RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 A0A1W2PPM0 123 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 CD300LBA8K4G0 201 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 EEF1E1-BLOC1S5C9J1V9 151 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 SOCS1O15524 211 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 GPX1P07203 203 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 ZNF286BP0CG31 522 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 HIST1H1CP16403 213 aaKnown RBP3.54□□□□□ -1.84
UBR1-208ENST00000569066 ORM2P19652 201 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 DLX6P56179 175 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 PFN3P60673 137 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 ZNF141Q15928 474 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 Q6ZT83 130 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 COMMD6Q7Z4G1 85 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 EXOC3-AS1Q8N2X6 119 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 OR10P1Q8NGE3 313 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 PRADC1Q9BSG0 188 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 SFXN3Q9BWM7 321 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 MS4A6AQ9H2W1 248 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 BCORQ6W2J9 1755 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 SHANK3Q9BYB0 1731 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 C5P01031 1676 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 IGHV1OR15-9A0A0B4J2B8 117 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 A0A1B0GX51 115 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 TMEM223A0PJW6 202 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 F2Z2F3 143 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 H3BRM9 83 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 NPFFO15130 113 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 RER1O15258 196 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 C3orf79P0CE67 100 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 HTR1DP28221 377 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 TNFAIP6P98066 277 aaPredicted RBP3.53□□□□□ -1.84
UBR1-208ENST00000569066 SLC38A11Q08AI6 406 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 EDDM3AQ14507 147 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 LINC00483Q53H64 154 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 MRPL54Q6P161 138 aaKnown RBP3.53□□□□□ -1.84
UBR1-208ENST00000569066 OR5P3Q8WZ94 311 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 FAM103A1Q9BTL3 118 aaKnown RBP3.53□□□□□ -1.84
UBR1-208ENST00000569066 ZNRD1Q9P1U0 126 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 ZNF835Q9Y2P0 537 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 NOP16Q9Y3C1 178 aaKnown RBP3.53□□□□□ -1.84
UBR1-208ENST00000569066 YTHDF2Q9Y5A9 579 aaKnown RBP3.53□□□□□ -1.84
UBR1-208ENST00000569066 SOX21Q9Y651 276 aaPredicted RBP3.53□□□□□ -1.84
UBR1-208ENST00000569066 PXMP4Q9Y6I8 212 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 WDR90Q96KV7 1748 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.53□□□□□ -1.84
UBR1-208ENST00000569066 SCN8AQ9UQD0 1980 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 PXDNQ92626 1479 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 ALPK3Q96L96 1907 aa3.53□□□□□ -1.84
UBR1-208ENST00000569066 A0A0J9YW62 118 aa3.53□□□□□ -1.85
UBR1-208ENST00000569066 FAM236DA0A1B0GTK5 79 aa3.53□□□□□ -1.85
UBR1-208ENST00000569066 ISLRO14498 428 aa3.53□□□□□ -1.85
UBR1-208ENST00000569066 FAM236CP0DP71 79 aa3.53□□□□□ -1.85
UBR1-208ENST00000569066 G6PCP35575 357 aa3.53□□□□□ -1.85
UBR1-208ENST00000569066 RPS28P62857 69 aaKnown RBP3.53□□□□□ -1.85
UBR1-208ENST00000569066 EBI3Q14213 229 aa3.53□□□□□ -1.85
UBR1-208ENST00000569066 OR51T1Q8NGJ9 327 aa3.53□□□□□ -1.85
UBR1-208ENST00000569066 POP5Q969H6 163 aaKnown RBP3.53□□□□□ -1.85
UBR1-208ENST00000569066 MAL2Q969L2 176 aa3.53□□□□□ -1.85
UBR1-208ENST00000569066 AP1S3Q96PC3 154 aa3.53□□□□□ -1.85
UBR1-208ENST00000569066 TBL1YQ9BQ87 522 aa3.53□□□□□ -1.85
UBR1-208ENST00000569066 CST11Q9H112 138 aa3.53□□□□□ -1.85
UBR1-208ENST00000569066 MED31Q9Y3C7 131 aa3.53□□□□□ -1.85
UBR1-208ENST00000569066 BPTFQ12830 3046 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 DSPPQ9NZW4 1301 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 GBF1Q92538 1859 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 DDX60LQ5H9U9 1706 aaKnown RBP3.52□□□□□ -1.85
UBR1-208ENST00000569066 A0A1B0GX12 115 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 FMODQ06828 376 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 Q0VG73 95 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 TAL2Q16559 108 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 ZNF678Q5SXM1 525 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 TMEM86AQ8N2M4 240 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 SIGLECL1Q8N7X8 197 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 OR6K6Q8NGW6 343 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 ZNF563Q8TA94 476 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 JOSD2Q8TAC2 188 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 CYYR1Q96J86 154 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 ACER3Q9NUN7 267 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 ABRACLQ9P1F3 81 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 LMO7Q8WWI1 1683 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 STRCQ7RTU9 1775 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 MED12LQ86YW9 2145 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 ITGB4P16144 1822 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 DENND4CQ5VZ89 1909 aa3.52□□□□□ -1.85
UBR1-208ENST00000569066 RGPD2P0DJD1 1756 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 MAST2Q6P0Q8 1798 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 F8W1H4 67 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 LINC01619G3V211 115 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 ZNF737O75373 536 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 KLF7O75840 302 aaPredicted RBP3.51□□□□□ -1.85
UBR1-208ENST00000569066 IFITM1P13164 125 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 HIST1H1DP16402 221 aaKnown RBP3.51□□□□□ -1.85
UBR1-208ENST00000569066 IGFBP3P17936 291 aaPredicted RBP3.51□□□□□ -1.85
UBR1-208ENST00000569066 CA7P43166 264 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 RPL31P62899 125 aaKnown RBP3.51□□□□□ -1.85
UBR1-208ENST00000569066 C6orf99Q4VX62 202 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 C12orf73Q69YU5 71 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 OR5H2Q8NGV7 314 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 GNPNAT1Q96EK6 184 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms