RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 LYRM2Q9NU23 88 aaPredicted RBP7.45□□□□□ -1.22
GTF3C1-213ENST00000571886 OR5AC2Q9NZP5 309 aa7.45□□□□□ -1.22
GTF3C1-213ENST00000571886 FBXL17Q9UF56 701 aa7.45□□□□□ -1.22
GTF3C1-213ENST00000571886 PFDN2Q9UHV9 154 aa7.45□□□□□ -1.22
GTF3C1-213ENST00000571886 HIGD1AQ9Y241 93 aa7.45□□□□□ -1.22
GTF3C1-213ENST00000571886 TRAV8-2A0A0B4J237 113 aa7.44□□□□□ -1.22
GTF3C1-213ENST00000571886 MRPS12O15235 138 aaKnown RBP7.44□□□□□ -1.22
GTF3C1-213ENST00000571886 PRAF2O60831 178 aa7.44□□□□□ -1.22
GTF3C1-213ENST00000571886 IGKV3-20P01619 116 aa7.44□□□□□ -1.22
GTF3C1-213ENST00000571886 HLA-DMBP28068 263 aa7.44□□□□□ -1.22
GTF3C1-213ENST00000571886 H2BFSP57053 126 aa7.44□□□□□ -1.22
GTF3C1-213ENST00000571886 SNRPD3P62318 126 aaKnown RBP7.44□□□□□ -1.22
GTF3C1-213ENST00000571886 NHLH2Q02577 135 aa7.44□□□□□ -1.22
GTF3C1-213ENST00000571886 LRRC37A5PQ49AS3 106 aa7.44□□□□□ -1.22
GTF3C1-213ENST00000571886 GATAD1Q8WUU5 269 aa7.44□□□□□ -1.22
GTF3C1-213ENST00000571886 TMEM37Q8WXS4 190 aa7.44□□□□□ -1.22
GTF3C1-213ENST00000571886 SNRPCP09234 159 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 RBMY1A1P0DJD3 496 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 RBMY1CP0DJD4 496 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 SPP1P10451 314 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 HLA-DRB4P13762 266 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 PVALBP20472 110 aaPredicted RBP7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 ID1P41134 155 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 GALR1P47211 349 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 PSMB3P49720 205 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 SULT1A1P50225 295 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 RAP2BP61225 183 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 SELENOTP62341 195 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 PMS2P11Q13670 270 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 RBMY1FQ15415 496 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 VWC2Q2TAL6 325 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 MIC13Q5XKP0 118 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 MORN3Q6PF18 240 aaPredicted RBP7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 RNF126Q9BV68 326 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 NMES1Q9C002 83 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 ARV1Q9H2C2 271 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 SAV1Q9H4B6 383 aaPredicted RBP7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 XCL2Q9UBD3 114 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 WDR83OSQ9Y284 106 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 HLA-DRB4X5D2U9 266 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 X6R8D5 127 aa7.43□□□□□ -1.22
GTF3C1-213ENST00000571886 TRAV5A0A0B4J249 113 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 UBE2L5PA0A1B0GUS4 154 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 ISLRO14498 428 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 ZNF705DP0CH99 300 aaPredicted RBP7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 ZNF705BP0CI00 300 aaPredicted RBP7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 CAMLGP49069 296 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 PRR20EP86478 221 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 PRR20CP86479 221 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 PRR20DP86480 221 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 PRR20BP86481 221 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 PRR20AP86496 221 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 FGL1Q08830 312 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 ZNF546Q86UE3 836 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 RNF182Q8N6D2 247 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 Q8NAQ8 132 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 C16orf92Q96LL3 132 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 SLC35B3Q9H1N7 401 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 UQCC1Q9NVA1 299 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 SACSQ9NZJ4 4579 aa7.42□□□□□ -1.22
GTF3C1-213ENST00000571886 A0A0J9YX75 114 aa7.41□□□□□ -1.22
GTF3C1-213ENST00000571886 ZNF705EA8MWA4 302 aaPredicted RBP7.41□□□□□ -1.22
GTF3C1-213ENST00000571886 S100A11P31949 105 aa7.41□□□□□ -1.22
GTF3C1-213ENST00000571886 CD300CQ08708 224 aa7.41□□□□□ -1.22
GTF3C1-213ENST00000571886 FAM78BQ5VT40 261 aa7.41□□□□□ -1.22
GTF3C1-213ENST00000571886 FOXI2Q6ZQN5 318 aa7.41□□□□□ -1.22
GTF3C1-213ENST00000571886 LINC00305Q7Z4B0 112 aa7.41□□□□□ -1.22
GTF3C1-213ENST00000571886 ZNF709Q8N972 641 aa7.41□□□□□ -1.22
GTF3C1-213ENST00000571886 OR4B1Q8NGF8 309 aa7.41□□□□□ -1.22
GTF3C1-213ENST00000571886 PPP1R1CQ8WVI7 109 aa7.41□□□□□ -1.22
GTF3C1-213ENST00000571886 ALG5Q9Y673 324 aa7.41□□□□□ -1.22
GTF3C1-213ENST00000571886 ELOA3CA0A087WX78 387 aaPredicted RBP7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 IGHV4-28A0A0C4DH34 117 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 LCE6AA0A183 80 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 E5RGE8 158 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 H3BTX0 84 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 SSNA1O43805 119 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 RPL7P18124 248 aaKnown RBP7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 ATF4P18848 351 aaPredicted RBP7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 CXCL3P19876 107 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 FGF7P21781 194 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 MEOX2P50222 304 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 NANOS2P60321 138 aaKnown RBP7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 BAXQ07812 192 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 OPCMLQ14982 345 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 NDUFA5Q16718 116 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 ST6GAL2Q96JF0 529 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 GPR82Q96P67 336 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 DNAJC4Q9NNZ3 241 aa7.4□□□□□ -1.22
GTF3C1-213ENST00000571886 PLECQ15149 4684 aaKnown RBP7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 A0A087X0K7 114 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 CXorf65A6NEN9 183 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 A8MTW9 85 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 COX7A2P2O60397 106 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 MPC2O95563 127 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 RLN2P04090 185 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 RPL29P47914 159 aaKnown RBP7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 B2MP61769 119 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 HBG1P69891 147 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 HBG2P69892 147 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms