RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 OSR2Q8N2R0 312 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 EEF1AKMT3Q96AZ1 226 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 ARHGAP21Q5T5U3 1957 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 SEC61GP60059 68 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 SPACA3Q8IXA5 215 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 ARPC1AQ92747 370 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 PRORYQ9H606 182 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 PRO0461Q9UI25 63 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 LCTP09848 1927 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 ACACAQ13085 2346 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 IZUMO1RA6ND01 250 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 VWC2LB2RUY7 222 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 SYS1-DBNDD2H3BUS1 97 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 PGLYRP1O75594 196 aaPredicted RBP2.4□□□□□ -2.03
CHD9-218ENST00000566029 CLDN14O95500 239 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 SCO2A0A1W2PP80 73 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 ZNF716A6NP11 495 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 COX7A2P2O60397 106 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 SIGLEC15Q6ZMC9 328 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 GPHA2Q96T91 129 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 PRSS46E5RG02 174 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 IGHG4P01861 327 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 TFF1P04155 84 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 LIFP15018 202 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 NRACQ8N912 160 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 OR4X2Q8NGF9 303 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 SRSF12Q8WXF0 261 aaKnown RBP2.39□□□□□ -2.03
CHD9-218ENST00000566029 DDB2Q92466 427 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 PTH2Q96A98 100 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 ZNF492Q9P255 531 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 COX8AP10176 69 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 C7orf69Q9H7B7 122 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 SIGLEC8Q9NYZ4 499 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 TICRRQ7Z2Z1 1910 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 A0A087X0K7 114 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 A0A1B0GX51 115 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 OVOL3O00110 214 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 EFNA2O43921 213 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 CEACAM4O75871 244 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 CXCL10P02778 98 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 DEFA4P12838 97 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 DNAJC30Q96LL9 226 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 IGF2BP2-AS1Q96M15 143 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 PSG2P11465 335 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 RPL18AQ02543 176 aaKnown RBP2.39□□□□□ -2.03
CHD9-218ENST00000566029 NNATQ16517 81 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 CEACAM16Q2WEN9 425 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 DCTN5Q9BTE1 182 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 SLC25A39Q9BZJ4 359 aaPredicted RBP2.39□□□□□ -2.03
CHD9-218ENST00000566029 IGHV3-7P01780 117 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 SNRPD3P62318 126 aaKnown RBP2.39□□□□□ -2.03
CHD9-218ENST00000566029 SCGB3A1Q96QR1 104 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 URB1O60287 2271 aaKnown RBP2.39□□□□□ -2.03
CHD9-218ENST00000566029 A0A1W2PRU2 124 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 UBE2AP49459 152 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 SFTPA2Q8IWL1 248 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 ADAMTS9Q9P2N4 1935 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 CCDC179H3BU77 68 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 LEPROTL1O95214 131 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 RFPL3SP0C7P2 107 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 CCL5P13501 91 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 FAM231DQ6ZW35 169 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 TPRX1Q8N7U7 411 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 ESM1Q9NQ30 184 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 DKK4Q9UBT3 224 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 KLF12Q9Y4X4 402 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 IGKV3D-11A0A0A0MRZ8 115 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 FAM240AA0A1B0GVK7 77 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 A0A1W2PPM0 123 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 SCRG1O75711 98 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 LY6G5CQ5SRR4 150 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 RPEQ96AT9 228 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 NPCDR1Q9BY65 106 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 HIGD1BQ9P298 99 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 TET2Q6N021 2002 aaPredicted RBP2.39□□□□□ -2.03
CHD9-218ENST00000566029 TRAV26-2A0A0B4J265 109 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 H3BUA1 57 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 IGKV3-11P04433 115 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 BRWD1-AS2P59051 145 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 PIGYQ3MUY2 71 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 UTF1Q5T230 341 aa2.39□□□□□ -2.03
CHD9-218ENST00000566029 PQLC2Q6ZP29 291 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 PRADC1Q9BSG0 188 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 CHCHD5Q9BSY4 110 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 SDK1Q7Z5N4 2213 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 F6UB75 175 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.38□□□□□ -2.03
CHD9-218ENST00000566029 TNFRSF13BO14836 293 aaPredicted RBP2.38□□□□□ -2.03
CHD9-218ENST00000566029 RER1O15258 196 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 ZNF688P0C7X2 276 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 GATA1P15976 413 aaPredicted RBP2.38□□□□□ -2.03
CHD9-218ENST00000566029 EDN2P20800 178 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 HOXD3P31249 432 aaPredicted RBP2.38□□□□□ -2.03
CHD9-218ENST00000566029 RPS28P62857 69 aaKnown RBP2.38□□□□□ -2.03
CHD9-218ENST00000566029 MIC13Q5XKP0 118 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 Q6P435 159 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 RND1Q92730 232 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 RASL11BQ9BPW5 248 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 TMEM133Q9H2Q1 129 aa2.38□□□□□ -2.03
CHD9-218ENST00000566029 A0A1B0GXF2 115 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms