RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 HYPMO75409 117 aa10.73□□□□□ -0.69
SPG7-210ENST00000564409 FXYD7P58549 80 aa10.73□□□□□ -0.69
SPG7-210ENST00000564409 DEFB1P60022 68 aa10.73□□□□□ -0.69
SPG7-210ENST00000564409 POLR2GP62487 172 aaKnown RBP eCLIP10.73□□□□□ -0.69
SPG7-210ENST00000564409 BAK1Q16611 211 aa10.73□□□□□ -0.69
SPG7-210ENST00000564409 RRN3P1Q2M238 152 aa10.73□□□□□ -0.69
SPG7-210ENST00000564409 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.73□□□□□ -0.69
SPG7-210ENST00000564409 IGF2BP2-AS1Q96M15 143 aa10.73□□□□□ -0.69
SPG7-210ENST00000564409 NIPSNAP3BQ9BS92 247 aa10.73□□□□□ -0.69
SPG7-210ENST00000564409 SHANK2-AS3Q9BTD1 123 aa10.73□□□□□ -0.69
SPG7-210ENST00000564409 NPVFQ9HCQ7 196 aa10.73□□□□□ -0.69
SPG7-210ENST00000564409 HIGD1AQ9Y241 93 aa10.73□□□□□ -0.69
SPG7-210ENST00000564409 SMCO3A2RU48 225 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 F6UB75 175 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 H3BRN7 92 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 K7EPK0 472 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 SSSCA1O60232 199 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 TSC22D2O75157 780 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 GATA2P23769 480 aaPredicted RBP10.72□□□□□ -0.69
SPG7-210ENST00000564409 EMP1P54849 157 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 C4orf46Q504U0 113 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 PXDC1Q5TGL8 231 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 TMEM14EPQ6UXP3 125 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 LINC00336Q6ZUF6 198 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 ZNF767PQ75MW2 155 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 C1orf158Q8N1D5 194 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 OR10P1Q8NGE3 313 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 C20orf173Q96LM9 149 aa10.72□□□□□ -0.69
SPG7-210ENST00000564409 SLC25A39Q9BZJ4 359 aaPredicted RBP10.72□□□□□ -0.69
SPG7-210ENST00000564409 LOC102723971A0A1B0GUV8 181 aa10.71□□□□□ -0.69
SPG7-210ENST00000564409 PMS2P5A8MQ11 134 aa10.71□□□□□ -0.69
SPG7-210ENST00000564409 FAM222AQ5U5X8 452 aa10.71□□□□□ -0.69
SPG7-210ENST00000564409 TEPPQ6URK8 271 aa10.71□□□□□ -0.69
SPG7-210ENST00000564409 AMTNQ6UX39 209 aa10.71□□□□□ -0.69
SPG7-210ENST00000564409 TMEM182Q6ZP80 229 aaPredicted RBP10.71□□□□□ -0.69
SPG7-210ENST00000564409 MITD1Q8WV92 249 aa10.71□□□□□ -0.69
SPG7-210ENST00000564409 C17orf77Q96MU5 243 aa10.71□□□□□ -0.69
SPG7-210ENST00000564409 TMEM208Q9BTX3 173 aa10.71□□□□□ -0.69
SPG7-210ENST00000564409 GGACTQ9BVM4 153 aa10.71□□□□□ -0.69
SPG7-210ENST00000564409 MGAT4CQ9UBM8 478 aa10.71□□□□□ -0.69
SPG7-210ENST00000564409 FLVCR2Q9UPI3 526 aa10.71□□□□□ -0.69
SPG7-210ENST00000564409 LINC00869P0C866 280 aa10.7□□□□□ -0.7
SPG7-210ENST00000564409 IAH1Q2TAA2 248 aaPredicted RBP10.7□□□□□ -0.7
SPG7-210ENST00000564409 SCRT1Q9BWW7 348 aa10.7□□□□□ -0.7
SPG7-210ENST00000564409 A0A087X0K7 114 aa10.69□□□□□ -0.7
SPG7-210ENST00000564409 INSP01308 110 aa10.69□□□□□ -0.7
SPG7-210ENST00000564409 OR5G3P0C626 314 aa10.69□□□□□ -0.7
SPG7-210ENST00000564409 BTCP35070 178 aa10.69□□□□□ -0.7
SPG7-210ENST00000564409 CNN1P51911 297 aaKnown RBP10.69□□□□□ -0.7
SPG7-210ENST00000564409 OR11H7Q8NGC8 314 aa10.69□□□□□ -0.7
SPG7-210ENST00000564409 SDHCQ99643 169 aaPredicted RBP10.69□□□□□ -0.7
SPG7-210ENST00000564409 YTHDF2Q9Y5A9 579 aaKnown RBP10.69□□□□□ -0.7
SPG7-210ENST00000564409 TRAV8-2A0A0B4J237 113 aa10.68□□□□□ -0.7
SPG7-210ENST00000564409 METTL15P1P0C7V9 234 aa10.68□□□□□ -0.7
SPG7-210ENST00000564409 IL7P13232 177 aa10.68□□□□□ -0.7
SPG7-210ENST00000564409 CXCL2P19875 107 aa10.68□□□□□ -0.7
SPG7-210ENST00000564409 ANXA7P20073 488 aaKnown RBP10.68□□□□□ -0.7
SPG7-210ENST00000564409 TSPOP30536 169 aa10.68□□□□□ -0.7
SPG7-210ENST00000564409 RNF212Q495C1 297 aa10.68□□□□□ -0.7
SPG7-210ENST00000564409 ZNF546Q86UE3 836 aa10.68□□□□□ -0.7
SPG7-210ENST00000564409 TMEM256Q8N2U0 113 aa10.68□□□□□ -0.7
SPG7-210ENST00000564409 ZBTB8BQ8NAP8 495 aaPredicted RBP10.68□□□□□ -0.7
SPG7-210ENST00000564409 ZNF738Q8NE65 137 aa10.68□□□□□ -0.7
SPG7-210ENST00000564409 DNAH6Q9C0G6 4158 aa10.68□□□□□ -0.7
SPG7-210ENST00000564409 LINC00854A0A1B0GVQ3 168 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 LYRM9A8MSI8 78 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 GOSR2O14653 212 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 SCGB1D2O95969 90 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 DAD1P61803 113 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 RRAS2P62070 204 aaPredicted RBP10.67□□□□□ -0.7
SPG7-210ENST00000564409 FGL1Q08830 312 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 ZNF846Q147U1 533 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 PSG3Q16557 428 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 LGALS9BQ3B8N2 356 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 LRRC20Q8TCA0 184 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 ARL6Q9H0F7 186 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 NDUFA13Q9P0J0 144 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 GSKIPQ9P0R6 139 aa10.67□□□□□ -0.7
SPG7-210ENST00000564409 BOLA2-SMG1P6H3BVE0 249 aa10.66□□□□□ -0.7
SPG7-210ENST00000564409 CXCL3P19876 107 aa10.66□□□□□ -0.7
SPG7-210ENST00000564409 SPINK13Q1W4C9 94 aa10.66□□□□□ -0.7
SPG7-210ENST00000564409 LCN15Q6UWW0 184 aa10.66□□□□□ -0.7
SPG7-210ENST00000564409 RNF182Q8N6D2 247 aa10.66□□□□□ -0.7
SPG7-210ENST00000564409 OR8A1Q8NGG7 326 aa10.66□□□□□ -0.7
SPG7-210ENST00000564409 UHRF2Q96PU4 802 aa10.66□□□□□ -0.7
SPG7-210ENST00000564409 ARV1Q9H2C2 271 aa10.66□□□□□ -0.7
SPG7-210ENST00000564409 RCL1Q9Y2P8 373 aaKnown RBP10.66□□□□□ -0.7
SPG7-210ENST00000564409 DNAH10Q8IVF4 4471 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 C7orf66A4D0T2 115 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 L7N2F9 121 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 M0R2Z0 102 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 AGPAT2O15120 278 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 CRXO43186 299 aaPredicted RBP10.65□□□□□ -0.7
SPG7-210ENST00000564409 CCNKO75909 580 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 MBPP02686 304 aaPredicted RBP10.65□□□□□ -0.7
SPG7-210ENST00000564409 FAM3BP58499 235 aaPredicted RBP10.65□□□□□ -0.7
SPG7-210ENST00000564409 VAMP2P63027 116 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 RAB31Q13636 194 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 GSG1LQ6UXU4 331 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 UBE2DNLQ8IWF7 75 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms