RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	LPAR2	Q9HBW0	351 aa		10.45	□□□□□ -0.74
SCAPER-215	ENST00000565507	HIGD1A	Q9Y241	93 aa		10.45	□□□□□ -0.74
SCAPER-215	ENST00000565507	C2orf70	A6NJV1	201 aa		10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507		A8MWL6	223 aa		10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507	IGLV2-11	P01706	119 aa		10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507	MAJIN	Q3KP22	176 aa		10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507	OR8B3	Q8NGG8	313 aa		10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507	OR8B2	Q96RD0	313 aa		10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507	UQCR10	Q9UDW1	63 aa		10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507	SPG11	Q96JI7	2443 aa		10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507	NPIPB6	E9PJ23	425 aa		10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507		P01737	135 aa		10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507		Q71RC1	249 aa	Predicted RBP	10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507	TMEM14C	Q9P0S9	112 aa		10.44	□□□□□ -0.74
SCAPER-215	ENST00000565507	TRAV8-1	A0A0A6YYK1	113 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	LY6L	H3BQJ8	138 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507		M0R2Z0	102 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	IGKV1-17	P01599	117 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	HOXB4	P17483	251 aa	Predicted RBP	10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	LYZ	P61626	148 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	LDLRAD2	Q5SZI1	272 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	ATOH7	Q8N100	152 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	GFRA4	Q9GZZ7	299 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	OVOL3	O00110	214 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	DLEU1	O43261	78 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	LY6H	O94772	140 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	CD24	P25063	80 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	UQCRFS1	P47985	274 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	BATF	Q16520	125 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	RNASEK	Q6P5S7	137 aa	Known RBP	10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	RBM14	Q96PK6	669 aa	Known RBP	10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	OTOR	Q9NRC9	128 aa		10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	SOX21	Q9Y651	276 aa	Predicted RBP	10.43	□□□□□ -0.74
SCAPER-215	ENST00000565507	PPIAL4C	A0A0B4J2A2	164 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	ZNF785	A8K8V0	405 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	PPIAL4G	P0DN37	164 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	COX7A1	P24310	79 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	PMCHL1	Q16048	86 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	FAM120AOS	Q5T036	256 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507		Q86TA4	180 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	KIR3DL3	Q8N743	410 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	PGLYRP4	Q96LB8	373 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	FAM231B	A6NCW3	169 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	RBP4	P02753	201 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	CD3E	P07766	207 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	GAGE1	Q13065	139 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	SPATA12	Q7Z6I5	190 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	EXOC3-AS1	Q8N2X6	119 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	RPE	Q96AT9	228 aa		10.42	□□□□□ -0.74
SCAPER-215	ENST00000565507	ZNF462	Q96JM2	2506 aa		10.41	□□□□□ -0.74
SCAPER-215	ENST00000565507	BTF3	P20290	206 aa	Known RBP	10.41	□□□□□ -0.74
SCAPER-215	ENST00000565507	C16orf54	Q6UWD8	224 aa		10.41	□□□□□ -0.74
SCAPER-215	ENST00000565507	CIART	Q8N365	385 aa	Predicted RBP	10.41	□□□□□ -0.74
SCAPER-215	ENST00000565507	RNF5	Q99942	180 aa		10.41	□□□□□ -0.74
SCAPER-215	ENST00000565507		K7EIM0	57 aa		10.41	□□□□□ -0.74
SCAPER-215	ENST00000565507	APOH	P02749	345 aa	Predicted RBP	10.41	□□□□□ -0.74
SCAPER-215	ENST00000565507	TFPI2	P48307	235 aa		10.41	□□□□□ -0.74
SCAPER-215	ENST00000565507	FOXA3	P55318	350 aa	Predicted RBP	10.41	□□□□□ -0.74
SCAPER-215	ENST00000565507		Q6ZN92	141 aa		10.41	□□□□□ -0.74
SCAPER-215	ENST00000565507	KLHDC1	Q8N7A1	406 aa		10.41	□□□□□ -0.74
SCAPER-215	ENST00000565507	RASL11B	Q9BPW5	248 aa		10.41	□□□□□ -0.74
SCAPER-215	ENST00000565507	SH2D7	A6NKC9	451 aa	Predicted RBP	10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	ARHGAP32	A7KAX9	2087 aa		10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507		M0QZ24	198 aa		10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507		Q56UQ5	140 aa		10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	COL5A1-AS1	Q5SY13	56 aa		10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	DAZAP1	Q96EP5	407 aa	Known RBP	10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	TXN2	Q99757	166 aa		10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	NPS	P0C0P6	89 aa		10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	FOSL1	P15407	271 aa		10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	GOLT1A	Q6ZVE7	132 aa		10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	STPG4	Q8N801	248 aa		10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	SRSF8	Q9BRL6	282 aa	Known RBP	10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	PRORY	Q9H606	182 aa		10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	LAMTOR2	Q9Y2Q5	125 aa		10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	LRRK2	Q5S007	2527 aa		10.4	□□□□□ -0.74
SCAPER-215	ENST00000565507	TRAV9-2	A0A087WT02	112 aa		10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	COL8A1	P27658	744 aa		10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	MUC15	Q8N387	334 aa		10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	C17orf77	Q96MU5	243 aa		10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	CLEC5A	Q9NY25	188 aa		10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	TRBV19	A0A075B6N1	114 aa		10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	TRBV6-1	A0A0K0K1D8	114 aa		10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	TIMM23	O14925	209 aa		10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	CRX	O43186	299 aa	Predicted RBP	10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	HNRNPA3	P51991	378 aa	Known RBP	10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	PRNT	Q86SH4	94 aa		10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	LY6G5B	Q8NDX9	201 aa		10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	SHANK2-AS3	Q9BTD1	123 aa		10.39	□□□□□ -0.75
SCAPER-215	ENST00000565507	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.38	□□□□□ -0.75
SCAPER-215	ENST00000565507	TOX4	O94842	621 aa		10.38	□□□□□ -0.75
SCAPER-215	ENST00000565507	IGLL1	P15814	213 aa		10.38	□□□□□ -0.75
SCAPER-215	ENST00000565507	TSPO	P30536	169 aa		10.38	□□□□□ -0.75
SCAPER-215	ENST00000565507	PLGLA	Q15195	96 aa		10.38	□□□□□ -0.75
SCAPER-215	ENST00000565507	NDFIP1	Q9BT67	221 aa		10.38	□□□□□ -0.75
SCAPER-215	ENST00000565507	GOLT1B	Q9Y3E0	138 aa		10.38	□□□□□ -0.75
SCAPER-215	ENST00000565507		H3BRN7	92 aa		10.38	□□□□□ -0.75
SCAPER-215	ENST00000565507	HAX1	O00165	279 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms