RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 RBP4P02753 201 aa12.3□□□□□ -0.44
GTF3C1-205ENST00000564747 RBX1P62877 108 aa12.3□□□□□ -0.44
GTF3C1-205ENST00000564747 CT83Q5H943 113 aa12.3□□□□□ -0.44
GTF3C1-205ENST00000564747 MUC15Q8N387 334 aa12.3□□□□□ -0.44
GTF3C1-205ENST00000564747 TMEM70Q9BUB7 260 aa12.3□□□□□ -0.44
GTF3C1-205ENST00000564747 SLC25A39Q9BZJ4 359 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-205ENST00000564747 PRR30Q53SZ7 412 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-205ENST00000564747 RBPMS2Q6ZRY4 209 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-205ENST00000564747 GOLT1AQ6ZVE7 132 aa12.29□□□□□ -0.44
GTF3C1-205ENST00000564747 SRSF12Q8WXF0 261 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-205ENST00000564747 TNFRSF14Q92956 283 aa12.29□□□□□ -0.44
GTF3C1-205ENST00000564747 FAM120AOSQ5T036 256 aa12.29□□□□□ -0.44
GTF3C1-205ENST00000564747 LINC00173Q6ZV60 143 aa12.29□□□□□ -0.44
GTF3C1-205ENST00000564747 PRNTQ86SH4 94 aa12.29□□□□□ -0.44
GTF3C1-205ENST00000564747 ASCL2Q99929 193 aa12.29□□□□□ -0.44
GTF3C1-205ENST00000564747 I3L2K1 104 aa12.28□□□□□ -0.44
GTF3C1-205ENST00000564747 IGLV2-11P01706 119 aa12.28□□□□□ -0.44
GTF3C1-205ENST00000564747 COL8A1P27658 744 aa12.28□□□□□ -0.44
GTF3C1-205ENST00000564747 FBLN7Q53RD9 439 aa12.28□□□□□ -0.44
GTF3C1-205ENST00000564747 Q86TA4 180 aa12.28□□□□□ -0.44
GTF3C1-205ENST00000564747 OTORQ9NRC9 128 aa12.28□□□□□ -0.44
GTF3C1-205ENST00000564747 APOBEC3AP31941 199 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-205ENST00000564747 C17orf77Q96MU5 243 aa12.28□□□□□ -0.44
GTF3C1-205ENST00000564747 RASL11BQ9BPW5 248 aa12.28□□□□□ -0.44
GTF3C1-205ENST00000564747 OR4C46A6NHA9 309 aa12.27□□□□□ -0.44
GTF3C1-205ENST00000564747 PLGLAQ15195 96 aa12.27□□□□□ -0.44
GTF3C1-205ENST00000564747 OR4C5Q8NGB2 326 aa12.27□□□□□ -0.44
GTF3C1-205ENST00000564747 RPEQ96AT9 228 aa12.27□□□□□ -0.44
GTF3C1-205ENST00000564747 GFRA4Q9GZZ7 299 aa12.27□□□□□ -0.44
GTF3C1-205ENST00000564747 NGBQ9NPG2 151 aa12.27□□□□□ -0.44
GTF3C1-205ENST00000564747 IGHV1-24A0A0C4DH33 117 aa12.27□□□□□ -0.45
GTF3C1-205ENST00000564747 K7EP13 123 aa12.27□□□□□ -0.45
GTF3C1-205ENST00000564747 IGKV1-17P01599 117 aa12.27□□□□□ -0.45
GTF3C1-205ENST00000564747 ZNF138P52744 262 aa12.27□□□□□ -0.45
GTF3C1-205ENST00000564747 PAX2Q02962 417 aa12.27□□□□□ -0.45
GTF3C1-205ENST00000564747 FAM162BQ5T6X4 162 aa12.27□□□□□ -0.45
GTF3C1-205ENST00000564747 SOX21Q9Y651 276 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-205ENST00000564747 LOC105371242A0A075B767 164 aa12.26□□□□□ -0.45
GTF3C1-205ENST00000564747 PPIAL4CA0A0B4J2A2 164 aa12.26□□□□□ -0.45
GTF3C1-205ENST00000564747 IGHV2-70DA0A0C4DH43 119 aa12.26□□□□□ -0.45
GTF3C1-205ENST00000564747 ZNF785A8K8V0 405 aa12.26□□□□□ -0.45
GTF3C1-205ENST00000564747 NPIPB6E9PJ23 425 aa12.26□□□□□ -0.45
GTF3C1-205ENST00000564747 PPIAL4GP0DN37 164 aa12.26□□□□□ -0.45
GTF3C1-205ENST00000564747 RBPJQ06330 500 aa12.26□□□□□ -0.45
GTF3C1-205ENST00000564747 LDLRAD2Q5SZI1 272 aa12.26□□□□□ -0.45
GTF3C1-205ENST00000564747 IGFBPL1Q8WX77 278 aa12.26□□□□□ -0.45
GTF3C1-205ENST00000564747 TMEM14CQ9P0S9 112 aa12.26□□□□□ -0.45
GTF3C1-205ENST00000564747 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-205ENST00000564747 CHEK1O14757 476 aa12.25□□□□□ -0.45
GTF3C1-205ENST00000564747 VAMP3Q15836 100 aa12.25□□□□□ -0.45
GTF3C1-205ENST00000564747 TP73-AS1Q9UF72 201 aa12.25□□□□□ -0.45
GTF3C1-205ENST00000564747 LOC102724200A0A096LPH7 203 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-205ENST00000564747 B9A039 149 aa12.25□□□□□ -0.45
GTF3C1-205ENST00000564747 CNIH1O95406 144 aa12.25□□□□□ -0.45
GTF3C1-205ENST00000564747 ST20Q9HBF5 79 aa12.25□□□□□ -0.45
GTF3C1-205ENST00000564747 ABCA4P78363 2273 aa12.25□□□□□ -0.45
GTF3C1-205ENST00000564747 CRXO43186 299 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 APOHP02749 345 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 ARHGAP32A7KAX9 2087 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 FAM231BA6NCW3 169 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 OVOL3O00110 214 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 LEPROTL1O95214 131 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 MPV17L2Q567V2 206 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 CHCHD1Q96BP2 118 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 ZC2HC1AQ96GY0 325 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 NDFIP1Q9BT67 221 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 SVEP1Q4LDE5 3571 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 TLN1Q9Y490 2541 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 SYS1-DBNDD2H3BUS1 97 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 K7EIM0 57 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 TIMM23O14925 209 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 HOXB4P17483 251 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 ANKRD39Q53RE8 183 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 LINC01560Q8TB33 94 aa12.24□□□□□ -0.45
GTF3C1-205ENST00000564747 TRBV19A0A075B6N1 114 aa12.23□□□□□ -0.45
GTF3C1-205ENST00000564747 HAX1O00165 279 aa12.23□□□□□ -0.45
GTF3C1-205ENST00000564747 CD3EP07766 207 aa12.23□□□□□ -0.45
GTF3C1-205ENST00000564747 CDKN1BP46527 198 aa12.23□□□□□ -0.45
GTF3C1-205ENST00000564747 S4R3C0 116 aa12.23□□□□□ -0.45
GTF3C1-205ENST00000564747 LY6LH3BQJ8 138 aa12.23□□□□□ -0.45
GTF3C1-205ENST00000564747 TCF15Q12870 199 aa12.23□□□□□ -0.45
GTF3C1-205ENST00000564747 KLF17Q5JT82 389 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-205ENST00000564747 MCRIP2Q9BUT9 160 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-205ENST00000564747 ONECUT1Q9UBC0 465 aa12.23□□□□□ -0.45
GTF3C1-205ENST00000564747 hDV102S1A0JD36 115 aa12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 CSN3P07498 182 aa12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 SAPCD1Q5SSQ6 148 aa12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 SHANK2-AS3Q9BTD1 123 aa12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 C1RLQ9NZP8 487 aa12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 TRAV30A0A087WSZ9 112 aa12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 ARMS2P0C7Q2 107 aa12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 C16orf54Q6UWD8 224 aa12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 ERASQ7Z444 233 aa12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 BPIFA4PQ86YQ2 179 aa12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 BCL6BQ8N143 479 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 SCNM1Q9BWG6 230 aa12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 HILPDAQ9Y5L2 63 aa12.22□□□□□ -0.45
GTF3C1-205ENST00000564747 HSBP1L1C9JCN9 74 aa12.21□□□□□ -0.45
GTF3C1-205ENST00000564747 NUDT3O95989 172 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms