RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 SCNM1Q9BWG6 230 aa8.84□□□□□ -0.99
PALB2-206ENST00000568219 RPUSD1Q9UJJ7 312 aaKnown RBP8.84□□□□□ -0.99
PALB2-206ENST00000568219 NPIPB5A8MRT5 1133 aa8.83□□□□□ -1
PALB2-206ENST00000568219 IGHV3-23P01764 117 aa8.83□□□□□ -1
PALB2-206ENST00000568219 PPBPP02775 128 aa8.83□□□□□ -1
PALB2-206ENST00000568219 LOXL3P58215 753 aa8.83□□□□□ -1
PALB2-206ENST00000568219 OR5AN1Q8NGI8 311 aa8.83□□□□□ -1
PALB2-206ENST00000568219 OR5A1Q8NGJ0 315 aa8.83□□□□□ -1
PALB2-206ENST00000568219 ZNF479Q96JC4 524 aa8.83□□□□□ -1
PALB2-206ENST00000568219 KMT2EQ8IZD2 1858 aa8.83□□□□□ -1
PALB2-206ENST00000568219 C19orf67A6NJJ6 358 aa8.83□□□□□ -1
PALB2-206ENST00000568219 C15orf65H3BRN8 121 aa8.83□□□□□ -1
PALB2-206ENST00000568219 NDUFS8O00217 210 aa8.83□□□□□ -1
PALB2-206ENST00000568219 HBDP02042 147 aa8.83□□□□□ -1
PALB2-206ENST00000568219 S100A4P26447 101 aaKnown RBP8.83□□□□□ -1
PALB2-206ENST00000568219 ZNF503Q96F45 646 aa8.83□□□□□ -1
PALB2-206ENST00000568219 MAP1LC3AQ9H492 121 aa8.83□□□□□ -1
PALB2-206ENST00000568219 C1RLQ9NZP8 487 aa8.83□□□□□ -1
PALB2-206ENST00000568219 SPRR3Q9UBC9 169 aa8.83□□□□□ -1
PALB2-206ENST00000568219 FAM90A9PA6NNJ1 464 aa8.83□□□□□ -1
PALB2-206ENST00000568219 APOMO95445 188 aa8.83□□□□□ -1
PALB2-206ENST00000568219 DLX1P56177 255 aa8.83□□□□□ -1
PALB2-206ENST00000568219 DEFB109BQ30KR1 87 aa8.83□□□□□ -1
PALB2-206ENST00000568219 PILRBQ9UKJ0 227 aa8.83□□□□□ -1
PALB2-206ENST00000568219 IGKV3-7A0A075B6H7 116 aa8.82□□□□□ -1
PALB2-206ENST00000568219 SMAD7O15105 426 aaKnown RBP8.82□□□□□ -1
PALB2-206ENST00000568219 KRTAP27-1Q3LI81 207 aa8.82□□□□□ -1
PALB2-206ENST00000568219 IGFL4Q6B9Z1 124 aa8.82□□□□□ -1
PALB2-206ENST00000568219 LYZL1Q6UWQ5 148 aa8.82□□□□□ -1
PALB2-206ENST00000568219 SH2D6Q7Z4S9 175 aa8.82□□□□□ -1
PALB2-206ENST00000568219 OR4X2Q8NGF9 303 aa8.82□□□□□ -1
PALB2-206ENST00000568219 OSR1Q8TAX0 266 aaPredicted RBP8.82□□□□□ -1
PALB2-206ENST00000568219 FBXL15Q9H469 300 aa8.82□□□□□ -1
PALB2-206ENST00000568219 SRRM5B3KS81 715 aa8.82□□□□□ -1
PALB2-206ENST00000568219 H3BMG7 143 aa8.82□□□□□ -1
PALB2-206ENST00000568219 IGLV2-8P01709 118 aa8.82□□□□□ -1
PALB2-206ENST00000568219 SOX21Q9Y651 276 aaPredicted RBP8.82□□□□□ -1
PALB2-206ENST00000568219 K7EP34 96 aa8.82□□□□□ -1
PALB2-206ENST00000568219 FAM90A1Q86YD7 464 aa8.82□□□□□ -1
PALB2-206ENST00000568219 MRPL16Q9NX20 251 aaKnown RBP8.82□□□□□ -1
PALB2-206ENST00000568219 PSG8Q9UQ74 426 aa8.82□□□□□ -1
PALB2-206ENST00000568219 SPG11Q96JI7 2443 aa8.82□□□□□ -1
PALB2-206ENST00000568219 H3BRM9 83 aa8.81□□□□□ -1
PALB2-206ENST00000568219 P0C879 139 aa8.81□□□□□ -1
PALB2-206ENST00000568219 PSMB2P49721 201 aa8.81□□□□□ -1
PALB2-206ENST00000568219 RHOGP84095 191 aa8.81□□□□□ -1
PALB2-206ENST00000568219 PMS2CLQ68D20 193 aa8.81□□□□□ -1
PALB2-206ENST00000568219 TTC9CQ8N5M4 171 aa8.81□□□□□ -1
PALB2-206ENST00000568219 Q8N7P7 452 aa8.81□□□□□ -1
PALB2-206ENST00000568219 GTSF1Q8WW33 167 aa8.81□□□□□ -1
PALB2-206ENST00000568219 IGHV3-49A0A0A0MS15 119 aa8.81□□□□□ -1
PALB2-206ENST00000568219 NKX2-8O15522 239 aa8.81□□□□□ -1
PALB2-206ENST00000568219 RNFT1Q5M7Z0 435 aa8.81□□□□□ -1
PALB2-206ENST00000568219 ZC2HC1BQ5TFG8 222 aa8.81□□□□□ -1
PALB2-206ENST00000568219 SCRT2Q9NQ03 307 aa8.81□□□□□ -1
PALB2-206ENST00000568219 DKK2Q9UBU2 259 aa8.81□□□□□ -1
PALB2-206ENST00000568219 TMPRSS3P57727 454 aa8.81□□□□□ -1
PALB2-206ENST00000568219 LINC00322Q6ZN03 302 aaPredicted RBP8.81□□□□□ -1
PALB2-206ENST00000568219 C11orf53Q8IXP5 236 aa8.81□□□□□ -1
PALB2-206ENST00000568219 C2CD3Q4AC94 2353 aa8.81□□□□□ -1
PALB2-206ENST00000568219 A0A1W2PPM0 123 aa8.8□□□□□ -1
PALB2-206ENST00000568219 SPANXN1Q5VSR9 72 aa8.8□□□□□ -1
PALB2-206ENST00000568219 C9orf106Q8NAJ2 232 aa8.8□□□□□ -1
PALB2-206ENST00000568219 ZNF747Q9BV97 191 aa8.8□□□□□ -1
PALB2-206ENST00000568219 IGHV3-66A0A0C4DH42 116 aa8.8□□□□□ -1
PALB2-206ENST00000568219 WT1-ASQ06250 92 aa8.8□□□□□ -1
PALB2-206ENST00000568219 GAGE13Q4V321 117 aa8.8□□□□□ -1
PALB2-206ENST00000568219 Q8TAT8 98 aa8.8□□□□□ -1
PALB2-206ENST00000568219 PRR7Q8TB68 274 aa8.8□□□□□ -1
PALB2-206ENST00000568219 ARPC1AQ92747 370 aa8.8□□□□□ -1
PALB2-206ENST00000568219 IGF2BP2-AS1Q96M15 143 aa8.8□□□□□ -1
PALB2-206ENST00000568219 ONECUT1Q9UBC0 465 aa8.8□□□□□ -1
PALB2-206ENST00000568219 TNRC6AQ8NDV7 1962 aaKnown RBP8.8□□□□□ -1
PALB2-206ENST00000568219 FAM106CPP0CH98 169 aa8.8□□□□□ -1
PALB2-206ENST00000568219 FAM106AQ4KMX7 169 aa8.8□□□□□ -1
PALB2-206ENST00000568219 KLF17Q5JT82 389 aaPredicted RBP8.8□□□□□ -1
PALB2-206ENST00000568219 OR9G4Q8NGQ1 327 aa8.8□□□□□ -1
PALB2-206ENST00000568219 C21orf140B9A014 251 aa8.8□□□□□ -1
PALB2-206ENST00000568219 J3QW42 95 aa8.8□□□□□ -1
PALB2-206ENST00000568219 SCGB2A1O75556 95 aa8.8□□□□□ -1
PALB2-206ENST00000568219 KLF5Q13887 457 aaPredicted RBP8.8□□□□□ -1
PALB2-206ENST00000568219 DIAPH2-AS1Q14236 149 aa8.8□□□□□ -1
PALB2-206ENST00000568219 SLC25A48Q6ZT89 311 aaKnown RBP8.8□□□□□ -1
PALB2-206ENST00000568219 FAM231DQ6ZW35 169 aa8.8□□□□□ -1
PALB2-206ENST00000568219 RPRMLQ8N4K4 120 aa8.8□□□□□ -1
PALB2-206ENST00000568219 FXYD5Q96DB9 178 aa8.8□□□□□ -1
PALB2-206ENST00000568219 CYSLTR1Q9Y271 337 aa8.79□□□□□ -1
PALB2-206ENST00000568219 IGHV1-18A0A0C4DH31 117 aa8.79□□□□□ -1
PALB2-206ENST00000568219 LY6G6EA0A0G2JKS1 128 aa8.79□□□□□ -1
PALB2-206ENST00000568219 RAB9AP51151 201 aa8.79□□□□□ -1
PALB2-206ENST00000568219 SPRNQ5BIV9 151 aa8.79□□□□□ -1
PALB2-206ENST00000568219 TDHQ8IZJ6 230 aa8.79□□□□□ -1
PALB2-206ENST00000568219 SRSF8Q9BRL6 282 aaKnown RBP8.79□□□□□ -1
PALB2-206ENST00000568219 U3KQA8 63 aa8.79□□□□□ -1
PALB2-206ENST00000568219 GAGE12HA6NDE8 117 aa8.79□□□□□ -1
PALB2-206ENST00000568219 FTH1P19P0C7X4 201 aa8.79□□□□□ -1
PALB2-206ENST00000568219 WFDC2Q14508 124 aa8.79□□□□□ -1
PALB2-206ENST00000568219 PATE2Q6UY27 113 aa8.79□□□□□ -1
PALB2-206ENST00000568219 EYSQ5T1H1 3165 aa8.78□□□□□ -1
PALB2-206ENST00000568219 IGKV2-40A0A087WW87 121 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms