RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 MRPS16Q9Y3D3 137 aaKnown RBP4.02□□□□□ -1.77
CDH13-212ENST00000569144 A0A087WTM6 91 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 CBY3A6NI87 242 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 GSTZ1O43708 216 aaPredicted RBP4.01□□□□□ -1.77
CDH13-212ENST00000569144 NOL3O60936 208 aaKnown RBP4.01□□□□□ -1.77
CDH13-212ENST00000569144 SCGB2A1O75556 95 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 RAB3DO95716 219 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 DNAH10OSP0CZ25 163 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 LPAR6P43657 344 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 TAS2R19P59542 299 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 RND3P61587 244 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 TSPAN5P62079 268 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 PSG9Q00887 426 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 SSBP1Q04837 148 aaKnown RBP4.01□□□□□ -1.77
CDH13-212ENST00000569144 TWIST1Q15672 202 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 ESRGQ1W209 222 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 SPATA31B1PQ5VZV4 182 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 STEAP1BQ6NZ63 245 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 LPCAT3Q6P1A2 487 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 FOXI2Q6ZQN5 318 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 TBC1D26Q86UD7 250 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 OR4C16Q8NGL9 310 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 MCFD2Q8NI22 146 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 TMEM230Q96A57 120 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 ZNF486Q96H40 463 aaPredicted RBP4.01□□□□□ -1.77
CDH13-212ENST00000569144 SEC22AQ96IW7 307 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 UHRF2Q96PU4 802 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 TSC22D3Q99576 134 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 SLC35B3Q9H1N7 401 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 FAM212BQ9NTI7 297 aaPredicted RBP4.01□□□□□ -1.77
CDH13-212ENST00000569144 RABL2AQ9UBK7 228 aaPredicted RBP4.01□□□□□ -1.77
CDH13-212ENST00000569144 RABL2BQ9UNT1 228 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 DNAH8Q96JB1 4490 aa4.01□□□□□ -1.77
CDH13-212ENST00000569144 IGLV5-39A0A0G2JS06 123 aa4□□□□□ -1.77
CDH13-212ENST00000569144 ANKRD20A5PA0PJZ0 165 aa4□□□□□ -1.77
CDH13-212ENST00000569144 ZNF701M0R085 212 aaPredicted RBP4□□□□□ -1.77
CDH13-212ENST00000569144 CLN5O75503 358 aa4□□□□□ -1.77
CDH13-212ENST00000569144 KRASP01116 189 aa4□□□□□ -1.77
CDH13-212ENST00000569144 IGKV1-39P01597 117 aa4□□□□□ -1.77
CDH13-212ENST00000569144 IGKV1D-39P04432 117 aa4□□□□□ -1.77
CDH13-212ENST00000569144 P0C879 139 aa4□□□□□ -1.77
CDH13-212ENST00000569144 PGAM2P15259 253 aa4□□□□□ -1.77
CDH13-212ENST00000569144 S100GP29377 79 aa4□□□□□ -1.77
CDH13-212ENST00000569144 TSPOP30536 169 aa4□□□□□ -1.77
CDH13-212ENST00000569144 TNFSF8P32971 234 aa4□□□□□ -1.77
CDH13-212ENST00000569144 G6PCP35575 357 aa4□□□□□ -1.77
CDH13-212ENST00000569144 PCP4P48539 62 aa4□□□□□ -1.77
CDH13-212ENST00000569144 DEFB1P60022 68 aa4□□□□□ -1.77
CDH13-212ENST00000569144 ERHP84090 104 aaKnown RBP4□□□□□ -1.77
CDH13-212ENST00000569144 PRCDQ00LT1 54 aa4□□□□□ -1.77
CDH13-212ENST00000569144 IL18Q14116 193 aa4□□□□□ -1.77
CDH13-212ENST00000569144 MEF2DQ14814 521 aa4□□□□□ -1.77
CDH13-212ENST00000569144 ZNF79Q15937 498 aa4□□□□□ -1.77
CDH13-212ENST00000569144 PIK3CD-AS1Q5SR53 167 aa4□□□□□ -1.77
CDH13-212ENST00000569144 FAAP20Q6NZ36 180 aa4□□□□□ -1.77
CDH13-212ENST00000569144 NFE4Q86UQ8 179 aa4□□□□□ -1.77
CDH13-212ENST00000569144 OR4B1Q8NGF8 309 aa4□□□□□ -1.77
CDH13-212ENST00000569144 OR13C8Q8NGS7 320 aa4□□□□□ -1.77
CDH13-212ENST00000569144 TERB2Q8NHR7 220 aa4□□□□□ -1.77
CDH13-212ENST00000569144 RXFP4Q8TDU9 374 aa4□□□□□ -1.77
CDH13-212ENST00000569144 GNPNAT1Q96EK6 184 aaPredicted RBP4□□□□□ -1.77
CDH13-212ENST00000569144 TP53RKQ96S44 253 aa4□□□□□ -1.77
CDH13-212ENST00000569144 TMEM208Q9BTX3 173 aa4□□□□□ -1.77
CDH13-212ENST00000569144 RSL24D1Q9UHA3 163 aaKnown RBP4□□□□□ -1.77
CDH13-212ENST00000569144 V9GYH0 126 aa4□□□□□ -1.77
CDH13-212ENST00000569144 LRP2P98164 4655 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 TRAV26-1A0A087WT03 109 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 PLAC8L1A1L4L8 177 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 CCDC160A6NGH7 325 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 CORTO00230 105 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 IGKV1-17P01599 117 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 IGKV1-5P01602 117 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 AKAIN1P0CW23 69 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 UCP1P25874 307 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 PAX9P55771 341 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 PIGPP57054 158 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 SCGB2B2Q4G0G5 96 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 SIGLEC15Q6ZMC9 328 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 CCDC190Q86UF4 302 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 OR4X1Q8NH49 305 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 MARCH1Q8TCQ1 289 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 TRIM63Q969Q1 353 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 RNF125Q96EQ8 232 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 IGF2BP2-AS1Q96M15 143 aa3.99□□□□□ -1.77
CDH13-212ENST00000569144 RTBDNQ9BSG5 229 aaPredicted RBP3.99□□□□□ -1.77
CDH13-212ENST00000569144 MRPL36Q9P0J6 103 aaKnown RBP3.99□□□□□ -1.77
CDH13-212ENST00000569144 TRAV30A0A087WSZ9 112 aa3.98□□□□□ -1.77
CDH13-212ENST00000569144 A0A0J9YX75 114 aa3.98□□□□□ -1.77
CDH13-212ENST00000569144 C3orf85A0A1B0GTC6 90 aa3.98□□□□□ -1.77
CDH13-212ENST00000569144 FABP12A6NFH5 140 aa3.98□□□□□ -1.77
CDH13-212ENST00000569144 A8MTW9 85 aa3.98□□□□□ -1.77
CDH13-212ENST00000569144 ZNF705GA8MUZ8 300 aaPredicted RBP3.98□□□□□ -1.77
CDH13-212ENST00000569144 DISC1C4P0D8 188 aa3.98□□□□□ -1.77
CDH13-212ENST00000569144 H3BNG1 76 aa3.98□□□□□ -1.77
CDH13-212ENST00000569144 SIVA1O15304 175 aa3.98□□□□□ -1.77
CDH13-212ENST00000569144 BUB3O43684 328 aa3.98□□□□□ -1.77
CDH13-212ENST00000569144 TOMM40O96008 361 aa3.98□□□□□ -1.77
CDH13-212ENST00000569144 PRM2P04554 102 aa3.98□□□□□ -1.77
CDH13-212ENST00000569144 M6PRP20645 277 aa3.98□□□□□ -1.77
CDH13-212ENST00000569144 SNCAP37840 140 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms