RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 LOC105371242A0A075B767 164 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 A0A1B0GUS0 222 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-250ENST00000568290 WI2-2373I1.2A0A1W2PRP0 233 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 RBAKDNA6NC62 111 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 K7ENP7 123 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 GOSR1O95249 250 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 IL4P05112 153 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 FAM87AP0C7U9 286 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 FAM106CPP0CH98 169 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 SFTPCP11686 197 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 G0S2P27469 103 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 PTTG1IPP53801 180 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 GNG5P63218 68 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 SEC11AP67812 179 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 HIST1H1AQ02539 215 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-250ENST00000568290 C10orf55Q5SWW7 151 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 C16orf54Q6UWD8 224 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 TCF24Q7RTU0 167 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 ORMDL3Q8N138 153 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 FAM19A2Q8N3H0 131 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 TTC9CQ8N5M4 171 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 C11orf42Q8N5U0 333 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 ARPC1AQ92747 370 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 LINC00479Q96M42 142 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 AP1S3Q96PC3 154 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 SLC50A1Q9BRV3 221 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 NPFFR1Q9GZQ6 430 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 FBXL15Q9H469 300 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 C21orf62Q9NYP8 219 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 RABAC1Q9UI14 185 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 TRIOO75962 3097 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 LAMA1P25391 3075 aa6.07□□□□□ -1.44
ATXN3-250ENST00000568290 SZT2Q5T011 3432 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 A6NDN8 102 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 LINC01549A6NIU2 74 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 C2orf70A6NJV1 201 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 E7EUB6 86 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 LY6LH3BQJ8 138 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 SIVA1O15304 175 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 PLAUP00749 431 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 CA1P00915 261 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-250ENST00000568290 HES1Q14469 280 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 C5orf64Q2M2E5 130 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 MORN5Q5VZ52 161 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 LEMD1Q68G75 181 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 Q8N976 141 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 FAM168AQ92567 244 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 SMPXQ9UHP9 88 aa6.06□□□□□ -1.44
ATXN3-250ENST00000568290 DSCAML1Q8TD84 2053 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 DNAH14Q0VDD8 3507 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 IGHV3-72A0A0B4J1Y9 119 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 IGHV1-24A0A0C4DH33 117 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 SH2D7A6NKC9 451 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-250ENST00000568290 TIMM23O14925 209 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 IGLV1-40P01703 118 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 COX7A1P24310 79 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 SSBP2P81877 361 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-250ENST00000568290 RELQ04864 619 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-250ENST00000568290 KLRB1Q12918 225 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 UBE2V1Q13404 147 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 ZNF841Q6ZN19 808 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 ZNF491Q8N8L2 437 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 OR9G4Q8NGQ1 327 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 MRPL53Q96EL3 112 aaKnown RBP6.05□□□□□ -1.44
ATXN3-250ENST00000568290 ZNF414Q96IQ9 312 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 ASCL2Q99929 193 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 NXT2Q9NPJ8 142 aaKnown RBP6.05□□□□□ -1.44
ATXN3-250ENST00000568290 DCAF16Q9NXF7 216 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 COX11Q9Y6N1 276 aa6.05□□□□□ -1.44
ATXN3-250ENST00000568290 SPTBN5Q9NRC6 3674 aaKnown RBP6.05□□□□□ -1.44
ATXN3-250ENST00000568290 TET2Q6N021 2002 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-250ENST00000568290 FABP5P3A8MUU1 101 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 K7EIM0 57 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 IGKV1-17P01599 117 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 APOHP02749 345 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-250ENST00000568290 EBI3Q14213 229 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 LGALS9BQ3B8N2 356 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 UTF1Q5T230 341 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 LINC01545Q5VT33 79 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 SAMD13Q5VXD3 122 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 LGALS9CQ6DKI2 356 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 EBLN2Q6P2I7 272 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 SIGLEC15Q6ZMC9 328 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 GTF2H5Q6ZYL4 71 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 OR4C5Q8NGB2 326 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 OR4X2Q8NGF9 303 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 ZNRD1Q9P1U0 126 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 PEF1Q9UBV8 284 aaKnown RBP6.04□□□□□ -1.44
ATXN3-250ENST00000568290 SH3BGRL2Q9UJC5 107 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 DIDO1Q9BTC0 2240 aaKnown RBP6.04□□□□□ -1.44
ATXN3-250ENST00000568290 DSCAMO60469 2012 aa6.04□□□□□ -1.44
ATXN3-250ENST00000568290 IGLV11-55A0A075B6I3 123 aa6.03□□□□□ -1.44
ATXN3-250ENST00000568290 A0A087X0K7 114 aa6.03□□□□□ -1.44
ATXN3-250ENST00000568290 TRBV7-1A0A0A6YYK4 115 aa6.03□□□□□ -1.44
ATXN3-250ENST00000568290 NCBP2LA6PVI3 153 aaKnown RBP6.03□□□□□ -1.44
ATXN3-250ENST00000568290 ODF3BA8MYP8 253 aa6.03□□□□□ -1.44
ATXN3-250ENST00000568290 CD5LO43866 347 aa6.03□□□□□ -1.44
ATXN3-250ENST00000568290 PPP1R17O96001 155 aa6.03□□□□□ -1.44
ATXN3-250ENST00000568290 HBDP02042 147 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms