RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 POLR3KQ9Y2Y1 108 aaPredicted RBP4.55□□□□□ -1.68
CDH13-213ENST00000569454 KLF12Q9Y4X4 402 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 V9GYV3 84 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 TLN2Q9Y4G6 2542 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 IGLV11-55A0A075B6I3 123 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 FAM231BA6NCW3 169 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 PCP4L1A6NKN8 68 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 K7EIM0 57 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 OVOL3O00110 214 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 GATCO43716 136 aaKnown RBP4.54□□□□□ -1.68
CDH13-213ENST00000569454 GNG7O60262 68 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 TOX4O94842 621 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 HLA-DRB1P01911 266 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 SLC25A5P05141 298 aaKnown RBP4.54□□□□□ -1.68
CDH13-213ENST00000569454 PYYP10082 97 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 MGST1P10620 155 aaKnown RBP4.54□□□□□ -1.68
CDH13-213ENST00000569454 PSG1P11464 419 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 FABP4P15090 132 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 MFAP4P55083 255 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 LYZP61626 148 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 RANP62826 216 aaKnown RBP4.54□□□□□ -1.68
CDH13-213ENST00000569454 USF2Q15853 346 aaPredicted RBP4.54□□□□□ -1.68
CDH13-213ENST00000569454 KLK9Q2XQG4 91 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 ATP5L2Q7Z4Y8 100 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 BAGE2Q86Y30 109 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 TTC9CQ8N5M4 171 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 OR4B1Q8NGF8 309 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 OR10D4PQ8NGN7 298 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 CMTM2Q8TAZ6 248 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 WIPF2Q8TF74 440 aaPredicted RBP4.54□□□□□ -1.68
CDH13-213ENST00000569454 GPR82Q96P67 336 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 PIMREGQ9BSJ6 248 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 SHANK2-AS3Q9BTD1 123 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 GPR61Q9BZJ8 451 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 MRPL36Q9P0J6 103 aaKnown RBP4.54□□□□□ -1.68
CDH13-213ENST00000569454 ZNF492Q9P255 531 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 KLK9Q9UKQ9 250 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 HILPDAQ9Y5L2 63 aa4.54□□□□□ -1.68
CDH13-213ENST00000569454 EPPK1P58107 5090 aaKnown RBP4.53□□□□□ -1.68
CDH13-213ENST00000569454 TGP01266 2768 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 TRAV5A0A0B4J249 113 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 SMIM27A0A1W2PRY6 76 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 IZUMO1RA6ND01 250 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 PGPA6NDG6 321 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 IFITM10A6NMD0 228 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 ZNF705GA8MUZ8 300 aaPredicted RBP4.53□□□□□ -1.68
CDH13-213ENST00000569454 H3BRN7 92 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 FCN1O00602 326 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 LY6HO94772 140 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 SCGB1D1O95968 90 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 IGKV1-17P01599 117 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 IGLV2-8P01709 118 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 TCRAP04437 139 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 AMY1AP04745 511 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 RPLP1P05386 114 aaKnown RBP4.53□□□□□ -1.68
CDH13-213ENST00000569454 ESDP10768 282 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 HNF1AP20823 631 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 CDKN1AP38936 164 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 PAFAH1B2P68402 229 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 KLRD1Q13241 179 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 JOSD1Q15040 202 aaPredicted RBP4.53□□□□□ -1.68
CDH13-213ENST00000569454 PYY3Q5JQD4 70 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 SAPCD1Q5SSQ6 148 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 FAM162BQ5T6X4 162 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 MORN5Q5VZ52 161 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 CYB5R2Q6BCY4 276 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 FAM110DQ8TAY7 271 aaPredicted RBP4.53□□□□□ -1.68
CDH13-213ENST00000569454 VN1R17PQ8TDU5 208 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 RNF125Q96EQ8 232 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 GRAMD2BQ96HH9 432 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 SLC25A39Q9BZJ4 359 aaPredicted RBP4.53□□□□□ -1.68
CDH13-213ENST00000569454 GFRA4Q9GZZ7 299 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 MRPL18Q9H0U6 180 aaKnown RBP4.53□□□□□ -1.68
CDH13-213ENST00000569454 Q9H3A6 140 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 ZNF331Q9NQX6 463 aaPredicted RBP4.53□□□□□ -1.68
CDH13-213ENST00000569454 AURKAIP1Q9NWT8 199 aaPredicted RBP4.53□□□□□ -1.68
CDH13-213ENST00000569454 C21orf62Q9NYP8 219 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 MRPL27Q9P0M9 148 aaKnown RBP4.53□□□□□ -1.68
CDH13-213ENST00000569454 NAT8BQ9UHF3 227 aa4.53□□□□□ -1.68
CDH13-213ENST00000569454 COL6A6A6NMZ7 2263 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 AKAP9Q99996 3911 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 WI2-2373I1.2A0A1W2PRP0 233 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 NCBP2LA6PVI3 153 aaKnown RBP4.52□□□□□ -1.69
CDH13-213ENST00000569454 A8MWL6 223 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 SNURFLB1AK76 121 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 TSTD3H0UI37 97 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 H0Y8G0 127 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 BMPR1BO00238 502 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 EREGO14944 169 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 ZNF253O75346 499 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 NDUFB8O95169 186 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 LTAP01374 205 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 AMBPP02760 352 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 CRISP2P16562 243 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 RPL7P18124 248 aaKnown RBP4.52□□□□□ -1.69
CDH13-213ENST00000569454 GNLYP22749 145 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 SAA4P35542 130 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 TPPP2P59282 170 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 LMO4P61968 165 aa4.52□□□□□ -1.69
CDH13-213ENST00000569454 Q0VG73 95 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms