RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, human

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH11-208	ENST00000563492	CLUHP3	Q96NS8	147 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	C7orf50	Q9BRJ6	194 aa	Known RBP	4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	KRTAP4-5	Q9BYR2	181 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	CACFD1	Q9UGQ2	172 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	PKD1	P98161	4303 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	LINC00854	A0A1B0GVQ3	168 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	PLAC8L1	A1L4L8	177 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	C9orf170	A2RU37	121 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	SMCO3	A2RU48	225 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	TMEM189	A5PLL7	270 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	PMS2P5	A8MQ11	134 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492		A8MTW9	85 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	IFNA21	P01568	189 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	HBE1	P02100	147 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	FABP1	P07148	127 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	DEFB130B	P0DP73	79 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	DEFB130A	P0DP74	79 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	SLC25A6	P12236	298 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	NUP62	P37198	522 aa	Predicted RBP	4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	ID3	Q02535	119 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	AKR1C1	Q04828	323 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	KIR3DS1	Q14943	382 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	RRN3P1	Q2M238	152 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	LGALS9B	Q3B8N2	356 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	CCDC190	Q86UF4	302 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	UBE2DNL	Q8IWF7	75 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	OR11H7	Q8NGC8	314 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	IGF2BP2-AS1	Q96M15	143 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	UHRF2	Q96PU4	802 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	BCL7B	Q9BQE9	202 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	RPRM	Q9NS64	109 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	PFDN2	Q9UHV9	154 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	GOLT1B	Q9Y3E0	138 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	TMED3	Q9Y3Q3	217 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	ABCA13	Q86UQ4	5058 aa		4.87	□□□□□ -1.63
CDH11-208	ENST00000563492	DUXB	A0A1W2PPF3	345 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492		H3BRN7	92 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492		H3BTX0	84 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	MED6	O75586	246 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	ANXA7	P20073	488 aa	Known RBP	4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	FAU	P35544	74 aa	Known RBP	4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	GALR1	P47211	349 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	UBE2M	P61081	183 aa	Known RBP	4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	DAD1	P61803	113 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	RRAS2	P62070	204 aa	Predicted RBP	4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	ARL16	Q0P5N6	197 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	BAK1	Q16611	211 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	SPATA31B1P	Q5VZV4	182 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	PATE2	Q6UY27	113 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	CYP2G1P	Q6ZSU1	146 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	BPIFC	Q8NFQ6	507 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	CIB3	Q96Q77	187 aa	Predicted RBP	4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	SHANK2-AS3	Q9BTD1	123 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	TMEM208	Q9BTX3	173 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	TMEM147	Q9BVK8	224 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	PSENEN	Q9NZ42	101 aa		4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	STRAP	Q9Y3F4	350 aa	Known RBP	4.86	□□□□□ -1.63
CDH11-208	ENST00000563492	CCDC160	A6NGH7	325 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	PRAC2	D3DTV9	90 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	MRPS12	O15235	138 aa	Known RBP	4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	SSSCA1	O60232	199 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	NOL3	O60936	208 aa	Known RBP	4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	IL5	P05113	134 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	OR5G3	P0C626	314 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	METTL15P1	P0C7V9	234 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	MED14OS	P0DP75	135 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	HTN1	P15515	57 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	CXCL3	P19876	107 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	MEOX2	P50222	304 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	AP3S2	P59780	193 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	HIST1H1A	Q02539	215 aa	Predicted RBP	4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	SLC38A11	Q08AI6	406 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	OXA1L	Q15070	435 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	MORN5	Q5VZ52	161 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	TMEM144	Q7Z5S9	345 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	ZNF738	Q8NE65	137 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	OR4D5	Q8NGN0	318 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	FAM210B	Q96KR6	192 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	SDHC	Q99643	169 aa	Predicted RBP	4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	SRR	Q9GZT4	340 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	RBM38	Q9H0Z9	239 aa	Known RBP	4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	SLC45A2	Q9UMX9	530 aa		4.85	□□□□□ -1.63
CDH11-208	ENST00000563492	FAM25E	A8MYX2	175 aa		4.84	□□□□□ -1.63
CDH11-208	ENST00000563492		F5H768	121 aa		4.84	□□□□□ -1.63
CDH11-208	ENST00000563492	BOLA2-SMG1P6	H3BVE0	249 aa		4.84	□□□□□ -1.63
CDH11-208	ENST00000563492	HYPM	O75409	117 aa		4.84	□□□□□ -1.63
CDH11-208	ENST00000563492	NDUFB6	O95139	128 aa		4.84	□□□□□ -1.63
CDH11-208	ENST00000563492	DUSP14	O95147	198 aa	Known RBP	4.84	□□□□□ -1.63
CDH11-208	ENST00000563492	SCGB1D2	O95969	90 aa		4.84	□□□□□ -1.63
CDH11-208	ENST00000563492	NUDT3	O95989	172 aa		4.84	□□□□□ -1.63
CDH11-208	ENST00000563492	CFD	P00746	253 aa	Predicted RBP	4.84	□□□□□ -1.63
CDH11-208	ENST00000563492	INS	P01308	110 aa		4.84	□□□□□ -1.63
CDH11-208	ENST00000563492	OR4E1	P0C645	316 aa		4.84	□□□□□ -1.63
CDH11-208	ENST00000563492	LINC00869	P0C866	280 aa		4.84	□□□□□ -1.63
CDH11-208	ENST00000563492	BTC	P35070	178 aa		4.84	□□□□□ -1.63
CDH11-208	ENST00000563492	RHOB	P62745	196 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms