RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 USMG5Q96IX5 58 aa10.05□□□□□ -0.8
SPG7-207ENST00000563218 SLC25A22Q9H936 323 aa10.05□□□□□ -0.8
SPG7-207ENST00000563218 PEF1Q9UBV8 284 aaKnown RBP10.05□□□□□ -0.8
SPG7-207ENST00000563218 MAP1LC3B2A6NCE7 125 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 RBMY1BA6NDE4 496 aaKnown RBP10.04□□□□□ -0.8
SPG7-207ENST00000563218 RBMY1EA6NEQ0 496 aaKnown RBP10.04□□□□□ -0.8
SPG7-207ENST00000563218 BMPR1BO00238 502 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 COX7A2P2O60397 106 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 CD7P09564 240 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 RBMY1DP0C7P1 496 aaKnown RBP10.04□□□□□ -0.8
SPG7-207ENST00000563218 CD81P60033 236 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 RHOBP62745 196 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 ZNF726P1Q15940 193 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 RPEL1Q2QD12 228 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 LCN12Q6JVE5 192 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 LCN15Q6UWW0 184 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 DEFB125Q8N687 156 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 LYPD6BQ8NI32 183 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 MBD3L1Q8WWY6 194 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 MARC2Q969Z3 335 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 PFDN5Q99471 154 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 MAP1LC3BQ9GZQ8 125 aa10.04□□□□□ -0.8
SPG7-207ENST00000563218 VPS13DQ5THJ4 4388 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 A0A0G2JLM5 398 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 A0A1B0GV50 99 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 OR2T8A6NH00 312 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 F8W735 103 aaPredicted RBP10.03□□□□□ -0.8
SPG7-207ENST00000563218 NUPL2O15504 423 aaKnown RBP10.03□□□□□ -0.8
SPG7-207ENST00000563218 TOMM40O96008 361 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 IGKV1-17P01599 117 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 RD3LP0DJH9 198 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 PSG1P11464 419 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 YPEL3P61236 119 aaPredicted RBP10.03□□□□□ -0.8
SPG7-207ENST00000563218 CD300EQ496F6 205 aaPredicted RBP10.03□□□□□ -0.8
SPG7-207ENST00000563218 Q8WTZ3 238 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 GATAD1Q8WUU5 269 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 RAB24Q969Q5 203 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 ATP6V0BQ99437 205 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 RNF2Q99496 336 aa10.03□□□□□ -0.8
SPG7-207ENST00000563218 ELOA3CA0A087WX78 387 aaPredicted RBP10.02□□□□□ -0.81
SPG7-207ENST00000563218 TRAV1-1A0A0B4J248 108 aa10.02□□□□□ -0.81
SPG7-207ENST00000563218 OR5G3P0C626 314 aa10.02□□□□□ -0.81
SPG7-207ENST00000563218 GPR183P32249 361 aa10.02□□□□□ -0.81
SPG7-207ENST00000563218 FAM78BQ5VT40 261 aa10.02□□□□□ -0.81
SPG7-207ENST00000563218 C10orf113Q5VZT2 155 aa10.02□□□□□ -0.81
SPG7-207ENST00000563218 SPSB3Q6PJ21 355 aa10.02□□□□□ -0.81
SPG7-207ENST00000563218 CLEC19AQ6UXS0 136 aa10.02□□□□□ -0.81
SPG7-207ENST00000563218 SSX7Q7RTT5 188 aa10.02□□□□□ -0.81
SPG7-207ENST00000563218 OR51G1Q8NGK1 321 aa10.02□□□□□ -0.81
SPG7-207ENST00000563218 MRPL32Q9BYC8 188 aaKnown RBP10.02□□□□□ -0.81
SPG7-207ENST00000563218 DNAJC4Q9NNZ3 241 aa10.02□□□□□ -0.81
SPG7-207ENST00000563218 SIGLEC8Q9NYZ4 499 aa10.02□□□□□ -0.81
SPG7-207ENST00000563218 DOK5Q9P104 306 aa10.02□□□□□ -0.81
SPG7-207ENST00000563218 DNAH6Q9C0G6 4158 aa10.01□□□□□ -0.81
SPG7-207ENST00000563218 RAB19A4D1S5 217 aa10.01□□□□□ -0.81
SPG7-207ENST00000563218 ZNF785A8K8V0 405 aa10.01□□□□□ -0.81
SPG7-207ENST00000563218 HMGB3O15347 200 aaKnown RBP10.01□□□□□ -0.81
SPG7-207ENST00000563218 HYPMO75409 117 aa10.01□□□□□ -0.81
SPG7-207ENST00000563218 CLEC3BP05452 202 aa10.01□□□□□ -0.81
SPG7-207ENST00000563218 ORM2P19652 201 aa10.01□□□□□ -0.81
SPG7-207ENST00000563218 FGF8P55075 233 aaPredicted RBP10.01□□□□□ -0.81
SPG7-207ENST00000563218 PLP1P60201 277 aa10.01□□□□□ -0.81
SPG7-207ENST00000563218 LYZP61626 148 aa10.01□□□□□ -0.81
SPG7-207ENST00000563218 OR1B1Q8NGR6 318 aa10.01□□□□□ -0.81
SPG7-207ENST00000563218 CCDC140Q96MF4 163 aa10.01□□□□□ -0.81
SPG7-207ENST00000563218 SRD5A3Q9H8P0 318 aa10.01□□□□□ -0.81
SPG7-207ENST00000563218 FUT9Q9Y231 359 aa10.01□□□□□ -0.81
SPG7-207ENST00000563218 HECTD4Q9Y4D8 3996 aa10□□□□□ -0.81
SPG7-207ENST00000563218 PPP5D1E7EU14 171 aa10□□□□□ -0.81
SPG7-207ENST00000563218 TGOLN2O43493 480 aa10□□□□□ -0.81
SPG7-207ENST00000563218 EIF3GO75821 320 aaKnown RBP eCLIP10□□□□□ -0.81
SPG7-207ENST00000563218 CTSGP08311 255 aa10□□□□□ -0.81
SPG7-207ENST00000563218 TAS2R45P59539 299 aa10□□□□□ -0.81
SPG7-207ENST00000563218 SPATA31B1PQ5VZV4 182 aa10□□□□□ -0.81
SPG7-207ENST00000563218 ZNF600Q6ZNG1 722 aa10□□□□□ -0.81
SPG7-207ENST00000563218 IQCF2Q8IXL9 164 aa10□□□□□ -0.81
SPG7-207ENST00000563218 TMEM37Q8WXS4 190 aa10□□□□□ -0.81
SPG7-207ENST00000563218 CHRDL1Q9BU40 450 aa10□□□□□ -0.81
SPG7-207ENST00000563218 PBDC1Q9BVG4 233 aa10□□□□□ -0.81
SPG7-207ENST00000563218 SEPSECSQ9HD40 501 aaKnown RBP10□□□□□ -0.81
SPG7-207ENST00000563218 TECRQ9NZ01 308 aaKnown RBP10□□□□□ -0.81
SPG7-207ENST00000563218 HIGD1AQ9Y241 93 aa10□□□□□ -0.81
SPG7-207ENST00000563218 HERC2O95714 4834 aa10□□□□□ -0.81
SPG7-207ENST00000563218 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.99□□□□□ -0.81
SPG7-207ENST00000563218 OR2C1O95371 312 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 CXorf1O96002 111 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 IFNA1P01562 189 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 IL4P05112 153 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 STAG3L2P0CL84 134 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 STAG3L3P0CL85 134 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 ADMP35318 185 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 CCL20P78556 96 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 RELQ04864 619 aaPredicted RBP9.99□□□□□ -0.81
SPG7-207ENST00000563218 FAM209BQ5JX69 171 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 PATE2Q6UY27 113 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 MIR17HGQ75NE6 70 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 S100A7AQ86SG5 101 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 EIF4E3Q8N5X7 224 aaKnown RBP9.99□□□□□ -0.81
SPG7-207ENST00000563218 RNF125Q96EQ8 232 aa9.99□□□□□ -0.81
SPG7-207ENST00000563218 PEMTQ9UBM1 199 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms