RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 PPIAL4CA0A0B4J2A2 164 aa12.28□□□□□ -0.44
USP43-202ENST00000570475 ITGB1BP1O14713 200 aa12.28□□□□□ -0.44
USP43-202ENST00000570475 PPIAL4GP0DN37 164 aa12.28□□□□□ -0.44
USP43-202ENST00000570475 RBPMS2Q6ZRY4 209 aaKnown RBP12.28□□□□□ -0.44
USP43-202ENST00000570475 FAM57AQ8TBR7 257 aa12.28□□□□□ -0.44
USP43-202ENST00000570475 TMEM133Q9H2Q1 129 aa12.28□□□□□ -0.44
USP43-202ENST00000570475 A0A087X0K7 114 aa12.27□□□□□ -0.44
USP43-202ENST00000570475 LGALS7P47929 136 aa12.27□□□□□ -0.45
USP43-202ENST00000570475 SLC25A34Q6PIV7 304 aa12.27□□□□□ -0.45
USP43-202ENST00000570475 IGKV1D-37A0A075B6S9 117 aa12.27□□□□□ -0.45
USP43-202ENST00000570475 VWC2LB2RUY7 222 aa12.27□□□□□ -0.45
USP43-202ENST00000570475 LOXP28300 417 aaPredicted RBP12.27□□□□□ -0.45
USP43-202ENST00000570475 IGHV3-49A0A0A0MS15 119 aa12.26□□□□□ -0.45
USP43-202ENST00000570475 ARMS2P0C7Q2 107 aa12.26□□□□□ -0.45
USP43-202ENST00000570475 PRSS33Q8NF86 280 aa12.26□□□□□ -0.45
USP43-202ENST00000570475 IGHV3-66A0A0C4DH42 116 aa12.26□□□□□ -0.45
USP43-202ENST00000570475 FNDC10F2Z333 226 aa12.26□□□□□ -0.45
USP43-202ENST00000570475 J3KRW8 73 aa12.26□□□□□ -0.45
USP43-202ENST00000570475 ATP5IP56385 69 aaPredicted RBP12.26□□□□□ -0.45
USP43-202ENST00000570475 GTSF1Q8WW33 167 aa12.26□□□□□ -0.45
USP43-202ENST00000570475 CSN1S1P47710 185 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 TM4SF20Q53R12 229 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 BPIFA4PQ86YQ2 179 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 C18orf15Q96N68 181 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 SLC25A39Q9BZJ4 359 aaPredicted RBP12.25□□□□□ -0.45
USP43-202ENST00000570475 AAMDCQ9H7C9 122 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 AP5S1Q9NUS5 200 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 CHD8Q9HCK8 2581 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 CD3EP07766 207 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 ESDP10768 282 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 RAB37Q96AX2 223 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 SIGLEC9Q9Y336 463 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 IGHV2-26A0A0B4J1V2 119 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 FOXC1Q12948 553 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 Q8N976 141 aa12.25□□□□□ -0.45
USP43-202ENST00000570475 TIMM23O14925 209 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 ORM1P02763 201 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 PPIFP30405 207 aaKnown RBP12.24□□□□□ -0.45
USP43-202ENST00000570475 S100A7P31151 101 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 KLRD1Q13241 179 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 TEX45Q8NA69 505 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 IGHV1-24A0A0C4DH33 117 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 A0A1B0GUT8 65 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 IGLC7A0M8Q6 106 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 SYS1-DBNDD2H3BUS1 97 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 CCL25O15444 150 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 Q6ZS92 163 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 C8orf46Q8TAG6 207 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 MRPL27Q9P0M9 148 aaKnown RBP12.24□□□□□ -0.45
USP43-202ENST00000570475 FAM169BQ8N8A8 192 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 FMC1Q96HJ9 113 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 SCNM1Q9BWG6 230 aa12.24□□□□□ -0.45
USP43-202ENST00000570475 IGHV1-3A0A0C4DH29 117 aa12.23□□□□□ -0.45
USP43-202ENST00000570475 NMUP48645 174 aa12.23□□□□□ -0.45
USP43-202ENST00000570475 RIGQ13278 110 aa12.23□□□□□ -0.45
USP43-202ENST00000570475 F11RQ9Y624 299 aaKnown RBP12.23□□□□□ -0.45
USP43-202ENST00000570475 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.23□□□□□ -0.45
USP43-202ENST00000570475 SMKR1H3BMG3 65 aa12.23□□□□□ -0.45
USP43-202ENST00000570475 FAM162BQ5T6X4 162 aa12.23□□□□□ -0.45
USP43-202ENST00000570475 IGFL2Q6UWQ7 119 aa12.23□□□□□ -0.45
USP43-202ENST00000570475 SPATA12Q7Z6I5 190 aa12.23□□□□□ -0.45
USP43-202ENST00000570475 Q8TAT8 98 aa12.23□□□□□ -0.45
USP43-202ENST00000570475 E7EQL1 145 aa12.23□□□□□ -0.45
USP43-202ENST00000570475 TEX36Q5VZQ5 186 aa12.23□□□□□ -0.45
USP43-202ENST00000570475 SPOCK3Q9BQ16 436 aa12.23□□□□□ -0.45
USP43-202ENST00000570475 NCR2O95944 276 aa12.22□□□□□ -0.45
USP43-202ENST00000570475 TWIST1Q15672 202 aa12.22□□□□□ -0.45
USP43-202ENST00000570475 FBLN7Q53RD9 439 aa12.22□□□□□ -0.45
USP43-202ENST00000570475 ASCL5Q7RTU5 278 aa12.22□□□□□ -0.45
USP43-202ENST00000570475 DOPEY2Q9Y3R5 2298 aa12.22□□□□□ -0.45
USP43-202ENST00000570475 NDUFB8O95169 186 aa12.21□□□□□ -0.45
USP43-202ENST00000570475 IGLV2-23P01705 113 aa12.21□□□□□ -0.45
USP43-202ENST00000570475 LIPFP07098 398 aa12.21□□□□□ -0.45
USP43-202ENST00000570475 HSPB8Q9UJY1 196 aa12.21□□□□□ -0.45
USP43-202ENST00000570475 PSG8Q9UQ74 426 aa12.21□□□□□ -0.45
USP43-202ENST00000570475 IGKV2-40A0A087WW87 121 aaPredicted RBP12.21□□□□□ -0.45
USP43-202ENST00000570475 A0A1B0GWJ7 208 aa12.21□□□□□ -0.45
USP43-202ENST00000570475 IGKV2D-40P01614 121 aaPredicted RBP12.21□□□□□ -0.45
USP43-202ENST00000570475 HLA-DRB1P01911 266 aa12.21□□□□□ -0.45
USP43-202ENST00000570475 TMEM213A2RRL7 107 aa12.21□□□□□ -0.46
USP43-202ENST00000570475 OR2T8A6NH00 312 aa12.21□□□□□ -0.46
USP43-202ENST00000570475 ZNF785A8K8V0 405 aa12.21□□□□□ -0.46
USP43-202ENST00000570475 OR2J3O76001 311 aa12.21□□□□□ -0.46
USP43-202ENST00000570475 CTRLP40313 264 aa12.21□□□□□ -0.46
USP43-202ENST00000570475 C8orf49Q96NF6 230 aa12.21□□□□□ -0.46
USP43-202ENST00000570475 SPTBN4Q9H254 2564 aa12.21□□□□□ -0.46
USP43-202ENST00000570475 CSPG4Q6UVK1 2322 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 TMEM189A5PLL7 270 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 NPIPB5A8MRT5 1133 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 FCN3O75636 299 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 TOMM40O96008 361 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 Q86TA4 180 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 ZNF207O43670 478 aaKnown RBP12.2□□□□□ -0.46
USP43-202ENST00000570475 THBDP07204 575 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 AMMECR1LQ6DCA0 310 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 FAM231DQ6ZW35 169 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 OR4A5Q8NH83 315 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 RNASE8Q8TDE3 154 aaKnown RBP12.2□□□□□ -0.46
USP43-202ENST00000570475 MBD6Q96DN6 1003 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 TRGV9Q99603 122 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms