ENST00000572205 UBE2L5PA0A1B0GUS4 154 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 SMCO3A2RU48 225 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 SLC17A3O00476 420 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 ISLRO14498 428 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 FABP1P07148 127 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 IGLC2P0DOY2 106 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 SPP1P10451 314 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 ORM2P19652 201 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 HLA-DMBP28068 263 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 CAV2P51636 162 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 AP2S1P53680 142 aaPredicted RBP6.28□□□□□ -1.4
SMG6-210ENST00000572205 CMC4P56277 68 aaPredicted RBP6.28□□□□□ -1.4
SMG6-210ENST00000572205 NHLH2Q02577 135 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 ZNF546Q86UE3 836 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 TMEM217Q8N7C4 229 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 OR11H7Q8NGC8 314 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 OR1B1Q8NGR6 318 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 GATAD1Q8WUU5 269 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 PPP1R1CQ8WVI7 109 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 NARS2Q96I59 477 aaKnown RBP6.28□□□□□ -1.4
SMG6-210ENST00000572205 ARV1Q9H2C2 271 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 GPN1Q9HCN4 374 aaPredicted RBP6.28□□□□□ -1.4
SMG6-210ENST00000572205 FBXL17Q9UF56 701 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 DNAH17Q9UFH2 4485 aa6.28□□□□□ -1.4
SMG6-210ENST00000572205 A0A0J9YX75 114 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 HYPMO75409 117 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 MPC2O95563 127 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 RBMY1A1P0DJD3 496 aaKnown RBP6.27□□□□□ -1.41
SMG6-210ENST00000572205 RBMY1CP0DJD4 496 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 BTF3P20290 206 aaKnown RBP6.27□□□□□ -1.41
SMG6-210ENST00000572205 DEFA1P59665 94 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms