RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	IGKV1OR2-108	A0A075B7D4	117 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092		A0A087WTM6	91 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	SNRPGP15	A8MWD9	76 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	BOLA2-SMG1P6	H3BVE0	249 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	TGFBR1	P36897	503 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	ATP5I	P56385	69 aa	Predicted RBP	5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	ERVFC1-1	P60608	527 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	IZUMO2	Q6UXV1	221 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092		Q6ZSN1	163 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	SELENOH	Q8IZQ5	122 aa	Known RBP	5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	OR13C8	Q8NGS7	320 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	TMEM263	Q8WUH6	116 aa	Known RBP	5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	RBPMS	Q93062	196 aa	Known RBP	5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	C16orf92	Q96LL3	132 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	TRGV9	Q99603	122 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	SLC25A32	Q9H2D1	315 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	NOP10	Q9NPE3	64 aa	Known RBP	5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	HSPB7	Q9UBY9	170 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	RAB26	Q9ULW5	256 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	TMEM56-RWDD3	S4R434	201 aa		5.67	□□□□□ -1.5
CKLF-208	ENST00000563092	TRAV12-2	A0A075B6T6	113 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092		A0A096LPF7	62 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	ZNF98	A6NK75	572 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	ZFP92	A6NM28	416 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	CEBPZOS	A8MTT3	80 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	APOA1	P02647	267 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	OR5AC1	P0C628	307 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	TBP	P20226	339 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	GALR1	P47211	349 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	LYZ	P61626	148 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	RNASE12	Q5GAN4	147 aa	Known RBP	5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	TMEM144	Q7Z5S9	345 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	CCDC71L	Q8N9Z2	235 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	THAP8	Q8NA92	274 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	TERB2	Q8NHR7	220 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	ZFAND1	Q8TCF1	268 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	VSIG2	Q96IQ7	327 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	LINC01587	Q99440	93 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	RTBDN	Q9BSG5	229 aa	Predicted RBP	5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	RSG1	Q9BU20	258 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	TMEM70	Q9BUB7	260 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	COPZ2	Q9P299	210 aa		5.66	□□□□□ -1.5
CKLF-208	ENST00000563092	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	5.65	□□□□□ -1.5
CKLF-208	ENST00000563092		A0A0J9YY99	117 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	SIVA1	O15304	175 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	CFD	P00746	253 aa	Predicted RBP	5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	IFNA5	P01569	189 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	CD3D	P04234	171 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	FABP1	P07148	127 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	DNAH10OS	P0CZ25	163 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	OR5I1	Q13606	314 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	MEF2D	Q14814	521 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	RNASE10	Q5GAN6	216 aa	Known RBP	5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	SERTAD4-AS1	Q5TG53	156 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	IGFL4	Q6B9Z1	124 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	SNX29P2	Q8IUI4	249 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	LGI3	Q8N145	548 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	RNF182	Q8N6D2	247 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	OR8A1	Q8NGG7	326 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	OR4D10	Q8NGI6	311 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	OR1B1	Q8NGR6	318 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	RNASE11	Q8TAA1	199 aa	Known RBP	5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	GPR82	Q96P67	336 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	C20orf144	Q9BQM9	153 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	TNFRSF18	Q9Y5U5	241 aa		5.65	□□□□□ -1.5
CKLF-208	ENST00000563092	LRP1	Q07954	4544 aa	Known RBP	5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	NPIPB6	E9PJ23	425 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092		H7BYZ3	331 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	ADAP1	O75689	374 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	SULT1A3	P0DMM9	295 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	SULT1A4	P0DMN0	295 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	GCSH	P23434	173 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	NFE4	Q86UQ8	179 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	MARCH1	Q8TCQ1	289 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	DTD1	Q8TEA8	209 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	IL22RA2	Q969J5	263 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	SLC35E1	Q96K37	410 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	VCX3B	Q9H321	246 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	NAA60	Q9H7X0	242 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	MTFP1	Q9UDX5	166 aa		5.64	□□□□□ -1.51
CKLF-208	ENST00000563092	SMIM31	A0A1B0GVY4	71 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	CRYM-AS1	A6NIL9	109 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	PRSS46	E5RG02	174 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	CXCL3	P19876	107 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	CDKN1B	P46527	198 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	DAZ2	Q13117	558 aa	Known RBP	5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	OR2F1	Q13607	317 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	SURF2	Q15527	256 aa	Predicted RBP	5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	GPR107	Q5VW38	600 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	TMEM268	Q5VZI3	342 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	GGNBP1	Q5YKI7	109 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	TMEM182	Q6ZP80	229 aa	Predicted RBP	5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	PPP1R14B	Q96C90	147 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	KRTAP9-8	Q9BYQ0	159 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	RBKS	Q9H477	322 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092	SLC25A22	Q9H936	323 aa		5.63	□□□□□ -1.51
CKLF-208	ENST00000563092		A0A087X0K7	114 aa		5.62	□□□□□ -1.51
CKLF-208	ENST00000563092	GAGE12B	A1L429	117 aa		5.62	□□□□□ -1.51
CKLF-208	ENST00000563092	ANKRD65	E5RJM6	399 aa		5.62	□□□□□ -1.51

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